RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 LINC01556Q5JQF7 62 aa8.26□□□□□ -1.09
SSR1-205ENST00000475213 OR10J3Q5JRS4 329 aa8.26□□□□□ -1.09
SSR1-205ENST00000475213 UFSP1Q6NVU6 142 aa8.26□□□□□ -1.09
SSR1-205ENST00000475213 ATP6V0E2Q8NHE4 81 aa8.26□□□□□ -1.09
SSR1-205ENST00000475213 SAMD10Q9BYL1 202 aa8.26□□□□□ -1.09
SSR1-205ENST00000475213 GTSF1LQ9H1H1 148 aa8.26□□□□□ -1.09
SSR1-205ENST00000475213 A0A087WTM6 91 aa8.25□□□□□ -1.09
SSR1-205ENST00000475213 FUSP35637 526 aaKnown RBP eCLIP8.25□□□□□ -1.09
SSR1-205ENST00000475213 LELP1Q5T871 98 aa8.25□□□□□ -1.09
SSR1-205ENST00000475213 LCE3BQ5TA77 95 aa8.25□□□□□ -1.09
SSR1-205ENST00000475213 TMUB2Q71RG4 321 aa8.25□□□□□ -1.09
SSR1-205ENST00000475213 SCRT2Q9NQ03 307 aa8.25□□□□□ -1.09
SSR1-205ENST00000475213 ABCA13Q86UQ4 5058 aa8.24□□□□□ -1.09
SSR1-205ENST00000475213 TMSB15BA0A087X1C1 80 aa8.24□□□□□ -1.09
SSR1-205ENST00000475213 GAGE12JA6NER3 117 aa8.24□□□□□ -1.09
SSR1-205ENST00000475213 LINC00694P0DN24 101 aa8.24□□□□□ -1.09
SSR1-205ENST00000475213 EIF5AP63241 154 aaKnown RBP8.24□□□□□ -1.09
SSR1-205ENST00000475213 GAGE1Q13065 139 aa8.24□□□□□ -1.09
SSR1-205ENST00000475213 GAGE4Q13068 117 aa8.24□□□□□ -1.09
SSR1-205ENST00000475213 GAGE5Q13069 117 aa8.24□□□□□ -1.09
SSR1-205ENST00000475213 GAGE13Q4V321 117 aa8.24□□□□□ -1.09
SSR1-205ENST00000475213 C14orf178Q8N769 122 aaPredicted RBP8.24□□□□□ -1.09
SSR1-205ENST00000475213 MAPKAPK5-AS1Q8N8E1 139 aa8.24□□□□□ -1.09
SSR1-205ENST00000475213 SYT8Q8NBV8 401 aa8.24□□□□□ -1.09
SSR1-205ENST00000475213 Q9UF83 564 aa8.24□□□□□ -1.09
SSR1-205ENST00000475213 PHLDA3Q9Y5J5 127 aa8.24□□□□□ -1.09
SSR1-205ENST00000475213 IBA57-AS1B1ANH7 110 aa8.23□□□□□ -1.09
SSR1-205ENST00000475213 PFDN1O60925 122 aa8.23□□□□□ -1.09
SSR1-205ENST00000475213 IGHV3-30P01768 117 aa8.23□□□□□ -1.09
SSR1-205ENST00000475213 IGHV3-33P01772 117 aa8.23□□□□□ -1.09
SSR1-205ENST00000475213 S100A9P06702 114 aaKnown RBP8.23□□□□□ -1.09
SSR1-205ENST00000475213 IGHV3-30-3P0DP02 117 aa8.23□□□□□ -1.09
SSR1-205ENST00000475213 IGHV3-30-5P0DP03 117 aa8.23□□□□□ -1.09
SSR1-205ENST00000475213 TPT1P13693 172 aaKnown RBP8.23□□□□□ -1.09
SSR1-205ENST00000475213 M0R381 172 aa8.22□□□□□ -1.09
SSR1-205ENST00000475213 RHODO00212 210 aa8.22□□□□□ -1.09
SSR1-205ENST00000475213 FAM74A4Q5TZK3 123 aa8.22□□□□□ -1.09
SSR1-205ENST00000475213 SFRP2Q96HF1 295 aa8.22□□□□□ -1.09
SSR1-205ENST00000475213 MLST8Q9BVC4 326 aa8.22□□□□□ -1.09
SSR1-205ENST00000475213 A0A087WWL8 130 aa8.21□□□□□ -1.1
SSR1-205ENST00000475213 CCL20P78556 96 aa8.21□□□□□ -1.1
SSR1-205ENST00000475213 BAGE2Q86Y30 109 aa8.21□□□□□ -1.1
SSR1-205ENST00000475213 ZFP82Q8N141 532 aa8.21□□□□□ -1.1
SSR1-205ENST00000475213 PSCAO43653 123 aa8.2□□□□□ -1.1
SSR1-205ENST00000475213 RPL19P84098 196 aaKnown RBP8.2□□□□□ -1.1
SSR1-205ENST00000475213 Q8N1X5 172 aa8.2□□□□□ -1.1
SSR1-205ENST00000475213 Q9HAA7 133 aa8.2□□□□□ -1.1
SSR1-205ENST00000475213 TRAV1-1A0A0B4J248 108 aa8.19□□□□□ -1.1
SSR1-205ENST00000475213 LRCOL1A6NCL2 159 aa8.19□□□□□ -1.1
SSR1-205ENST00000475213 CXCL1P09341 107 aa8.19□□□□□ -1.1
SSR1-205ENST00000475213 RPL35P42766 123 aaKnown RBP8.19□□□□□ -1.1
SSR1-205ENST00000475213 MANBALQ9NQG1 85 aa8.19□□□□□ -1.1
SSR1-205ENST00000475213 GNG13Q9P2W3 67 aa8.19□□□□□ -1.1
SSR1-205ENST00000475213 A0A087WWC5 75 aa8.18□□□□□ -1.1
SSR1-205ENST00000475213 RAB5CP51148 216 aa8.18□□□□□ -1.1
SSR1-205ENST00000475213 KRTAP10-1P60331 282 aa8.18□□□□□ -1.1
SSR1-205ENST00000475213 LAGE3Q14657 143 aa8.18□□□□□ -1.1
SSR1-205ENST00000475213 PRR27Q6MZM9 219 aa8.18□□□□□ -1.1
SSR1-205ENST00000475213 TCTE3Q8IZS6 198 aa8.18□□□□□ -1.1
SSR1-205ENST00000475213 OR10AG1Q8NH19 301 aa8.18□□□□□ -1.1
SSR1-205ENST00000475213 DERL1Q9BUN8 251 aa8.18□□□□□ -1.1
SSR1-205ENST00000475213 SNAI2O43623 268 aa8.17□□□□□ -1.1
SSR1-205ENST00000475213 SULT1A2P50226 295 aa8.17□□□□□ -1.1
SSR1-205ENST00000475213 EIF5AL1Q6IS14 154 aaKnown RBP8.17□□□□□ -1.1
SSR1-205ENST00000475213 C11orf52Q96A22 123 aa8.17□□□□□ -1.1
SSR1-205ENST00000475213 MUC21A0A0G2JKD1 596 aa8.16□□□□□ -1.1
SSR1-205ENST00000475213 TRBV10-1A0A0K0K1A3 114 aa8.16□□□□□ -1.1
SSR1-205ENST00000475213 MUC21A0A140T8X8 626 aa8.16□□□□□ -1.1
SSR1-205ENST00000475213 OR5AL1P0C617 328 aa8.16□□□□□ -1.1
SSR1-205ENST00000475213 GCSHP23434 173 aa8.16□□□□□ -1.1
SSR1-205ENST00000475213 XGP55808 180 aa8.16□□□□□ -1.1
SSR1-205ENST00000475213 DAZ4Q86SG3 579 aaKnown RBP8.16□□□□□ -1.1
SSR1-205ENST00000475213 DAZ3Q9NR90 486 aaKnown RBP8.16□□□□□ -1.1
SSR1-205ENST00000475213 TRBV7-3A0A075B6L6 115 aa8.15□□□□□ -1.1
SSR1-205ENST00000475213 TEX46H3BTG2 121 aa8.15□□□□□ -1.1
SSR1-205ENST00000475213 IGLV2-8P01709 118 aa8.15□□□□□ -1.1
SSR1-205ENST00000475213 C1QBP02746 253 aa8.15□□□□□ -1.1
SSR1-205ENST00000475213 RAB4BP61018 213 aa8.15□□□□□ -1.1
SSR1-205ENST00000475213 UBE2D3P61077 147 aa8.15□□□□□ -1.1
SSR1-205ENST00000475213 UBE2D2P62837 147 aa8.15□□□□□ -1.1
SSR1-205ENST00000475213 RPL36AP83881 106 aaKnown RBP8.15□□□□□ -1.1
SSR1-205ENST00000475213 CENPWQ5EE01 88 aa8.15□□□□□ -1.1
SSR1-205ENST00000475213 SPANXN1Q5VSR9 72 aa8.15□□□□□ -1.1
SSR1-205ENST00000475213 Q8N814 137 aa8.15□□□□□ -1.1
SSR1-205ENST00000475213 OR10G8Q8NGN5 311 aa8.15□□□□□ -1.1
SSR1-205ENST00000475213 RPL36ALQ969Q0 106 aaKnown RBP8.15□□□□□ -1.1
SSR1-205ENST00000475213 TM2D2Q9BX73 214 aa8.15□□□□□ -1.1
SSR1-205ENST00000475213 FAT1Q14517 4588 aa8.15□□□□□ -1.11
SSR1-205ENST00000475213 IGLV5-52A0A0A0MRZ9 124 aa8.14□□□□□ -1.11
SSR1-205ENST00000475213 TRAV8-3A0A0A6YYJ7 113 aa8.14□□□□□ -1.11
SSR1-205ENST00000475213 SSTP61278 116 aa8.14□□□□□ -1.11
SSR1-205ENST00000475213 ZNF56Q15929 161 aa8.14□□□□□ -1.11
SSR1-205ENST00000475213 TOR2AQ5JU69 321 aa8.14□□□□□ -1.11
SSR1-205ENST00000475213 Q6ZNX1 250 aa8.14□□□□□ -1.11
SSR1-205ENST00000475213 SLC51BQ86UW2 128 aa8.14□□□□□ -1.11
SSR1-205ENST00000475213 NIT1Q86X76 327 aa8.14□□□□□ -1.11
SSR1-205ENST00000475213 NEXN-AS1Q8NBZ9 246 aa8.14□□□□□ -1.11
SSR1-205ENST00000475213 NTN5Q8WTR8 489 aaPredicted RBP8.14□□□□□ -1.11
SSR1-205ENST00000475213 RAB19A4D1S5 217 aa8.13□□□□□ -1.11
SSR1-205ENST00000475213 MEF2BQ02080 365 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 447.4 ms