RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 COX7A1P24310 79 aa6.16□□□□□ -1.42
CCDC93-208ENST00000474546 ZNF80P51504 273 aaPredicted RBP6.16□□□□□ -1.42
CCDC93-208ENST00000474546 RHOHQ15669 191 aa6.16□□□□□ -1.42
CCDC93-208ENST00000474546 ATXN8Q156A1 80 aa6.16□□□□□ -1.42
CCDC93-208ENST00000474546 RUSC1-AS1Q66K80 236 aa6.16□□□□□ -1.42
CCDC93-208ENST00000474546 MORN3Q6PF18 240 aaPredicted RBP6.16□□□□□ -1.42
CCDC93-208ENST00000474546 NDUFA11Q86Y39 141 aa6.16□□□□□ -1.42
CCDC93-208ENST00000474546 ARL17AQ8IVW1 177 aa6.16□□□□□ -1.42
CCDC93-208ENST00000474546 SLC25A29Q8N8R3 303 aa6.16□□□□□ -1.42
CCDC93-208ENST00000474546 PLEKHB2Q96CS7 222 aa6.16□□□□□ -1.42
CCDC93-208ENST00000474546 PHLDA3Q9Y5J5 127 aa6.16□□□□□ -1.42
CCDC93-208ENST00000474546 IGKV3D-20A0A0C4DH25 116 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 IGHV7-4-1A0A0J9YVY3 117 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 FAM240AA0A1B0GVK7 77 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 F8W735 103 aaPredicted RBP6.15□□□□□ -1.42
CCDC93-208ENST00000474546 H3BUA1 57 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 CRLF1O75462 422 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 NXPH4O95158 308 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 IGHV1-69P01742 117 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 IGHG4P01861 327 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 CD7P09564 240 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 LGALS3P17931 250 aaKnown RBP6.15□□□□□ -1.42
CCDC93-208ENST00000474546 PSMB2P49721 201 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 GAGE2BQ13066 116 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 GAGE2EQ4V326 116 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 SH2D6Q7Z4S9 175 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 DYNAPQ8N1N2 210 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 MAPKAPK5-AS1Q8N8E1 139 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 Q8TAT8 98 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 ITLN2Q8WWU7 325 aaPredicted RBP6.15□□□□□ -1.42
CCDC93-208ENST00000474546 BAALCQ8WXS3 180 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 GAGE2DQ9UEU5 116 aa6.15□□□□□ -1.42
CCDC93-208ENST00000474546 PRKDCP78527 4128 aaKnown RBP6.14□□□□□ -1.43
CCDC93-208ENST00000474546 A0A0G2JNJ9 132 aa6.14□□□□□ -1.43
CCDC93-208ENST00000474546 TRBV6-5A0A0K0K1A5 114 aa6.14□□□□□ -1.43
CCDC93-208ENST00000474546 PRSS29PA6NIE9 313 aa6.14□□□□□ -1.43
CCDC93-208ENST00000474546 E7EQL1 145 aa6.14□□□□□ -1.43
CCDC93-208ENST00000474546 ACYP1P07311 99 aa6.14□□□□□ -1.43
CCDC93-208ENST00000474546 APELAP0DMC3 54 aa6.14□□□□□ -1.43
CCDC93-208ENST00000474546 RPL13AP40429 203 aaKnown RBP6.14□□□□□ -1.43
CCDC93-208ENST00000474546 FBXL19-AS1Q494R0 122 aa6.14□□□□□ -1.43
CCDC93-208ENST00000474546 WFDC3Q8IUB2 231 aa6.14□□□□□ -1.43
CCDC93-208ENST00000474546 APRG1Q8IVJ8 170 aa6.14□□□□□ -1.43
CCDC93-208ENST00000474546 RAX2Q96IS3 184 aa6.14□□□□□ -1.43
CCDC93-208ENST00000474546 AGPAT4-IT1Q9H0P7 198 aa6.14□□□□□ -1.43
CCDC93-208ENST00000474546 CDIP1Q9H305 208 aa6.14□□□□□ -1.43
CCDC93-208ENST00000474546 ZFAND3Q9H8U3 227 aa6.14□□□□□ -1.43
CCDC93-208ENST00000474546 MSRB1Q9NZV6 116 aa6.14□□□□□ -1.43
CCDC93-208ENST00000474546 Q9UFV3 132 aa6.14□□□□□ -1.43
CCDC93-208ENST00000474546 SMAD5-AS1Q9Y6J3 95 aa6.14□□□□□ -1.43
CCDC93-208ENST00000474546 U3KQE9 123 aa6.14□□□□□ -1.43
CCDC93-208ENST00000474546 TRAV26-1A0A087WT03 109 aa6.13□□□□□ -1.43
CCDC93-208ENST00000474546 A0A0J9YY99 117 aa6.13□□□□□ -1.43
CCDC93-208ENST00000474546 H3BT86 120 aa6.13□□□□□ -1.43
CCDC93-208ENST00000474546 M0R2P5 195 aa6.13□□□□□ -1.43
CCDC93-208ENST00000474546 RHODO00212 210 aa6.13□□□□□ -1.43
CCDC93-208ENST00000474546 ARL3P36405 182 aa6.13□□□□□ -1.43
CCDC93-208ENST00000474546 DLX1P56177 255 aa6.13□□□□□ -1.43
CCDC93-208ENST00000474546 FXYD7P58549 80 aa6.13□□□□□ -1.43
CCDC93-208ENST00000474546 FOXE3Q13461 319 aa6.13□□□□□ -1.43
CCDC93-208ENST00000474546 C15orf32Q32M92 178 aa6.13□□□□□ -1.43
CCDC93-208ENST00000474546 TTC32Q5I0X7 151 aa6.13□□□□□ -1.43
CCDC93-208ENST00000474546 NFE4Q86UQ8 179 aa6.13□□□□□ -1.43
CCDC93-208ENST00000474546 C16orf92Q96LL3 132 aa6.13□□□□□ -1.43
CCDC93-208ENST00000474546 ODF3Q96PU9 254 aa6.13□□□□□ -1.43
CCDC93-208ENST00000474546 VKORC1Q9BQB6 163 aa6.13□□□□□ -1.43
CCDC93-208ENST00000474546 YAE1D1Q9NRH1 226 aa6.13□□□□□ -1.43
CCDC93-208ENST00000474546 RYR1P21817 5038 aa6.12□□□□□ -1.43
CCDC93-208ENST00000474546 GAGE12JA6NER3 117 aa6.12□□□□□ -1.43
CCDC93-208ENST00000474546 LEPROTO15243 131 aa6.12□□□□□ -1.43
CCDC93-208ENST00000474546 SLC25A20O43772 301 aa6.12□□□□□ -1.43
CCDC93-208ENST00000474546 GAGE7O76087 117 aa6.12□□□□□ -1.43
CCDC93-208ENST00000474546 ATP5G1P05496 136 aa6.12□□□□□ -1.43
CCDC93-208ENST00000474546 GAGE12FP0CL80 117 aa6.12□□□□□ -1.43
CCDC93-208ENST00000474546 GAGE12GP0CL81 117 aa6.12□□□□□ -1.43
CCDC93-208ENST00000474546 GAGE12IP0CL82 117 aa6.12□□□□□ -1.43
CCDC93-208ENST00000474546 CRIP2P52943 208 aaPredicted RBP6.12□□□□□ -1.43
CCDC93-208ENST00000474546 ATP5G2Q06055 141 aa6.12□□□□□ -1.43
CCDC93-208ENST00000474546 GAGE4Q13068 117 aa6.12□□□□□ -1.43
CCDC93-208ENST00000474546 PRR31Q5SQ13 230 aa6.12□□□□□ -1.43
CCDC93-208ENST00000474546 AMTNQ6UX39 209 aa6.12□□□□□ -1.43
CCDC93-208ENST00000474546 VMO1Q7Z5L0 202 aa6.12□□□□□ -1.43
CCDC93-208ENST00000474546 USMG5Q96IX5 58 aa6.12□□□□□ -1.43
CCDC93-208ENST00000474546 IMUPQ9GZP8 106 aa6.12□□□□□ -1.43
CCDC93-208ENST00000474546 IGHV7-81A0A0B4J1V7 117 aa6.11□□□□□ -1.43
CCDC93-208ENST00000474546 TRBV30A0A0K0K1B3 111 aa6.11□□□□□ -1.43
CCDC93-208ENST00000474546 H3BVH4 76 aa6.11□□□□□ -1.43
CCDC93-208ENST00000474546 NDUFA4O00483 81 aa6.11□□□□□ -1.43
CCDC93-208ENST00000474546 IGHV3-30P01768 117 aa6.11□□□□□ -1.43
CCDC93-208ENST00000474546 CFC1BP0CG36 223 aa6.11□□□□□ -1.43
CCDC93-208ENST00000474546 CFC1P0CG37 223 aa6.11□□□□□ -1.43
CCDC93-208ENST00000474546 IGHV3-30-5P0DP03 117 aa6.11□□□□□ -1.43
CCDC93-208ENST00000474546 IFITM1P13164 125 aa6.11□□□□□ -1.43
CCDC93-208ENST00000474546 ID1P41134 155 aa6.11□□□□□ -1.43
CCDC93-208ENST00000474546 UBE2E1P51965 193 aa6.11□□□□□ -1.43
CCDC93-208ENST00000474546 NSUN5P1Q3KNT7 163 aa6.11□□□□□ -1.43
CCDC93-208ENST00000474546 ZNF876PQ49A33 203 aa6.11□□□□□ -1.43
CCDC93-208ENST00000474546 ANKRD29Q8N6D5 301 aa6.11□□□□□ -1.43
CCDC93-208ENST00000474546 RASL10AQ92737 203 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms