RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 SRSF9Q13242 221 aaKnown RBP eCLIP9.87□□□□□ -0.83
CCNL1-216ENST00000475298 CSMD2Q7Z408 3487 aa9.86□□□□□ -0.83
CCNL1-216ENST00000475298 C5orf56Q8N8D9 126 aa9.86□□□□□ -0.83
CCNL1-216ENST00000475298 TRGV3P03979 118 aa9.86□□□□□ -0.83
CCNL1-216ENST00000475298 SLC25A16P16260 332 aa9.86□□□□□ -0.83
CCNL1-216ENST00000475298 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.86□□□□□ -0.83
CCNL1-216ENST00000475298 SCGB1D4Q6XE38 83 aa9.86□□□□□ -0.83
CCNL1-216ENST00000475298 Q8N1Y9 231 aa9.86□□□□□ -0.83
CCNL1-216ENST00000475298 TRAV26-2A0A0B4J265 109 aa9.85□□□□□ -0.83
CCNL1-216ENST00000475298 C9JAW5 83 aa9.85□□□□□ -0.83
CCNL1-216ENST00000475298 ORM1P02763 201 aa9.85□□□□□ -0.83
CCNL1-216ENST00000475298 C10orf126Q8N4M7 172 aa9.85□□□□□ -0.83
CCNL1-216ENST00000475298 NEXN-AS1Q8NBZ9 246 aa9.85□□□□□ -0.83
CCNL1-216ENST00000475298 KLHL30-AS1Q8NEE0 82 aa9.85□□□□□ -0.83
CCNL1-216ENST00000475298 SPANXA1Q9NS26 97 aa9.85□□□□□ -0.83
CCNL1-216ENST00000475298 IL17RELQ6ZVW7 336 aa9.85□□□□□ -0.83
CCNL1-216ENST00000475298 TRPT1Q86TN4 253 aaKnown RBP9.85□□□□□ -0.83
CCNL1-216ENST00000475298 C3orf56Q8N813 242 aa9.85□□□□□ -0.83
CCNL1-216ENST00000475298 C15orf53Q8NAA6 179 aa9.85□□□□□ -0.83
CCNL1-216ENST00000475298 IGHV4-61A0A0C4DH41 118 aa9.84□□□□□ -0.83
CCNL1-216ENST00000475298 J3KRW8 73 aa9.84□□□□□ -0.83
CCNL1-216ENST00000475298 ATP5J2P56134 94 aa9.84□□□□□ -0.83
CCNL1-216ENST00000475298 SRSF2Q01130 221 aaKnown RBP9.84□□□□□ -0.83
CCNL1-216ENST00000475298 OR10J6PQ8NGY7 276 aa9.84□□□□□ -0.83
CCNL1-216ENST00000475298 LINC01587Q99440 93 aa9.84□□□□□ -0.83
CCNL1-216ENST00000475298 A0A0J9YY99 117 aa9.83□□□□□ -0.84
CCNL1-216ENST00000475298 NTN5Q8WTR8 489 aaPredicted RBP9.83□□□□□ -0.84
CCNL1-216ENST00000475298 EEF1AKMT3Q96AZ1 226 aa9.83□□□□□ -0.84
CCNL1-216ENST00000475298 USP9XQ93008 2570 aaPredicted RBP9.82□□□□□ -0.84
CCNL1-216ENST00000475298 IGHV3-30P01768 117 aa9.82□□□□□ -0.84
CCNL1-216ENST00000475298 IGHV3-30-5P0DP03 117 aa9.82□□□□□ -0.84
CCNL1-216ENST00000475298 IGSF10Q6WRI0 2623 aa9.82□□□□□ -0.84
CCNL1-216ENST00000475298 IGHV4-38-2P0DP08 117 aa9.82□□□□□ -0.84
CCNL1-216ENST00000475298 LY6EQ16553 131 aa9.82□□□□□ -0.84
CCNL1-216ENST00000475298 KLK9Q2XQG4 91 aa9.82□□□□□ -0.84
CCNL1-216ENST00000475298 Q6ZS46 218 aa9.82□□□□□ -0.84
CCNL1-216ENST00000475298 TMEM126AQ9H061 195 aa9.82□□□□□ -0.84
CCNL1-216ENST00000475298 KLK9Q9UKQ9 250 aa9.82□□□□□ -0.84
CCNL1-216ENST00000475298 TRAV41A0A0B4J266 112 aa9.81□□□□□ -0.84
CCNL1-216ENST00000475298 EIF4EBP3O60516 100 aaPredicted RBP9.81□□□□□ -0.84
CCNL1-216ENST00000475298 TRBV12-3P01733 135 aa9.81□□□□□ -0.84
CCNL1-216ENST00000475298 NRGNQ92686 78 aa9.81□□□□□ -0.84
CCNL1-216ENST00000475298 AGPAT4-IT1Q9H0P7 198 aa9.81□□□□□ -0.84
CCNL1-216ENST00000475298 KLK15Q9H2R5 256 aa9.81□□□□□ -0.84
CCNL1-216ENST00000475298 PRO1854Q9UHT4 67 aa9.81□□□□□ -0.84
CCNL1-216ENST00000475298 MOB4Q9Y3A3 225 aa9.81□□□□□ -0.84
CCNL1-216ENST00000475298 CSDC2Q9Y534 153 aaKnown RBP9.81□□□□□ -0.84
CCNL1-216ENST00000475298 IGHV1-69DA0A0B4J2H0 117 aa9.81□□□□□ -0.84
CCNL1-216ENST00000475298 TEX49A0A1B0GTD5 131 aa9.81□□□□□ -0.84
CCNL1-216ENST00000475298 IGHV1-69P01742 117 aa9.81□□□□□ -0.84
CCNL1-216ENST00000475298 SCGB3A1Q96QR1 104 aa9.81□□□□□ -0.84
CCNL1-216ENST00000475298 METTL26Q96S19 204 aa9.81□□□□□ -0.84
CCNL1-216ENST00000475298 CHCHD5Q9BSY4 110 aa9.81□□□□□ -0.84
CCNL1-216ENST00000475298 C11orf21Q9P2W6 132 aa9.81□□□□□ -0.84
CCNL1-216ENST00000475298 TRBV7-1A0A0A6YYK4 115 aa9.8□□□□□ -0.84
CCNL1-216ENST00000475298 BAALCQ8WXS3 180 aa9.8□□□□□ -0.84
CCNL1-216ENST00000475298 TOMM6Q96B49 74 aa9.8□□□□□ -0.84
CCNL1-216ENST00000475298 TRAV8-4A0A0B4J246 113 aa9.8□□□□□ -0.84
CCNL1-216ENST00000475298 ELANEP08246 267 aa9.8□□□□□ -0.84
CCNL1-216ENST00000475298 RPL13AP40429 203 aaKnown RBP9.8□□□□□ -0.84
CCNL1-216ENST00000475298 LINC01600Q96MT4 127 aa9.8□□□□□ -0.84
CCNL1-216ENST00000475298 IGKV3D-20A0A0C4DH25 116 aa9.79□□□□□ -0.84
CCNL1-216ENST00000475298 UNQ9165/PRO28630Q6UXU0 137 aa9.79□□□□□ -0.84
CCNL1-216ENST00000475298 CCL19Q99731 98 aa9.79□□□□□ -0.84
CCNL1-216ENST00000475298 SLC50A1Q9BRV3 221 aa9.79□□□□□ -0.84
CCNL1-216ENST00000475298 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.79□□□□□ -0.841e-7■■■■□ 20.9
CCNL1-216ENST00000475298 C19orf54Q5BKX5 351 aa9.79□□□□□ -0.84
CCNL1-216ENST00000475298 PIMREGQ9BSJ6 248 aa9.79□□□□□ -0.84
CCNL1-216ENST00000475298 SMIM2Q9BVW6 85 aa9.79□□□□□ -0.84
CCNL1-216ENST00000475298 IGHV4-30-2A0A087WSY4 118 aa9.78□□□□□ -0.84
CCNL1-216ENST00000475298 IGHV3-11P01762 117 aa9.78□□□□□ -0.84
CCNL1-216ENST00000475298 DEFB1P60022 68 aa9.78□□□□□ -0.84
CCNL1-216ENST00000475298 IGHV3-33P01772 117 aa9.78□□□□□ -0.84
CCNL1-216ENST00000475298 SLC25A29Q8N8R3 303 aa9.78□□□□□ -0.84
CCNL1-216ENST00000475298 C10orf105Q8TEF2 133 aa9.78□□□□□ -0.84
CCNL1-216ENST00000475298 U3KQE9 123 aa9.78□□□□□ -0.84
CCNL1-216ENST00000475298 CSPG4Q6UVK1 2322 aa9.77□□□□□ -0.85
CCNL1-216ENST00000475298 TRAV2A0A0B4J234 112 aa9.77□□□□□ -0.85
CCNL1-216ENST00000475298 RBAKDNA6NC62 111 aa9.77□□□□□ -0.85
CCNL1-216ENST00000475298 TSPEAR-AS2P59090 65 aa9.77□□□□□ -0.85
CCNL1-216ENST00000475298 C20orf173Q96LM9 149 aa9.77□□□□□ -0.85
CCNL1-216ENST00000475298 MYO18BQ8IUG5 2567 aa9.77□□□□□ -0.85
CCNL1-216ENST00000475298 DOPEY1Q5JWR5 2465 aa9.77□□□□□ -0.85
CCNL1-216ENST00000475298 H3BUX3 64 aa9.77□□□□□ -0.85
CCNL1-216ENST00000475298 LGALS9O00182 355 aa9.77□□□□□ -0.85
CCNL1-216ENST00000475298 DUSP14O95147 198 aaKnown RBP9.77□□□□□ -0.85
CCNL1-216ENST00000475298 IGF1P05019 195 aa9.77□□□□□ -0.85
CCNL1-216ENST00000475298 CRYGDP07320 174 aa9.77□□□□□ -0.85
CCNL1-216ENST00000475298 LINC00694P0DN24 101 aa9.77□□□□□ -0.85
CCNL1-216ENST00000475298 C16orf92Q96LL3 132 aa9.77□□□□□ -0.85
CCNL1-216ENST00000475298 IGHV7-4-1A0A0J9YVY3 117 aa9.76□□□□□ -0.85
CCNL1-216ENST00000475298 P0DMU3 169 aa9.76□□□□□ -0.85
CCNL1-216ENST00000475298 FAM231AP0DMU4 169 aa9.76□□□□□ -0.85
CCNL1-216ENST00000475298 FAM231CP0DMU5 169 aa9.76□□□□□ -0.85
CCNL1-216ENST00000475298 BLCAPP62952 87 aa9.76□□□□□ -0.85
CCNL1-216ENST00000475298 LINC01620Q4KN68 170 aa9.76□□□□□ -0.85
CCNL1-216ENST00000475298 PRR9Q5T870 116 aa9.76□□□□□ -0.85
CCNL1-216ENST00000475298 DNAJC30Q96LL9 226 aa9.76□□□□□ -0.85
CCNL1-216ENST00000475298 C5orf47Q569G3 176 aa9.75□□□□□ -0.85
CCNL1-216ENST00000475298 TMEM263Q8WUH6 116 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms