RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 ATG5Q9H1Y0 275 aa1.68□□□□□ -2.14
TM9SF3-204ENST00000475401 MRPL35Q9NZE8 188 aaKnown RBP1.68□□□□□ -2.14
TM9SF3-204ENST00000475401 ZNF142P52746 1687 aaPredicted RBP1.67□□□□□ -2.14
TM9SF3-204ENST00000475401 DAPK1P53355 1430 aa1.67□□□□□ -2.14
TM9SF3-204ENST00000475401 ZFYVE16Q7Z3T8 1539 aa1.67□□□□□ -2.14
TM9SF3-204ENST00000475401 PIPP12273 146 aaPredicted RBP1.67□□□□□ -2.14
TM9SF3-204ENST00000475401 CATR1Q13166 79 aa1.67□□□□□ -2.14
TM9SF3-204ENST00000475401 SPATA45Q537H7 98 aa1.67□□□□□ -2.14
TM9SF3-204ENST00000475401 C9orf116Q5BN46 136 aaPredicted RBP1.67□□□□□ -2.14
TM9SF3-204ENST00000475401 SLC48A1Q6P1K1 146 aa1.67□□□□□ -2.14
TM9SF3-204ENST00000475401 Q8N8P6 123 aa1.67□□□□□ -2.14
TM9SF3-204ENST00000475401 SMARCA2P51531 1590 aa1.67□□□□□ -2.14
TM9SF3-204ENST00000475401 MAPKBP1O60336 1514 aa1.66□□□□□ -2.14
TM9SF3-204ENST00000475401 TRBV6-7A0A0A0MS04 114 aa1.66□□□□□ -2.14
TM9SF3-204ENST00000475401 SNAPC5O75971 98 aa1.66□□□□□ -2.14
TM9SF3-204ENST00000475401 C12orf73Q69YU5 71 aa1.66□□□□□ -2.14
TM9SF3-204ENST00000475401 FCGBPQ9Y6R7 5405 aaPredicted RBP1.65□□□□□ -2.14
TM9SF3-204ENST00000475401 RP1L1Q8IWN7 2480 aaPredicted RBP1.65□□□□□ -2.14
TM9SF3-204ENST00000475401 HIGD1CA8MV81 97 aa1.65□□□□□ -2.15
TM9SF3-204ENST00000475401 CBLN1P23435 193 aa1.65□□□□□ -2.15
TM9SF3-204ENST00000475401 MRPL54Q6P161 138 aaKnown RBP1.65□□□□□ -2.15
TM9SF3-204ENST00000475401 DLEC1Q9Y238 1755 aa1.64□□□□□ -2.15
TM9SF3-204ENST00000475401 NRKQ7Z2Y5 1582 aa1.64□□□□□ -2.15
TM9SF3-204ENST00000475401 KTN1Q86UP2 1357 aaKnown RBP1.64□□□□□ -2.15
TM9SF3-204ENST00000475401 OOSP1A8MZH6 123 aa1.64□□□□□ -2.15
TM9SF3-204ENST00000475401 SNCGO76070 127 aa1.64□□□□□ -2.15
TM9SF3-204ENST00000475401 CCKP06307 115 aa1.64□□□□□ -2.15
TM9SF3-204ENST00000475401 PRB4P10163 310 aaPredicted RBP1.64□□□□□ -2.15
TM9SF3-204ENST00000475401 UBE2G1P62253 170 aa1.64□□□□□ -2.15
TM9SF3-204ENST00000475401 TSKUQ8WUA8 353 aa1.64□□□□□ -2.15
TM9SF3-204ENST00000475401 IFI27L1Q96BM0 104 aa1.64□□□□□ -2.15
TM9SF3-204ENST00000475401 MRPL57Q9BQC6 102 aaKnown RBP1.64□□□□□ -2.15
TM9SF3-204ENST00000475401 TET1Q8NFU7 2136 aa1.64□□□□□ -2.15
TM9SF3-204ENST00000475401 IFT140Q96RY7 1462 aa1.63□□□□□ -2.15
TM9SF3-204ENST00000475401 CDK12Q9NYV4 1490 aaPredicted RBP1.63□□□□□ -2.15
TM9SF3-204ENST00000475401 TRAV23DV6A0A075B6W5 121 aa1.63□□□□□ -2.15
TM9SF3-204ENST00000475401 NBDYA0A0U1RRE5 68 aa1.63□□□□□ -2.15
TM9SF3-204ENST00000475401 TFF1P04155 84 aa1.63□□□□□ -2.15
TM9SF3-204ENST00000475401 FXYD4P59646 89 aa1.63□□□□□ -2.15
TM9SF3-204ENST00000475401 RPL37AP61513 92 aaKnown RBP1.63□□□□□ -2.15
TM9SF3-204ENST00000475401 HSD52Q0P140 79 aa1.63□□□□□ -2.15
TM9SF3-204ENST00000475401 C10orf105Q8TEF2 133 aa1.63□□□□□ -2.15
TM9SF3-204ENST00000475401 AMELYQ99218 206 aa1.63□□□□□ -2.15
TM9SF3-204ENST00000475401 SDK1Q7Z5N4 2213 aa1.63□□□□□ -2.15
TM9SF3-204ENST00000475401 ROBO1Q9Y6N7 1651 aa1.62□□□□□ -2.15
TM9SF3-204ENST00000475401 IGKV2-40A0A087WW87 121 aaPredicted RBP1.62□□□□□ -2.15
TM9SF3-204ENST00000475401 IGKV2D-40P01614 121 aaPredicted RBP1.62□□□□□ -2.15
TM9SF3-204ENST00000475401 IL9P15248 144 aa1.62□□□□□ -2.15
TM9SF3-204ENST00000475401 IQCJQ1A5X6 159 aa1.62□□□□□ -2.15
TM9SF3-204ENST00000475401 C9orf153Q5TBE3 101 aa1.62□□□□□ -2.15
TM9SF3-204ENST00000475401 ACBD7Q8N6N7 88 aa1.62□□□□□ -2.15
TM9SF3-204ENST00000475401 MED13Q9UHV7 2174 aa1.62□□□□□ -2.15
TM9SF3-204ENST00000475401 E9PCH4 1651 aa1.61□□□□□ -2.15
TM9SF3-204ENST00000475401 TRAV30A0A087WSZ9 112 aa1.61□□□□□ -2.15
TM9SF3-204ENST00000475401 TRAV12-3A0A0B4J271 114 aa1.61□□□□□ -2.15
TM9SF3-204ENST00000475401 S100A8P05109 93 aa1.61□□□□□ -2.15
TM9SF3-204ENST00000475401 NPC2P61916 151 aa1.61□□□□□ -2.15
TM9SF3-204ENST00000475401 INSL4Q14641 139 aa1.61□□□□□ -2.15
TM9SF3-204ENST00000475401 DSCR8Q96T75 97 aa1.61□□□□□ -2.15
TM9SF3-204ENST00000475401 KDM6BO15054 1643 aa1.61□□□□□ -2.15
TM9SF3-204ENST00000475401 RBBP6Q7Z6E9 1792 aaKnown RBP1.6□□□□□ -2.15
TM9SF3-204ENST00000475401 LOC101927531A0A1B0GV80 90 aa1.6□□□□□ -2.15
TM9SF3-204ENST00000475401 TMEM218A2RU14 115 aa1.6□□□□□ -2.15
TM9SF3-204ENST00000475401 XAF1Q6GPH4 301 aa1.6□□□□□ -2.15
TM9SF3-204ENST00000475401 C8orf59Q8N0T1 100 aaPredicted RBP1.6□□□□□ -2.15
TM9SF3-204ENST00000475401 C10orf82Q8WW14 230 aa1.6□□□□□ -2.15
TM9SF3-204ENST00000475401 FLG2Q5D862 2391 aaPredicted RBP1.6□□□□□ -2.15
TM9SF3-204ENST00000475401 PEAK1Q9H792 1746 aa1.6□□□□□ -2.15
TM9SF3-204ENST00000475401 CITO14578 2027 aa1.59□□□□□ -2.15
TM9SF3-204ENST00000475401 BLMP54132 1417 aaPredicted RBP1.59□□□□□ -2.15
TM9SF3-204ENST00000475401 CNTLNQ9NXG0 1405 aa1.59□□□□□ -2.15
TM9SF3-204ENST00000475401 RREB1Q92766 1687 aa1.59□□□□□ -2.15
TM9SF3-204ENST00000475401 TEX49A0A1B0GTD5 131 aa1.59□□□□□ -2.15
TM9SF3-204ENST00000475401 LYNX1P0DP58 116 aa1.59□□□□□ -2.15
TM9SF3-204ENST00000475401 IFITM1P13164 125 aa1.59□□□□□ -2.15
TM9SF3-204ENST00000475401 CCL8P80075 99 aa1.59□□□□□ -2.15
TM9SF3-204ENST00000475401 FXYD3Q14802 87 aa1.59□□□□□ -2.15
TM9SF3-204ENST00000475401 S100A7L2Q5SY68 101 aa1.59□□□□□ -2.15
TM9SF3-204ENST00000475401 GTF2H5Q6ZYL4 71 aa1.59□□□□□ -2.15
TM9SF3-204ENST00000475401 ZGRF1Q86YA3 2104 aa1.58□□□□□ -2.16
TM9SF3-204ENST00000475401 SPHKAPQ2M3C7 1700 aa1.58□□□□□ -2.16
TM9SF3-204ENST00000475401 TRBV10-3A0A0K0K1G6 114 aa1.58□□□□□ -2.16
TM9SF3-204ENST00000475401 TCRBV3S1A0A5B6 114 aa1.58□□□□□ -2.16
TM9SF3-204ENST00000475401 A6NIN4 97 aa1.58□□□□□ -2.16
TM9SF3-204ENST00000475401 IFNA17P01571 189 aa1.58□□□□□ -2.16
TM9SF3-204ENST00000475401 C5orf38Q86SI9 138 aa1.58□□□□□ -2.16
TM9SF3-204ENST00000475401 C5orf56Q8N8D9 126 aa1.58□□□□□ -2.16
TM9SF3-204ENST00000475401 CACNA1BQ00975 2339 aa1.58□□□□□ -2.16
TM9SF3-204ENST00000475401 PLXNA1Q9UIW2 1896 aa1.58□□□□□ -2.16
TM9SF3-204ENST00000475401 SHROOM2Q13796 1616 aa1.58□□□□□ -2.16
TM9SF3-204ENST00000475401 CPSF1Q10570 1443 aaKnown RBP1.57□□□□□ -2.16
TM9SF3-204ENST00000475401 PATJQ8NI35 1801 aa1.57□□□□□ -2.16
TM9SF3-204ENST00000475401 SPINK8P0C7L1 97 aa1.57□□□□□ -2.16
TM9SF3-204ENST00000475401 UBE2D1P51668 147 aa1.57□□□□□ -2.16
TM9SF3-204ENST00000475401 RBM3P98179 157 aaKnown RBP1.57□□□□□ -2.16
TM9SF3-204ENST00000475401 RPL7L1Q6DKI1 246 aaKnown RBP1.57□□□□□ -2.16
TM9SF3-204ENST00000475401 SVBPQ8N300 66 aa1.57□□□□□ -2.16
TM9SF3-204ENST00000475401 DPH3P1Q9H4G8 78 aa1.57□□□□□ -2.16
TM9SF3-204ENST00000475401 PIGBOS1A0A0B4J2F0 54 aa1.56□□□□□ -2.16
TM9SF3-204ENST00000475401 CLPSL1A2RUU4 121 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms