RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 WFDC2Q14508 124 aa9.3□□□□□ -0.92
CCDC78-209ENST00000474647 TMEM75Q8N9X5 138 aa9.3□□□□□ -0.92
CCDC78-209ENST00000474647 C11orf52Q96A22 123 aa9.3□□□□□ -0.92
CCDC78-209ENST00000474647 KRTAP29-1A8MX34 341 aaPredicted RBP9.29□□□□□ -0.92
CCDC78-209ENST00000474647 RHOHQ15669 191 aa9.29□□□□□ -0.92
CCDC78-209ENST00000474647 LELP1Q5T871 98 aa9.29□□□□□ -0.92
CCDC78-209ENST00000474647 DEFB104AQ8WTQ1 72 aa9.29□□□□□ -0.92
CCDC78-209ENST00000474647 KCNS1Q96KK3 526 aa9.29□□□□□ -0.92
CCDC78-209ENST00000474647 TM2D2Q9BX73 214 aa9.29□□□□□ -0.92
CCDC78-209ENST00000474647 EIF5A2Q9GZV4 153 aaKnown RBP9.29□□□□□ -0.92
CCDC78-209ENST00000474647 TRAV8-1A0A0A6YYK1 113 aa9.28□□□□□ -0.92
CCDC78-209ENST00000474647 IGLV2-11P01706 119 aa9.28□□□□□ -0.92
CCDC78-209ENST00000474647 AKR1C3P42330 323 aa9.28□□□□□ -0.92
CCDC78-209ENST00000474647 LAGE3Q14657 143 aa9.28□□□□□ -0.92
CCDC78-209ENST00000474647 ZNF876PQ49A33 203 aa9.28□□□□□ -0.92
CCDC78-209ENST00000474647 Q8N3U1 123 aa9.28□□□□□ -0.92
CCDC78-209ENST00000474647 FMC1Q96HJ9 113 aa9.28□□□□□ -0.92
CCDC78-209ENST00000474647 TREM1Q9NP99 234 aa9.28□□□□□ -0.92
CCDC78-209ENST00000474647 LRP1Q07954 4544 aaKnown RBP9.27□□□□□ -0.93
CCDC78-209ENST00000474647 TRBV6-1A0A0K0K1D8 114 aa9.27□□□□□ -0.93
CCDC78-209ENST00000474647 TMEM250H0YL14 139 aa9.27□□□□□ -0.93
CCDC78-209ENST00000474647 UBE2G1P62253 170 aa9.27□□□□□ -0.93
CCDC78-209ENST00000474647 FLI1Q01543 452 aaPredicted RBP9.27□□□□□ -0.93
CCDC78-209ENST00000474647 LINC01620Q4KN68 170 aa9.27□□□□□ -0.93
CCDC78-209ENST00000474647 CFAP126Q5VTH2 177 aa9.27□□□□□ -0.93
CCDC78-209ENST00000474647 Q6ZSA8 131 aa9.27□□□□□ -0.93
CCDC78-209ENST00000474647 Q86TA4 180 aa9.27□□□□□ -0.93
CCDC78-209ENST00000474647 ATP6V0E2Q8NHE4 81 aa9.27□□□□□ -0.93
CCDC78-209ENST00000474647 LINC00479Q96M42 142 aa9.27□□□□□ -0.93
CCDC78-209ENST00000474647 GTSF1LQ9H1H1 148 aa9.27□□□□□ -0.93
CCDC78-209ENST00000474647 SMDT1Q9H4I9 107 aa9.27□□□□□ -0.93
CCDC78-209ENST00000474647 TRAV34A0A0B4J273 112 aa9.26□□□□□ -0.93
CCDC78-209ENST00000474647 TRBV6-4A0A1B0GX49 114 aa9.26□□□□□ -0.93
CCDC78-209ENST00000474647 RAB19A4D1S5 217 aa9.26□□□□□ -0.93
CCDC78-209ENST00000474647 RS1O15537 224 aa9.26□□□□□ -0.93
CCDC78-209ENST00000474647 S100A9P06702 114 aaKnown RBP9.26□□□□□ -0.93
CCDC78-209ENST00000474647 SYT8Q8NBV8 401 aa9.26□□□□□ -0.93
CCDC78-209ENST00000474647 TVP23CQ96ET8 276 aa9.26□□□□□ -0.93
CCDC78-209ENST00000474647 SGK494Q96LW2 274 aa9.26□□□□□ -0.93
CCDC78-209ENST00000474647 PSG8Q9UQ74 426 aa9.26□□□□□ -0.93
CCDC78-209ENST00000474647 SRP19P09132 144 aaKnown RBP9.25□□□□□ -0.93
CCDC78-209ENST00000474647 RPL35P42766 123 aaKnown RBP9.25□□□□□ -0.93
CCDC78-209ENST00000474647 SRSF3P84103 164 aaKnown RBP9.25□□□□□ -0.93
CCDC78-209ENST00000474647 PEA15Q15121 130 aa9.25□□□□□ -0.93
CCDC78-209ENST00000474647 SCXQ7RTU7 201 aa9.25□□□□□ -0.93
CCDC78-209ENST00000474647 NDFIP1Q9BT67 221 aa9.25□□□□□ -0.93
CCDC78-209ENST00000474647 DERL1Q9BUN8 251 aa9.25□□□□□ -0.93
CCDC78-209ENST00000474647 TRAV8-3A0A0A6YYJ7 113 aa9.24□□□□□ -0.93
CCDC78-209ENST00000474647 CIDEAO60543 219 aa9.24□□□□□ -0.93
CCDC78-209ENST00000474647 LTAP01374 205 aa9.24□□□□□ -0.93
CCDC78-209ENST00000474647 SERTAD4-AS1Q5TG53 156 aa9.24□□□□□ -0.93
CCDC78-209ENST00000474647 DAZ4Q86SG3 579 aaKnown RBP9.24□□□□□ -0.93
CCDC78-209ENST00000474647 PRNTQ86SH4 94 aa9.24□□□□□ -0.93
CCDC78-209ENST00000474647 BAALCQ8WXS3 180 aa9.24□□□□□ -0.93
CCDC78-209ENST00000474647 DAZ3Q9NR90 486 aaKnown RBP9.24□□□□□ -0.93
CCDC78-209ENST00000474647 HMCN2Q8NDA2 5059 aa9.23□□□□□ -0.93
CCDC78-209ENST00000474647 UBR4Q5T4S7 5183 aa9.23□□□□□ -0.93
CCDC78-209ENST00000474647 FAT3Q8TDW7 4589 aa9.23□□□□□ -0.93
CCDC78-209ENST00000474647 GAGE12JA6NER3 117 aa9.23□□□□□ -0.93
CCDC78-209ENST00000474647 KRBOX1C9JBD0 128 aa9.23□□□□□ -0.93
CCDC78-209ENST00000474647 C9JQL5 133 aa9.23□□□□□ -0.93
CCDC78-209ENST00000474647 MGST1P10620 155 aaKnown RBP9.23□□□□□ -0.93
CCDC78-209ENST00000474647 GAGE1Q13065 139 aa9.23□□□□□ -0.93
CCDC78-209ENST00000474647 GAGE4Q13068 117 aa9.23□□□□□ -0.93
CCDC78-209ENST00000474647 GAGE5Q13069 117 aa9.23□□□□□ -0.93
CCDC78-209ENST00000474647 GAGE13Q4V321 117 aa9.23□□□□□ -0.93
CCDC78-209ENST00000474647 SAPCD1Q5SSQ6 148 aa9.23□□□□□ -0.93
CCDC78-209ENST00000474647 PARLQ9H300 379 aa9.23□□□□□ -0.93
CCDC78-209ENST00000474647 ZFP30Q9Y2G7 519 aa9.23□□□□□ -0.93
CCDC78-209ENST00000474647 PKHD1L1Q86WI1 4243 aa9.23□□□□□ -0.93
CCDC78-209ENST00000474647 PGPEP1LA6NFU8 196 aa9.22□□□□□ -0.93
CCDC78-209ENST00000474647 SCO1O75880 301 aa9.22□□□□□ -0.93
CCDC78-209ENST00000474647 GCGP01275 180 aa9.22□□□□□ -0.93
CCDC78-209ENST00000474647 ZNF80P51504 273 aaPredicted RBP9.22□□□□□ -0.93
CCDC78-209ENST00000474647 CENPWQ5EE01 88 aa9.22□□□□□ -0.93
CCDC78-209ENST00000474647 UQCC3Q6UW78 93 aa9.22□□□□□ -0.93
CCDC78-209ENST00000474647 COX8CQ7Z4L0 72 aa9.22□□□□□ -0.93
CCDC78-209ENST00000474647 C9orf85Q96MD7 179 aa9.22□□□□□ -0.93
CCDC78-209ENST00000474647 C11orf21Q9P2W6 132 aa9.22□□□□□ -0.93
CCDC78-209ENST00000474647 TRBV20OR9-2A0A075B6H5 130 aa9.21□□□□□ -0.94
CCDC78-209ENST00000474647 CEBPGP53567 150 aa9.21□□□□□ -0.94
CCDC78-209ENST00000474647 SMIM12Q96EX1 92 aa9.21□□□□□ -0.94
CCDC78-209ENST00000474647 MLST8Q9BVC4 326 aa9.21□□□□□ -0.94
CCDC78-209ENST00000474647 IGLV2-8P01709 118 aa9.2□□□□□ -0.94
CCDC78-209ENST00000474647 GNG4P50150 75 aa9.2□□□□□ -0.94
CCDC78-209ENST00000474647 ZNF674Q2M3X9 581 aa9.2□□□□□ -0.94
CCDC78-209ENST00000474647 SMUG1Q53HV7 270 aa9.2□□□□□ -0.94
CCDC78-209ENST00000474647 BAGE2Q86Y30 109 aa9.2□□□□□ -0.94
CCDC78-209ENST00000474647 URGCP-MRPS24S4R325 110 aa9.2□□□□□ -0.94
CCDC78-209ENST00000474647 IGKV2D-24A0A075B6R9 120 aa9.19□□□□□ -0.94
CCDC78-209ENST00000474647 RNASE3P12724 160 aaKnown RBP9.19□□□□□ -0.94
CCDC78-209ENST00000474647 FAM74A3Q4VXF1 159 aa9.19□□□□□ -0.94
CCDC78-209ENST00000474647 RMI2Q96E14 147 aa9.19□□□□□ -0.94
CCDC78-209ENST00000474647 ZC2HC1AQ96GY0 325 aa9.19□□□□□ -0.94
CCDC78-209ENST00000474647 SMIM7Q9BQ49 75 aa9.19□□□□□ -0.94
CCDC78-209ENST00000474647 COX11Q9Y6N1 276 aa9.19□□□□□ -0.94
CCDC78-209ENST00000474647 ZNF727A8MUV8 499 aa9.18□□□□□ -0.94
CCDC78-209ENST00000474647 LINC00694P0DN24 101 aa9.18□□□□□ -0.94
CCDC78-209ENST00000474647 Q8N976 141 aa9.18□□□□□ -0.94
CCDC78-209ENST00000474647 DNAJC30Q96LL9 226 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms