RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 DMRTA1Q5VZB9 504 aa7.45□□□□□ -1.22
COL12A1-206ENST00000474564 TMEM191AQ9H0A3 160 aa7.45□□□□□ -1.22
COL12A1-206ENST00000474564 C11orf68Q9H3H3 251 aaKnown RBP7.45□□□□□ -1.22
COL12A1-206ENST00000474564 DPH3P1Q9H4G8 78 aa7.45□□□□□ -1.22
COL12A1-206ENST00000474564 GAGE12BA1L429 117 aa7.44□□□□□ -1.22
COL12A1-206ENST00000474564 H7C1H1 209 aa7.44□□□□□ -1.22
COL12A1-206ENST00000474564 GAGE7O76087 117 aa7.44□□□□□ -1.22
COL12A1-206ENST00000474564 PPP1R17O96001 155 aa7.44□□□□□ -1.22
COL12A1-206ENST00000474564 GAGE12FP0CL80 117 aa7.44□□□□□ -1.22
COL12A1-206ENST00000474564 GAGE12GP0CL81 117 aa7.44□□□□□ -1.22
COL12A1-206ENST00000474564 GAGE12IP0CL82 117 aa7.44□□□□□ -1.22
COL12A1-206ENST00000474564 DEFB130BP0DP73 79 aa7.44□□□□□ -1.22
COL12A1-206ENST00000474564 DEFB130AP0DP74 79 aa7.44□□□□□ -1.22
COL12A1-206ENST00000474564 CKS2P33552 79 aa7.44□□□□□ -1.22
COL12A1-206ENST00000474564 PDZD11Q5EBL8 140 aa7.44□□□□□ -1.22
COL12A1-206ENST00000474564 FAM222AQ5U5X8 452 aa7.44□□□□□ -1.22
COL12A1-206ENST00000474564 AMN1Q8IY45 258 aa7.44□□□□□ -1.22
COL12A1-206ENST00000474564 Q8NAQ8 132 aa7.44□□□□□ -1.22
COL12A1-206ENST00000474564 MRPL16Q9NX20 251 aaKnown RBP7.44□□□□□ -1.22
COL12A1-206ENST00000474564 TRAV4A0A0B4J268 109 aa7.43□□□□□ -1.22
COL12A1-206ENST00000474564 NXPH4O95158 308 aa7.43□□□□□ -1.22
COL12A1-206ENST00000474564 OR10J3Q5JRS4 329 aa7.43□□□□□ -1.22
COL12A1-206ENST00000474564 FAM74A4Q5TZK3 123 aa7.43□□□□□ -1.22
COL12A1-206ENST00000474564 FAM104BQ5XKR9 115 aa7.43□□□□□ -1.22
COL12A1-206ENST00000474564 RNASEKQ6P5S7 137 aaKnown RBP7.43□□□□□ -1.22
COL12A1-206ENST00000474564 ORMDL3Q8N138 153 aa7.43□□□□□ -1.22
COL12A1-206ENST00000474564 C14orf178Q8N769 122 aaPredicted RBP7.43□□□□□ -1.22
COL12A1-206ENST00000474564 SAMD10Q9BYL1 202 aa7.43□□□□□ -1.22
COL12A1-206ENST00000474564 RETNQ9HD89 108 aa7.43□□□□□ -1.22
COL12A1-206ENST00000474564 DKK2Q9UBU2 259 aa7.43□□□□□ -1.22
COL12A1-206ENST00000474564 TRGV4A0A0C4DH28 118 aa7.42□□□□□ -1.22
COL12A1-206ENST00000474564 D6R8Y8 96 aa7.42□□□□□ -1.22
COL12A1-206ENST00000474564 DEFB4AO15263 64 aa7.42□□□□□ -1.22
COL12A1-206ENST00000474564 PPBPP02775 128 aa7.42□□□□□ -1.22
COL12A1-206ENST00000474564 EVI2AP22794 236 aa7.42□□□□□ -1.22
COL12A1-206ENST00000474564 ZNF56Q15929 161 aa7.42□□□□□ -1.22
COL12A1-206ENST00000474564 ZFP2Q6ZN57 461 aa7.42□□□□□ -1.22
COL12A1-206ENST00000474564 Q6ZTI0 123 aa7.42□□□□□ -1.22
COL12A1-206ENST00000474564 GATD1Q8NB37 220 aa7.42□□□□□ -1.22
COL12A1-206ENST00000474564 IL17DQ8TAD2 202 aa7.42□□□□□ -1.22
COL12A1-206ENST00000474564 C11orf45Q8TAV5 145 aa7.42□□□□□ -1.22
COL12A1-206ENST00000474564 PRELID3AQ96N28 172 aa7.42□□□□□ -1.22
COL12A1-206ENST00000474564 MSRB1Q9NZV6 116 aa7.42□□□□□ -1.22
COL12A1-206ENST00000474564 A0A0J9YWU9 116 aa7.41□□□□□ -1.22
COL12A1-206ENST00000474564 C5orf52A6NGY3 159 aa7.41□□□□□ -1.22
COL12A1-206ENST00000474564 RS1O15537 224 aa7.41□□□□□ -1.22
COL12A1-206ENST00000474564 HSBP1O75506 76 aa7.41□□□□□ -1.22
COL12A1-206ENST00000474564 ATP5G1P05496 136 aa7.41□□□□□ -1.22
COL12A1-206ENST00000474564 IQCJQ1A5X6 159 aa7.41□□□□□ -1.22
COL12A1-206ENST00000474564 MRPL51Q4U2R6 128 aaKnown RBP7.41□□□□□ -1.22
COL12A1-206ENST00000474564 FA2HQ7L5A8 372 aa7.41□□□□□ -1.22
COL12A1-206ENST00000474564 ZNF575Q86XF7 245 aa7.41□□□□□ -1.22
COL12A1-206ENST00000474564 PRSS3P2Q8NHM4 247 aa7.41□□□□□ -1.22
COL12A1-206ENST00000474564 TMEM18Q96B42 140 aa7.41□□□□□ -1.22
COL12A1-206ENST00000474564 MRAP2Q96G30 205 aa7.41□□□□□ -1.22
COL12A1-206ENST00000474564 C18orf15Q96N68 181 aa7.41□□□□□ -1.22
COL12A1-206ENST00000474564 ALKBH7Q9BT30 221 aaPredicted RBP7.41□□□□□ -1.22
COL12A1-206ENST00000474564 MAP1LC3AQ9H492 121 aa7.41□□□□□ -1.22
COL12A1-206ENST00000474564 VWFP04275 2813 aa7.41□□□□□ -1.22
COL12A1-206ENST00000474564 A0A087WWL8 130 aa7.4□□□□□ -1.22
COL12A1-206ENST00000474564 LOC105371267A0A1B0GV96 52 aa7.4□□□□□ -1.22
COL12A1-206ENST00000474564 PLAC8L1A1L4L8 177 aa7.4□□□□□ -1.22
COL12A1-206ENST00000474564 PHOX2AO14813 284 aa7.4□□□□□ -1.22
COL12A1-206ENST00000474564 NCR2O95944 276 aa7.4□□□□□ -1.22
COL12A1-206ENST00000474564 FABP4P15090 132 aa7.4□□□□□ -1.22
COL12A1-206ENST00000474564 PMCHP20382 165 aa7.4□□□□□ -1.22
COL12A1-206ENST00000474564 HOXA5P20719 270 aa7.4□□□□□ -1.22
COL12A1-206ENST00000474564 Q0VG73 95 aa7.4□□□□□ -1.22
COL12A1-206ENST00000474564 CFAP126Q5VTH2 177 aa7.4□□□□□ -1.22
COL12A1-206ENST00000474564 C18orf32Q8TCD1 76 aa7.4□□□□□ -1.22
COL12A1-206ENST00000474564 U3KQK5 164 aa7.4□□□□□ -1.22
COL12A1-206ENST00000474564 LOC389332A0A1B0GUA5 103 aa7.39□□□□□ -1.23
COL12A1-206ENST00000474564 SMKR1H3BMG3 65 aa7.39□□□□□ -1.23
COL12A1-206ENST00000474564 SERF1AO75920 110 aa7.39□□□□□ -1.23
COL12A1-206ENST00000474564 RAB4AP20338 218 aa7.39□□□□□ -1.23
COL12A1-206ENST00000474564 PRADC1Q9BSG0 188 aa7.39□□□□□ -1.23
COL12A1-206ENST00000474564 LAMTOR2Q9Y2Q5 125 aa7.39□□□□□ -1.23
COL12A1-206ENST00000474564 MUC4Q99102 2169 aa7.39□□□□□ -1.23
COL12A1-206ENST00000474564 F5H768 121 aa7.38□□□□□ -1.23
COL12A1-206ENST00000474564 IGHV3-53P01767 116 aa7.38□□□□□ -1.23
COL12A1-206ENST00000474564 CRYGDP07320 174 aa7.38□□□□□ -1.23
COL12A1-206ENST00000474564 HTN3P15516 51 aa7.38□□□□□ -1.23
COL12A1-206ENST00000474564 AMTP48728 403 aa7.38□□□□□ -1.23
COL12A1-206ENST00000474564 HIST3H2BBQ8N257 126 aa7.38□□□□□ -1.23
COL12A1-206ENST00000474564 LINC00612Q8N6U2 182 aa7.38□□□□□ -1.23
COL12A1-206ENST00000474564 HHLA3Q9XRX5 114 aa7.38□□□□□ -1.23
COL12A1-206ENST00000474564 TNFRSF18Q9Y5U5 241 aa7.38□□□□□ -1.23
COL12A1-206ENST00000474564 IGHV3-73A0A0B4J1V6 119 aa7.37□□□□□ -1.23
COL12A1-206ENST00000474564 RHOHQ15669 191 aa7.37□□□□□ -1.23
COL12A1-206ENST00000474564 ZNF479Q96JC4 524 aa7.37□□□□□ -1.23
COL12A1-206ENST00000474564 DNAJC30Q96LL9 226 aa7.37□□□□□ -1.23
COL12A1-206ENST00000474564 JPT2Q9H910 190 aa7.37□□□□□ -1.23
COL12A1-206ENST00000474564 PRO0255Q9UI72 69 aa7.37□□□□□ -1.23
COL12A1-206ENST00000474564 TRAV10A0A0B4J240 114 aa7.36□□□□□ -1.23
COL12A1-206ENST00000474564 TRAV26-2A0A0B4J265 109 aa7.36□□□□□ -1.23
COL12A1-206ENST00000474564 TRBV10-1A0A0K0K1A3 114 aa7.36□□□□□ -1.23
COL12A1-206ENST00000474564 TRBV6-4A0A1B0GX49 114 aa7.36□□□□□ -1.23
COL12A1-206ENST00000474564 TNFRSF6BO95407 300 aa7.36□□□□□ -1.23
COL12A1-206ENST00000474564 NPYP01303 97 aa7.36□□□□□ -1.23
COL12A1-206ENST00000474564 RPL36AP83881 106 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms