RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	ANXA2R	Q3ZCQ2	193 aa		4.66	□□□□□ -1.66
HDAC9-223	ENST00000476135	PRR27	Q6MZM9	219 aa		4.66	□□□□□ -1.66
HDAC9-223	ENST00000476135	C5orf17	Q8NAS9	161 aa		4.66	□□□□□ -1.66
HDAC9-223	ENST00000476135	LINC01600	Q96MT4	127 aa		4.66	□□□□□ -1.66
HDAC9-223	ENST00000476135	NKX6-2	Q9C056	277 aa	Predicted RBP	4.66	□□□□□ -1.66
HDAC9-223	ENST00000476135	DPH3P1	Q9H4G8	78 aa		4.66	□□□□□ -1.66
HDAC9-223	ENST00000476135		Q9HAA7	133 aa		4.66	□□□□□ -1.66
HDAC9-223	ENST00000476135	ARL2-SNX15	V9GYD0	113 aa		4.66	□□□□□ -1.66
HDAC9-223	ENST00000476135	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.65	□□□□□ -1.67
HDAC9-223	ENST00000476135	IGHV3-38	A0A0C4DH36	116 aa		4.65	□□□□□ -1.67
HDAC9-223	ENST00000476135		A0A1W2PRE2	83 aa		4.65	□□□□□ -1.67
HDAC9-223	ENST00000476135	RBAKDN	A6NC62	111 aa		4.65	□□□□□ -1.67
HDAC9-223	ENST00000476135	PGP	A6NDG6	321 aa		4.65	□□□□□ -1.67
HDAC9-223	ENST00000476135	RBFOX3	A6NFN3	312 aa		4.65	□□□□□ -1.67
HDAC9-223	ENST00000476135	PRAC2	D3DTV9	90 aa		4.65	□□□□□ -1.67
HDAC9-223	ENST00000476135	IGKV2D-40	P01614	121 aa	Predicted RBP	4.65	□□□□□ -1.67
HDAC9-223	ENST00000476135	CDKN1B	P46527	198 aa		4.65	□□□□□ -1.67
HDAC9-223	ENST00000476135	CRYBA4	P53673	196 aa		4.65	□□□□□ -1.67
HDAC9-223	ENST00000476135	LBH	Q53QV2	105 aa	Predicted RBP	4.65	□□□□□ -1.67
HDAC9-223	ENST00000476135	LINC01556	Q5JQF7	62 aa		4.65	□□□□□ -1.67
HDAC9-223	ENST00000476135	SUN5	Q8TC36	379 aa		4.65	□□□□□ -1.67
HDAC9-223	ENST00000476135	SFT2D1	Q8WV19	159 aa		4.65	□□□□□ -1.67
HDAC9-223	ENST00000476135	LINC00477	Q96M19	166 aa		4.65	□□□□□ -1.67
HDAC9-223	ENST00000476135	TCEAL7	Q9BRU2	100 aa		4.65	□□□□□ -1.67
HDAC9-223	ENST00000476135	RPH3AL	Q9UNE2	315 aa		4.65	□□□□□ -1.67
HDAC9-223	ENST00000476135	TRBV7-9	A0A0J9YWB2	115 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	FBLL1	A6NHQ2	334 aa	Known RBP	4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	VCY	O14598	125 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	IFNA1	P01562	189 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	IFNA7	P01567	189 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	NMB	P08949	121 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	NPS	P0C0P6	89 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	SRI	P30626	198 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	FHIT	P49789	147 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	SULT1A2	P50226	295 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	ZNF138	P52744	262 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	NKX2-5	P52952	324 aa	Predicted RBP	4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	FGF8	P55075	233 aa	Predicted RBP	4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	UBE2G2	P60604	165 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	C9orf47	Q6ZRZ4	202 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	GOLT1A	Q6ZVE7	132 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	CYB561D1	Q8N8Q1	229 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	MBD3L1	Q8WWY6	194 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	NDFIP1	Q9BT67	221 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	MANBAL	Q9NQG1	85 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	HHLA3	Q9XRX5	114 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	LENEP	Q9Y5L5	61 aa		4.64	□□□□□ -1.67
HDAC9-223	ENST00000476135	C7orf71	A4D174	169 aa		4.63	□□□□□ -1.67
HDAC9-223	ENST00000476135	GGTLC3	B5MD39	225 aa		4.63	□□□□□ -1.67
HDAC9-223	ENST00000476135		F6UZH7	168 aa		4.63	□□□□□ -1.67
HDAC9-223	ENST00000476135		H0Y8G0	127 aa		4.63	□□□□□ -1.67
HDAC9-223	ENST00000476135	LECT2	O14960	151 aa		4.63	□□□□□ -1.67
HDAC9-223	ENST00000476135	TCRA	P04437	139 aa		4.63	□□□□□ -1.67
HDAC9-223	ENST00000476135	CT45A10	P0DMU9	189 aa		4.63	□□□□□ -1.67
HDAC9-223	ENST00000476135	CRISP2	P16562	243 aa		4.63	□□□□□ -1.67
HDAC9-223	ENST00000476135	KRTAP10-8	P60410	259 aa		4.63	□□□□□ -1.67
HDAC9-223	ENST00000476135	BLOC1S1	P78537	153 aa		4.63	□□□□□ -1.67
HDAC9-223	ENST00000476135	ERCC8	Q13216	396 aa		4.63	□□□□□ -1.67
HDAC9-223	ENST00000476135	GFI1B	Q5VTD9	330 aa		4.63	□□□□□ -1.67
HDAC9-223	ENST00000476135		Q8TAT8	98 aa		4.63	□□□□□ -1.67
HDAC9-223	ENST00000476135	HIST1H2BA	Q96A08	127 aa		4.63	□□□□□ -1.67
HDAC9-223	ENST00000476135	AGPAT4-IT1	Q9H0P7	198 aa		4.63	□□□□□ -1.67
HDAC9-223	ENST00000476135	ZNF492	Q9P255	531 aa		4.63	□□□□□ -1.67
HDAC9-223	ENST00000476135	TRGV1	A0A0A0MS02	117 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135	TRAV1-1	A0A0B4J248	108 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135		A0A1B0GV50	99 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135	FAM74A7	A6NL05	159 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135	KLLN	B2CW77	178 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135		C9JCJ5	164 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135		K7EQD1	137 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135	PEX7	O00628	323 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135	GPX1	P07203	203 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135	TAGLN2	P37802	199 aa	Known RBP	4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135	UBE2G1	P62253	170 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135	GNG5	P63218	68 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135	LAGE3	Q14657	143 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135	ALKAL2	Q6UX46	152 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135		Q8N976	141 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135	TMEM75	Q8N9X5	138 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135	FAM19A4	Q96LR4	140 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135	VGLL1	Q99990	258 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135	TXNDC17	Q9BRA2	123 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135	EPDR1	Q9UM22	224 aa		4.62	□□□□□ -1.67
HDAC9-223	ENST00000476135	TRAV12-3	A0A0B4J271	114 aa		4.61	□□□□□ -1.67
HDAC9-223	ENST00000476135		A0A0J9YXV3	536 aa		4.61	□□□□□ -1.67
HDAC9-223	ENST00000476135	SPINK4	O60575	86 aa		4.61	□□□□□ -1.67
HDAC9-223	ENST00000476135	AKR1C3	P42330	323 aa		4.61	□□□□□ -1.67
HDAC9-223	ENST00000476135	FLI1	Q01543	452 aa	Predicted RBP	4.61	□□□□□ -1.67
HDAC9-223	ENST00000476135	BTN1A1	Q13410	526 aa		4.61	□□□□□ -1.67
HDAC9-223	ENST00000476135	SAPCD1	Q5SSQ6	148 aa		4.61	□□□□□ -1.67
HDAC9-223	ENST00000476135		Q86TA4	180 aa		4.61	□□□□□ -1.67
HDAC9-223	ENST00000476135	ZNF680	Q8NEM1	530 aa		4.61	□□□□□ -1.67
HDAC9-223	ENST00000476135	PCNP	Q8WW12	178 aa	Known RBP	4.61	□□□□□ -1.67
HDAC9-223	ENST00000476135	FMC1	Q96HJ9	113 aa		4.61	□□□□□ -1.67
HDAC9-223	ENST00000476135	PYGO2	Q9BRQ0	406 aa		4.61	□□□□□ -1.67
HDAC9-223	ENST00000476135	GNG13	Q9P2W3	67 aa		4.61	□□□□□ -1.67
HDAC9-223	ENST00000476135	TRAV8-1	A0A0A6YYK1	113 aa		4.6	□□□□□ -1.67
HDAC9-223	ENST00000476135	TRAV21	A0A0B4J279	112 aa		4.6	□□□□□ -1.67
HDAC9-223	ENST00000476135	IGHV3-53	P01767	116 aa		4.6	□□□□□ -1.67

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