RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 ATP6V0E2Q8NHE4 81 aa6.39□□□□□ -1.39
PDPN-204ENST00000475043 MBD3L1Q8WWY6 194 aa6.39□□□□□ -1.39
PDPN-204ENST00000475043 JPT2Q9H910 190 aa6.39□□□□□ -1.39
PDPN-204ENST00000475043 PHLDA3Q9Y5J5 127 aa6.39□□□□□ -1.39
PDPN-204ENST00000475043 TRBV6-1A0A0K0K1D8 114 aa6.38□□□□□ -1.39
PDPN-204ENST00000475043 GAGE12JA6NER3 117 aa6.38□□□□□ -1.39
PDPN-204ENST00000475043 M0R381 172 aa6.38□□□□□ -1.39
PDPN-204ENST00000475043 CDK2AP2O75956 126 aa6.38□□□□□ -1.39
PDPN-204ENST00000475043 TIRAPP58753 221 aa6.38□□□□□ -1.39
PDPN-204ENST00000475043 GAGE1Q13065 139 aa6.38□□□□□ -1.39
PDPN-204ENST00000475043 GAGE4Q13068 117 aa6.38□□□□□ -1.39
PDPN-204ENST00000475043 GAGE5Q13069 117 aa6.38□□□□□ -1.39
PDPN-204ENST00000475043 ZNF674Q2M3X9 581 aa6.38□□□□□ -1.39
PDPN-204ENST00000475043 GAGE13Q4V321 117 aa6.38□□□□□ -1.39
PDPN-204ENST00000475043 PIK3CD-AS1Q5SR53 167 aa6.38□□□□□ -1.39
PDPN-204ENST00000475043 ZFP2Q6ZN57 461 aa6.38□□□□□ -1.39
PDPN-204ENST00000475043 COX8CQ7Z4L0 72 aa6.38□□□□□ -1.39
PDPN-204ENST00000475043 C10orf126Q8N4M7 172 aa6.38□□□□□ -1.39
PDPN-204ENST00000475043 SAMD10Q9BYL1 202 aa6.38□□□□□ -1.39
PDPN-204ENST00000475043 IGHV3-30P01768 117 aa6.37□□□□□ -1.39
PDPN-204ENST00000475043 IGHV3-33P01772 117 aa6.37□□□□□ -1.39
PDPN-204ENST00000475043 S100A9P06702 114 aaKnown RBP6.37□□□□□ -1.39
PDPN-204ENST00000475043 IGHV3-30-3P0DP02 117 aa6.37□□□□□ -1.39
PDPN-204ENST00000475043 IGHV3-30-5P0DP03 117 aa6.37□□□□□ -1.39
PDPN-204ENST00000475043 FUSP35637 526 aaKnown RBP eCLIP6.37□□□□□ -1.39
PDPN-204ENST00000475043 DNLZQ5SXM8 178 aa6.37□□□□□ -1.39
PDPN-204ENST00000475043 LELP1Q5T871 98 aa6.37□□□□□ -1.39
PDPN-204ENST00000475043 Q6ZSN1 163 aa6.37□□□□□ -1.39
PDPN-204ENST00000475043 KRTAP4-2Q9BYR5 136 aa6.37□□□□□ -1.39
PDPN-204ENST00000475043 GTSF1LQ9H1H1 148 aa6.37□□□□□ -1.39
PDPN-204ENST00000475043 HERC2O95714 4834 aa6.37□□□□□ -1.39
PDPN-204ENST00000475043 A0A087WWL8 130 aa6.36□□□□□ -1.39
PDPN-204ENST00000475043 RHODO00212 210 aa6.36□□□□□ -1.39
PDPN-204ENST00000475043 PSCAO43653 123 aa6.36□□□□□ -1.39
PDPN-204ENST00000475043 LINC01556Q5JQF7 62 aa6.36□□□□□ -1.39
PDPN-204ENST00000475043 EIF5AL1Q6IS14 154 aaKnown RBP6.36□□□□□ -1.39
PDPN-204ENST00000475043 PRR27Q6MZM9 219 aa6.36□□□□□ -1.39
PDPN-204ENST00000475043 BAGE2Q86Y30 109 aa6.36□□□□□ -1.39
PDPN-204ENST00000475043 C14orf178Q8N769 122 aaPredicted RBP6.36□□□□□ -1.39
PDPN-204ENST00000475043 MAPKAPK5-AS1Q8N8E1 139 aa6.36□□□□□ -1.39
PDPN-204ENST00000475043 Q9HAA7 133 aa6.36□□□□□ -1.39
PDPN-204ENST00000475043 GNG13Q9P2W3 67 aa6.36□□□□□ -1.39
PDPN-204ENST00000475043 A0A087WTM6 91 aa6.35□□□□□ -1.39
PDPN-204ENST00000475043 TEX46H3BTG2 121 aa6.35□□□□□ -1.39
PDPN-204ENST00000475043 CCL20P78556 96 aa6.35□□□□□ -1.39
PDPN-204ENST00000475043 RPL19P84098 196 aaKnown RBP6.35□□□□□ -1.39
PDPN-204ENST00000475043 UFSP1Q6NVU6 142 aa6.35□□□□□ -1.39
PDPN-204ENST00000475043 ZFP82Q8N141 532 aa6.35□□□□□ -1.39
PDPN-204ENST00000475043 SFRP2Q96HF1 295 aa6.35□□□□□ -1.39
PDPN-204ENST00000475043 MANBALQ9NQG1 85 aa6.35□□□□□ -1.39
PDPN-204ENST00000475043 Q9UF83 564 aa6.35□□□□□ -1.39
PDPN-204ENST00000475043 IBA57-AS1B1ANH7 110 aa6.34□□□□□ -1.39
PDPN-204ENST00000475043 RPL35P42766 123 aaKnown RBP6.34□□□□□ -1.39
PDPN-204ENST00000475043 RAB5CP51148 216 aa6.34□□□□□ -1.39
PDPN-204ENST00000475043 LINC00310P59036 64 aa6.34□□□□□ -1.39
PDPN-204ENST00000475043 SSTP61278 116 aa6.34□□□□□ -1.39
PDPN-204ENST00000475043 MLST8Q9BVC4 326 aa6.34□□□□□ -1.39
PDPN-204ENST00000475043 SCRT2Q9NQ03 307 aa6.34□□□□□ -1.39
PDPN-204ENST00000475043 DYNC1H1Q14204 4646 aaKnown RBP6.34□□□□□ -1.39
PDPN-204ENST00000475043 DNAH11Q96DT5 4516 aa6.34□□□□□ -1.39
PDPN-204ENST00000475043 MUC21A0A0G2JKD1 596 aa6.33□□□□□ -1.4
PDPN-204ENST00000475043 MUC21A0A140T8X8 626 aa6.33□□□□□ -1.4
PDPN-204ENST00000475043 TCTE3Q8IZS6 198 aa6.33□□□□□ -1.4
PDPN-204ENST00000475043 DERL1Q9BUN8 251 aa6.33□□□□□ -1.4
PDPN-204ENST00000475043 KRTAP4-5Q9BYR2 181 aa6.33□□□□□ -1.4
PDPN-204ENST00000475043 URGCP-MRPS24S4R325 110 aa6.33□□□□□ -1.4
PDPN-204ENST00000475043 A0A087WWC5 75 aa6.32□□□□□ -1.4
PDPN-204ENST00000475043 TRAV1-1A0A0B4J248 108 aa6.32□□□□□ -1.4
PDPN-204ENST00000475043 C1QBP02746 253 aa6.32□□□□□ -1.4
PDPN-204ENST00000475043 LINC00694P0DN24 101 aa6.32□□□□□ -1.4
PDPN-204ENST00000475043 SULT1A2P50226 295 aa6.32□□□□□ -1.4
PDPN-204ENST00000475043 RPL36AP83881 106 aaKnown RBP6.32□□□□□ -1.4
PDPN-204ENST00000475043 ZNF56Q15929 161 aa6.32□□□□□ -1.4
PDPN-204ENST00000475043 CENPWQ5EE01 88 aa6.32□□□□□ -1.4
PDPN-204ENST00000475043 SPANXN1Q5VSR9 72 aa6.32□□□□□ -1.4
PDPN-204ENST00000475043 OR10AG1Q8NH19 301 aa6.32□□□□□ -1.4
PDPN-204ENST00000475043 RPL36ALQ969Q0 106 aaKnown RBP6.32□□□□□ -1.4
PDPN-204ENST00000475043 TRBV10-1A0A0K0K1A3 114 aa6.31□□□□□ -1.4
PDPN-204ENST00000475043 PRSS47A8MTI9 375 aa6.31□□□□□ -1.4
PDPN-204ENST00000475043 IFNA1P01562 189 aa6.31□□□□□ -1.4
PDPN-204ENST00000475043 CXCL1P09341 107 aa6.31□□□□□ -1.4
PDPN-204ENST00000475043 MEF2BQ02080 365 aaPredicted RBP6.31□□□□□ -1.4
PDPN-204ENST00000475043 LAGE3Q14657 143 aa6.31□□□□□ -1.4
PDPN-204ENST00000475043 DAZ4Q86SG3 579 aaKnown RBP6.31□□□□□ -1.4
PDPN-204ENST00000475043 SLC51BQ86UW2 128 aa6.31□□□□□ -1.4
PDPN-204ENST00000475043 C11orf52Q96A22 123 aa6.31□□□□□ -1.4
PDPN-204ENST00000475043 DAZAP1Q96EP5 407 aaKnown RBP6.31□□□□□ -1.4
PDPN-204ENST00000475043 TPPP3Q9BW30 176 aa6.31□□□□□ -1.4
PDPN-204ENST00000475043 DAZ3Q9NR90 486 aaKnown RBP6.31□□□□□ -1.4
PDPN-204ENST00000475043 PCLOQ9Y6V0 5065 aa6.3□□□□□ -1.4
PDPN-204ENST00000475043 TRBV7-3A0A075B6L6 115 aa6.3□□□□□ -1.4
PDPN-204ENST00000475043 RAB19A4D1S5 217 aa6.3□□□□□ -1.4
PDPN-204ENST00000475043 LRCOL1A6NCL2 159 aa6.3□□□□□ -1.4
PDPN-204ENST00000475043 F5H697 171 aa6.3□□□□□ -1.4
PDPN-204ENST00000475043 SNAI2O43623 268 aa6.3□□□□□ -1.4
PDPN-204ENST00000475043 PDE6DO43924 150 aa6.3□□□□□ -1.4
PDPN-204ENST00000475043 OR5AL1P0C617 328 aa6.3□□□□□ -1.4
PDPN-204ENST00000475043 SMIM17P0DL12 118 aa6.3□□□□□ -1.4
PDPN-204ENST00000475043 GNG4P50150 75 aa6.3□□□□□ -1.4
PDPN-204ENST00000475043 RAB4BP61018 213 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms