RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 M0R2N4 97 aa2.22□□□□□ -2.05
SRGAP3-205ENST00000475560 CCL25O15444 150 aa2.22□□□□□ -2.05
SRGAP3-205ENST00000475560 Q56UQ5 140 aa2.22□□□□□ -2.05
SRGAP3-205ENST00000475560 PCOTHQ58A44 107 aa2.22□□□□□ -2.05
SRGAP3-205ENST00000475560 FANCAO15360 1455 aa2.21□□□□□ -2.06
SRGAP3-205ENST00000475560 LOC110117498A0A087WWA1 95 aa2.21□□□□□ -2.06
SRGAP3-205ENST00000475560 ZNF609O15014 1411 aa2.21□□□□□ -2.06
SRGAP3-205ENST00000475560 PLXNA2O75051 1894 aa2.21□□□□□ -2.06
SRGAP3-205ENST00000475560 KLF7O75840 302 aaPredicted RBP2.21□□□□□ -2.06
SRGAP3-205ENST00000475560 NDUFB6O95139 128 aa2.21□□□□□ -2.06
SRGAP3-205ENST00000475560 PIPP12273 146 aaPredicted RBP2.21□□□□□ -2.06
SRGAP3-205ENST00000475560 IQGAP2Q13576 1575 aa2.21□□□□□ -2.06
SRGAP3-205ENST00000475560 SAMD9Q5K651 1589 aa2.21□□□□□ -2.06
SRGAP3-205ENST00000475560 LYPD5Q6UWN5 251 aa2.21□□□□□ -2.06
SRGAP3-205ENST00000475560 Q6ZS92 163 aa2.21□□□□□ -2.06
SRGAP3-205ENST00000475560 NRKQ7Z2Y5 1582 aa2.21□□□□□ -2.06
SRGAP3-205ENST00000475560 DEFB132Q7Z7B7 95 aa2.21□□□□□ -2.06
SRGAP3-205ENST00000475560 ZNF563Q8TA94 476 aa2.21□□□□□ -2.06
SRGAP3-205ENST00000475560 TMEM14CQ9P0S9 112 aa2.21□□□□□ -2.06
SRGAP3-205ENST00000475560 CPS1P31327 1500 aa2.21□□□□□ -2.06
SRGAP3-205ENST00000475560 PTPRFP10586 1907 aa2.21□□□□□ -2.06
SRGAP3-205ENST00000475560 ALPK3Q96L96 1907 aa2.21□□□□□ -2.06
SRGAP3-205ENST00000475560 ADGRL2O95490 1459 aa2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 MAGI2Q86UL8 1455 aa2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 UTRNP46939 3433 aa2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 DIP2AQ14689 1571 aa2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 EML5Q05BV3 1969 aa2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 BLMP54132 1417 aaPredicted RBP2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 NUPR2A6NF83 97 aa2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 IGLV3-1P01715 115 aa2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 TRAPPC2P0DI81 140 aa2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 TRAPPC2BP0DI82 140 aa2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 KRTAP6-3Q3LI67 103 aa2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 MRPL54Q6P161 138 aaKnown RBP2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 LINC00322Q6ZN03 302 aaPredicted RBP2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 Q9H521 79 aa2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 SNURFQ9Y675 71 aa2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 ZFYVE16Q7Z3T8 1539 aa2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 MUC4Q99102 2169 aa2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 EP400Q96L91 3159 aa2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 ARHGAP35Q9NRY4 1499 aa2.2□□□□□ -2.06
SRGAP3-205ENST00000475560 EHBP1L1Q8N3D4 1523 aa2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 FN1P02751 2386 aaKnown RBP2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 IGLV3-32A0A0A0MS00 114 aa2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 CXorf51AA0A1B0GTR3 108 aa2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 APOC4-APOC2K7ER74 178 aa2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 SNCGO76070 127 aa2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 APOC2P02655 101 aa2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 SLC25A6P12236 298 aa2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 CATR1Q13166 79 aa2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 SLC48A1Q6P1K1 146 aa2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 DMAC1Q96GE9 116 aa2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 WFDC10AQ9H1F0 79 aa2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 RPRMQ9NS64 109 aa2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 C22orf24Q9Y442 160 aa2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 IER3IP1Q9Y5U9 82 aa2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 SETXQ7Z333 2677 aaKnown RBP2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 TNRC6BQ9UPQ9 1833 aaKnown RBP2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 RP1P56715 2156 aa2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 TNRC18O15417 2968 aaPredicted RBP2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 ADAMTS12P58397 1594 aa2.19□□□□□ -2.06
SRGAP3-205ENST00000475560 CR1P17927 2039 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 URB2Q14146 1524 aaKnown RBP2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 DUOX2Q9NRD8 1548 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 LRP6O75581 1613 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 CLTCL1P53675 1640 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 LRRIQ1Q96JM4 1722 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 IGKV3-7A0A075B6H7 116 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 TRBV10-1A0A0K0K1A3 114 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 PDE6GP18545 87 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 GNG11P61952 73 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 IQCJQ1A5X6 159 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 C9orf153Q5TBE3 101 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 C12orf73Q69YU5 71 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 UNQ6190/PRO20217Q6UXQ8 127 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 GTF2H5Q6ZYL4 71 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 S100ZQ8WXG8 99 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 TMEM141Q96I45 108 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 ODF3Q96PU9 254 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 AP4S1Q9Y587 144 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 ATP7BP35670 1465 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 MLH3Q9UHC1 1453 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 FREM3P0C091 2139 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 BDP1A6H8Y1 2624 aa2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 MYH9P35579 1960 aaKnown RBP2.18□□□□□ -2.06
SRGAP3-205ENST00000475560 KIAA0586Q9BVV6 1533 aa2.17□□□□□ -2.06
SRGAP3-205ENST00000475560 ABCA9Q8IUA7 1624 aa2.17□□□□□ -2.06
SRGAP3-205ENST00000475560 PHRF1Q9P1Y6 1649 aaKnown RBP2.17□□□□□ -2.06
SRGAP3-205ENST00000475560 KIF20BQ96Q89 1820 aa2.17□□□□□ -2.06
SRGAP3-205ENST00000475560 IGHV3-30P01768 117 aa2.17□□□□□ -2.06
SRGAP3-205ENST00000475560 GYPBP06028 91 aa2.17□□□□□ -2.06
SRGAP3-205ENST00000475560 IGHV3-30-5P0DP03 117 aa2.17□□□□□ -2.06
SRGAP3-205ENST00000475560 C4orf33Q8N1A6 199 aa2.17□□□□□ -2.06
SRGAP3-205ENST00000475560 SPANXDQ9BXN6 97 aa2.17□□□□□ -2.06
SRGAP3-205ENST00000475560 ATG5Q9H1Y0 275 aa2.17□□□□□ -2.06
SRGAP3-205ENST00000475560 MRPL36Q9P0J6 103 aaKnown RBP2.17□□□□□ -2.06
SRGAP3-205ENST00000475560 GLI2P10070 1586 aa2.17□□□□□ -2.06
SRGAP3-205ENST00000475560 A0A1B0GUL6 1792 aa2.17□□□□□ -2.06
SRGAP3-205ENST00000475560 LAMB1P07942 1786 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms