RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 Q8N3U1 123 aa12.28□□□□□ -0.44
DNMT3A-210ENST00000474807 SFRP2Q96HF1 295 aa12.28□□□□□ -0.44
DNMT3A-210ENST00000474807 TMSB15BA0A087X1C1 80 aa12.27□□□□□ -0.45
DNMT3A-210ENST00000474807 AKR1C3P42330 323 aa12.27□□□□□ -0.45
DNMT3A-210ENST00000474807 FAM213BQ8TBF2 198 aa12.27□□□□□ -0.45
DNMT3A-210ENST00000474807 SFT2D1Q8WV19 159 aa12.27□□□□□ -0.45
DNMT3A-210ENST00000474807 PHLDA3Q9Y5J5 127 aa12.27□□□□□ -0.45
DNMT3A-210ENST00000474807 A0A0D9SG52 128 aa12.26□□□□□ -0.45
DNMT3A-210ENST00000474807 TPT1P13693 172 aaKnown RBP12.26□□□□□ -0.45
DNMT3A-210ENST00000474807 Q8N814 137 aa12.26□□□□□ -0.45
DNMT3A-210ENST00000474807 ZNF471Q9BX82 626 aaPredicted RBP12.26□□□□□ -0.45
DNMT3A-210ENST00000474807 HERC1Q15751 4861 aa12.25□□□□□ -0.45
DNMT3A-210ENST00000474807 A0A087WWL8 130 aa12.25□□□□□ -0.45
DNMT3A-210ENST00000474807 EPM2AB3EWF7 344 aa12.25□□□□□ -0.45
DNMT3A-210ENST00000474807 M0R381 172 aa12.25□□□□□ -0.45
DNMT3A-210ENST00000474807 BCL2L11O43521 198 aa12.25□□□□□ -0.45
DNMT3A-210ENST00000474807 FAM74A4Q5TZK3 123 aa12.25□□□□□ -0.45
DNMT3A-210ENST00000474807 NTN5Q8WTR8 489 aaPredicted RBP12.25□□□□□ -0.45
DNMT3A-210ENST00000474807 A0A087WWC5 75 aa12.24□□□□□ -0.45
DNMT3A-210ENST00000474807 IGLV5-52A0A0A0MRZ9 124 aa12.24□□□□□ -0.45
DNMT3A-210ENST00000474807 A0A1B0GV50 99 aa12.24□□□□□ -0.45
DNMT3A-210ENST00000474807 KANTRA0A1W2PQU2 76 aa12.24□□□□□ -0.45
DNMT3A-210ENST00000474807 S100A9P06702 114 aaKnown RBP12.24□□□□□ -0.45
DNMT3A-210ENST00000474807 ZFP82Q8N141 532 aa12.24□□□□□ -0.45
DNMT3A-210ENST00000474807 MLST8Q9BVC4 326 aa12.24□□□□□ -0.45
DNMT3A-210ENST00000474807 SCO2A0A1W2PP80 73 aa12.23□□□□□ -0.45
DNMT3A-210ENST00000474807 DAZ4Q86SG3 579 aaKnown RBP12.23□□□□□ -0.45
DNMT3A-210ENST00000474807 DAZ3Q9NR90 486 aaKnown RBP12.23□□□□□ -0.45
DNMT3A-210ENST00000474807 H2AFB1P0C5Y9 115 aa12.22□□□□□ -0.45
DNMT3A-210ENST00000474807 TM2D2Q9BX73 214 aa12.22□□□□□ -0.45
DNMT3A-210ENST00000474807 TRAV8-3A0A0A6YYJ7 113 aa12.21□□□□□ -0.45
DNMT3A-210ENST00000474807 TRBV10-1A0A0K0K1A3 114 aa12.21□□□□□ -0.45
DNMT3A-210ENST00000474807 PFDN1O60925 122 aa12.21□□□□□ -0.45
DNMT3A-210ENST00000474807 RPL19P84098 196 aaKnown RBP12.21□□□□□ -0.45
DNMT3A-210ENST00000474807 BAGE2Q86Y30 109 aa12.21□□□□□ -0.45
DNMT3A-210ENST00000474807 CXCL1P09341 107 aa12.2□□□□□ -0.46
DNMT3A-210ENST00000474807 EIF5AP63241 154 aaKnown RBP12.2□□□□□ -0.46
DNMT3A-210ENST00000474807 WFDC2Q14508 124 aa12.2□□□□□ -0.46
DNMT3A-210ENST00000474807 TOR2AQ5JU69 321 aa12.19□□□□□ -0.46
DNMT3A-210ENST00000474807 TMUB2Q71RG4 321 aa12.19□□□□□ -0.46
DNMT3A-210ENST00000474807 NIT1Q86X76 327 aa12.19□□□□□ -0.46
DNMT3A-210ENST00000474807 SSBP4Q9BWG4 385 aaPredicted RBP12.19□□□□□ -0.46
DNMT3A-210ENST00000474807 MYCBP2O75592 4640 aa12.18□□□□□ -0.46
DNMT3A-210ENST00000474807 SNAI2O43623 268 aa12.18□□□□□ -0.46
DNMT3A-210ENST00000474807 UBE2D3P61077 147 aa12.18□□□□□ -0.46
DNMT3A-210ENST00000474807 UBE2D2P62837 147 aa12.18□□□□□ -0.46
DNMT3A-210ENST00000474807 RPL36AP83881 106 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-210ENST00000474807 Q5VSD8 79 aa12.18□□□□□ -0.46
DNMT3A-210ENST00000474807 OR10AG1Q8NH19 301 aa12.18□□□□□ -0.46
DNMT3A-210ENST00000474807 RPL36ALQ969Q0 106 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-210ENST00000474807 TMEM70Q9BUB7 260 aa12.18□□□□□ -0.46
DNMT3A-210ENST00000474807 TRBV7-3A0A075B6L6 115 aa12.17□□□□□ -0.46
DNMT3A-210ENST00000474807 CCL20P78556 96 aa12.17□□□□□ -0.46
DNMT3A-210ENST00000474807 OR10G8Q8NGN5 311 aa12.17□□□□□ -0.46
DNMT3A-210ENST00000474807 FRZBQ92765 325 aa12.17□□□□□ -0.46
DNMT3A-210ENST00000474807 SMR3BP02814 79 aaPredicted RBP12.16□□□□□ -0.46
DNMT3A-210ENST00000474807 OR5AL1P0C617 328 aa12.16□□□□□ -0.46
DNMT3A-210ENST00000474807 RPL35P42766 123 aaKnown RBP12.16□□□□□ -0.46
DNMT3A-210ENST00000474807 RAB4BP61018 213 aa12.16□□□□□ -0.46
DNMT3A-210ENST00000474807 HAMPP81172 84 aa12.16□□□□□ -0.46
DNMT3A-210ENST00000474807 PRR27Q6MZM9 219 aa12.16□□□□□ -0.46
DNMT3A-210ENST00000474807 URGCP-MRPS24S4R325 110 aa12.16□□□□□ -0.46
DNMT3A-210ENST00000474807 C11orf52Q96A22 123 aa12.15□□□□□ -0.46
DNMT3A-210ENST00000474807 DNAJC30Q96LL9 226 aa12.15□□□□□ -0.46
DNMT3A-210ENST00000474807 CHCHD7Q9BUK0 85 aa12.15□□□□□ -0.46
DNMT3A-210ENST00000474807 DERL1Q9BUN8 251 aa12.15□□□□□ -0.46
DNMT3A-210ENST00000474807 MANBALQ9NQG1 85 aa12.15□□□□□ -0.46
DNMT3A-210ENST00000474807 FAM30AQ9NZY2 134 aa12.15□□□□□ -0.46
DNMT3A-210ENST00000474807 COX11Q9Y6N1 276 aa12.15□□□□□ -0.46
DNMT3A-210ENST00000474807 TRAV1-1A0A0B4J248 108 aa12.14□□□□□ -0.47
DNMT3A-210ENST00000474807 LECT2O14960 151 aa12.14□□□□□ -0.47
DNMT3A-210ENST00000474807 INAFM2P0DMQ5 153 aa12.14□□□□□ -0.47
DNMT3A-210ENST00000474807 NEXN-AS1Q8NBZ9 246 aa12.14□□□□□ -0.47
DNMT3A-210ENST00000474807 GNG13Q9P2W3 67 aa12.14□□□□□ -0.47
DNMT3A-210ENST00000474807 KLK12Q9UKR0 248 aa12.14□□□□□ -0.47
DNMT3A-210ENST00000474807 MUC21A0A0G2JKD1 596 aa12.13□□□□□ -0.47
DNMT3A-210ENST00000474807 MUC21A0A140T8X8 626 aa12.13□□□□□ -0.47
DNMT3A-210ENST00000474807 C1QBP02746 253 aa12.13□□□□□ -0.47
DNMT3A-210ENST00000474807 RAB5CP51148 216 aa12.13□□□□□ -0.47
DNMT3A-210ENST00000474807 ZNF56Q15929 161 aa12.13□□□□□ -0.47
DNMT3A-210ENST00000474807 SPANXN1Q5VSR9 72 aa12.13□□□□□ -0.47
DNMT3A-210ENST00000474807 A0A087WX48 190 aa12.12□□□□□ -0.47
DNMT3A-210ENST00000474807 TRBV6-8A0A0A6YYG3 113 aa12.12□□□□□ -0.47
DNMT3A-210ENST00000474807 BAALCQ8WXS3 180 aa12.12□□□□□ -0.47
DNMT3A-210ENST00000474807 RMI2Q96E14 147 aa12.12□□□□□ -0.47
DNMT3A-210ENST00000474807 KIF25-AS1Q9Y6Z4 181 aa12.12□□□□□ -0.47
DNMT3A-210ENST00000474807 IGLV2-8P01709 118 aa12.11□□□□□ -0.47
DNMT3A-210ENST00000474807 ELOBQ15370 118 aa12.11□□□□□ -0.47
DNMT3A-210ENST00000474807 UBE2WQ96B02 151 aa12.11□□□□□ -0.47
DNMT3A-210ENST00000474807 SRRM2Q9UQ35 2752 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-210ENST00000474807 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-210ENST00000474807 IGKV2D-24A0A075B6R9 120 aa12.1□□□□□ -0.47
DNMT3A-210ENST00000474807 SULT1A2P50226 295 aa12.1□□□□□ -0.47
DNMT3A-210ENST00000474807 CENPWQ5EE01 88 aa12.1□□□□□ -0.47
DNMT3A-210ENST00000474807 EIF5AL1Q6IS14 154 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-210ENST00000474807 KCNIP4Q6PIL6 250 aa12.1□□□□□ -0.47
DNMT3A-210ENST00000474807 ATRAIDQ6UW56 229 aa12.1□□□□□ -0.47
DNMT3A-210ENST00000474807 FAM229AH3BQW9 127 aa12.09□□□□□ -0.47
DNMT3A-210ENST00000474807 SSTP61278 116 aa12.09□□□□□ -0.47
DNMT3A-210ENST00000474807 Q6ZSA8 131 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms