RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 IL17DQ8TAD2 202 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 METTL26Q96S19 204 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 RETNQ9HD89 108 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 MRPL36Q9P0J6 103 aaKnown RBP8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 RCL1Q9Y2P8 373 aaKnown RBP8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 PRSS29PA6NIE9 313 aa8.53□□□□□ -1.04
HLA-DOB-208ENST00000475235 H3BUT2 72 aa8.53□□□□□ -1.04
HLA-DOB-208ENST00000475235 MLANAQ16655 118 aa8.53□□□□□ -1.04
HLA-DOB-208ENST00000475235 NRN1Q9NPD7 142 aa8.53□□□□□ -1.04
HLA-DOB-208ENST00000475235 IGHV3OR16-13A0A075B7E8 117 aa8.52□□□□□ -1.05
HLA-DOB-208ENST00000475235 IGHV3-74A0A0B4J1X5 117 aa8.52□□□□□ -1.05
HLA-DOB-208ENST00000475235 TRAV2A0A0B4J234 112 aa8.52□□□□□ -1.05
HLA-DOB-208ENST00000475235 LOC107984640A0A0U1RRK4 108 aa8.52□□□□□ -1.05
HLA-DOB-208ENST00000475235 SYS1-DBNDD2H3BUS1 97 aa8.52□□□□□ -1.05
HLA-DOB-208ENST00000475235 IGKV1-17P01599 117 aa8.52□□□□□ -1.05
HLA-DOB-208ENST00000475235 ICAM4Q14773 271 aa8.52□□□□□ -1.05
HLA-DOB-208ENST00000475235 RPL7L1Q6DKI1 246 aaKnown RBP8.52□□□□□ -1.05
HLA-DOB-208ENST00000475235 CYP2G1PQ6ZSU1 146 aa8.52□□□□□ -1.05
HLA-DOB-208ENST00000475235 IGKV3-7A0A075B6H7 116 aa8.51□□□□□ -1.05
HLA-DOB-208ENST00000475235 NDUFC2O95298 119 aa8.51□□□□□ -1.05
HLA-DOB-208ENST00000475235 APOHP02749 345 aaPredicted RBP8.51□□□□□ -1.05
HLA-DOB-208ENST00000475235 SLC25A5P05141 298 aaKnown RBP8.51□□□□□ -1.05
HLA-DOB-208ENST00000475235 CRISP2P16562 243 aa8.51□□□□□ -1.05
HLA-DOB-208ENST00000475235 RPL11P62913 178 aaKnown RBP8.51□□□□□ -1.05
HLA-DOB-208ENST00000475235 STPG3Q8N7X2 389 aa8.51□□□□□ -1.05
HLA-DOB-208ENST00000475235 C9orf85Q96MD7 179 aa8.51□□□□□ -1.05
HLA-DOB-208ENST00000475235 JPT2Q9H910 190 aa8.51□□□□□ -1.05
HLA-DOB-208ENST00000475235 RYR3Q15413 4870 aa8.51□□□□□ -1.05
HLA-DOB-208ENST00000475235 IGHV3-66A0A0C4DH42 116 aa8.5□□□□□ -1.05
HLA-DOB-208ENST00000475235 UQCRQO14949 82 aa8.5□□□□□ -1.05
HLA-DOB-208ENST00000475235 DPM2O94777 84 aa8.5□□□□□ -1.05
HLA-DOB-208ENST00000475235 RPL13AP40429 203 aaKnown RBP8.5□□□□□ -1.05
HLA-DOB-208ENST00000475235 Q5XG85 94 aa8.5□□□□□ -1.05
HLA-DOB-208ENST00000475235 NPIPB3Q92617 1050 aa8.5□□□□□ -1.05
HLA-DOB-208ENST00000475235 RAB37Q96AX2 223 aa8.5□□□□□ -1.05
HLA-DOB-208ENST00000475235 RNASE7Q9H1E1 156 aaKnown RBP8.5□□□□□ -1.05
HLA-DOB-208ENST00000475235 DNAH7Q8WXX0 4024 aa8.5□□□□□ -1.05
HLA-DOB-208ENST00000475235 A0A087WWL8 130 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 USP17L23D6RBM5 183 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 NUPR1O60356 82 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 SERF1AO75920 110 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 SNCGO76070 127 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 C3orf79P0CE67 100 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 WFDC3Q8IUB2 231 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 KCNS1Q96KK3 526 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 RARRES2Q99969 163 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 OVOL2Q9BRP0 275 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 MAP6D1Q9H9H5 199 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 LOC102723971A0A1B0GUV8 181 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 SPRY2O43597 315 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 DUSP14O95147 198 aaKnown RBP8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 APOMO95445 188 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 IL4P05112 153 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 TMEM258P61165 79 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 HERVK_113P63121 156 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 LRRC37A5PQ49AS3 106 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 PPDPFLQ8WWR9 84 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 LINC00526Q96FQ7 95 aa8.49□□□□□ -1.05
HLA-DOB-208ENST00000475235 M0R2P5 195 aa8.48□□□□□ -1.05
HLA-DOB-208ENST00000475235 SYNGR2O43760 224 aa8.48□□□□□ -1.05
HLA-DOB-208ENST00000475235 SLC38A11Q08AI6 406 aa8.48□□□□□ -1.05
HLA-DOB-208ENST00000475235 DEFB135Q30KP9 77 aa8.48□□□□□ -1.05
HLA-DOB-208ENST00000475235 SPATA12Q7Z6I5 190 aa8.48□□□□□ -1.05
HLA-DOB-208ENST00000475235 TRPT1Q86TN4 253 aaKnown RBP8.48□□□□□ -1.05
HLA-DOB-208ENST00000475235 C3orf22Q8N5N4 141 aa8.48□□□□□ -1.05
HLA-DOB-208ENST00000475235 C20orf78Q9BR46 151 aa8.48□□□□□ -1.05
HLA-DOB-208ENST00000475235 U3KQE9 123 aa8.48□□□□□ -1.05
HLA-DOB-208ENST00000475235 ZFP92A6NM28 416 aa8.47□□□□□ -1.05
HLA-DOB-208ENST00000475235 ZNF324O75467 553 aaPredicted RBP8.47□□□□□ -1.05
HLA-DOB-208ENST00000475235 MT-ND6P03923 174 aa8.47□□□□□ -1.05
HLA-DOB-208ENST00000475235 IAPPP10997 89 aa8.47□□□□□ -1.05
HLA-DOB-208ENST00000475235 GATA1P15976 413 aaPredicted RBP8.47□□□□□ -1.05
HLA-DOB-208ENST00000475235 NMUP48645 174 aa8.47□□□□□ -1.05
HLA-DOB-208ENST00000475235 PSMB3P49720 205 aa8.47□□□□□ -1.05
HLA-DOB-208ENST00000475235 LINC00310P59036 64 aa8.47□□□□□ -1.05
HLA-DOB-208ENST00000475235 DEFB131AP59861 70 aa8.47□□□□□ -1.05
HLA-DOB-208ENST00000475235 GAGE13Q4V321 117 aa8.47□□□□□ -1.05
HLA-DOB-208ENST00000475235 PSMG4Q5JS54 123 aa8.47□□□□□ -1.05
HLA-DOB-208ENST00000475235 HRCT1Q6UXD1 115 aa8.47□□□□□ -1.05
HLA-DOB-208ENST00000475235 BAGE3Q86Y29 109 aa8.47□□□□□ -1.05
HLA-DOB-208ENST00000475235 BAGE2Q86Y30 109 aa8.47□□□□□ -1.05
HLA-DOB-208ENST00000475235 C16orf92Q96LL3 132 aa8.47□□□□□ -1.05
HLA-DOB-208ENST00000475235 TP53TG3Q9ULZ0 132 aa8.47□□□□□ -1.05
HLA-DOB-208ENST00000475235 K7EQG2 157 aa8.46□□□□□ -1.05
HLA-DOB-208ENST00000475235 RRN3P1Q2M238 152 aa8.46□□□□□ -1.05
HLA-DOB-208ENST00000475235 IBA57Q5T440 356 aaKnown RBP8.46□□□□□ -1.05
HLA-DOB-208ENST00000475235 BPIFA4PQ86YQ2 179 aa8.46□□□□□ -1.05
HLA-DOB-208ENST00000475235 GATAD1Q8WUU5 269 aa8.46□□□□□ -1.05
HLA-DOB-208ENST00000475235 GTSF1Q8WW33 167 aa8.46□□□□□ -1.05
HLA-DOB-208ENST00000475235 C2orf50Q96LR7 162 aa8.46□□□□□ -1.05
HLA-DOB-208ENST00000475235 PRELID3AQ96N28 172 aa8.46□□□□□ -1.05
HLA-DOB-208ENST00000475235 SCRT2Q9NQ03 307 aa8.46□□□□□ -1.05
HLA-DOB-208ENST00000475235 H0YIZ8 118 aa8.45□□□□□ -1.06
HLA-DOB-208ENST00000475235 BUB3O43684 328 aa8.45□□□□□ -1.06
HLA-DOB-208ENST00000475235 ZNF90Q03938 601 aa8.45□□□□□ -1.06
HLA-DOB-208ENST00000475235 IL15RAQ13261 267 aa8.45□□□□□ -1.06
HLA-DOB-208ENST00000475235 KIR3DS1Q14943 382 aa8.45□□□□□ -1.06
HLA-DOB-208ENST00000475235 DCANP1Q8TF63 244 aa8.45□□□□□ -1.06
HLA-DOB-208ENST00000475235 PKIGQ9Y2B9 76 aa8.45□□□□□ -1.06
HLA-DOB-208ENST00000475235 SMIM13P0DJ93 91 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms