RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 PRADC1Q9BSG0 188 aa8.16□□□□□ -1.1
LSS-208ENST00000474319 TRAV41A0A0B4J266 112 aa8.15□□□□□ -1.1
LSS-208ENST00000474319 SMIM20Q8N5G0 67 aa8.15□□□□□ -1.1
LSS-208ENST00000474319 GATD1Q8NB37 220 aa8.15□□□□□ -1.1
LSS-208ENST00000474319 NIPBLQ6KC79 2804 aaeCLIP8.15□□□□□ -1.1
LSS-208ENST00000474319 NPFFO15130 113 aa8.15□□□□□ -1.1
LSS-208ENST00000474319 SUMO2P61956 95 aaKnown RBP8.15□□□□□ -1.1
LSS-208ENST00000474319 SLC50A1Q9BRV3 221 aa8.15□□□□□ -1.1
LSS-208ENST00000474319 SMIM2Q9BVW6 85 aa8.15□□□□□ -1.1
LSS-208ENST00000474319 LINC01549A6NIU2 74 aa8.15□□□□□ -1.11
LSS-208ENST00000474319 CKS1BP61024 79 aa8.15□□□□□ -1.11
LSS-208ENST00000474319 Q8N6K4 173 aa8.15□□□□□ -1.11
LSS-208ENST00000474319 A0A087WX48 190 aa8.14□□□□□ -1.11
LSS-208ENST00000474319 PRSS29PA6NIE9 313 aa8.14□□□□□ -1.11
LSS-208ENST00000474319 PRM2P04554 102 aa8.14□□□□□ -1.11
LSS-208ENST00000474319 IGHV4-38-2P0DP08 117 aa8.14□□□□□ -1.11
LSS-208ENST00000474319 OR5A1Q8NGJ0 315 aa8.14□□□□□ -1.11
LSS-208ENST00000474319 CENPVL3A0A0U1RRI6 287 aa8.14□□□□□ -1.11
LSS-208ENST00000474319 ZNF688P0C7X2 276 aa8.14□□□□□ -1.11
LSS-208ENST00000474319 ASIPP42127 132 aa8.14□□□□□ -1.11
LSS-208ENST00000474319 C10orf99Q6UWK7 81 aa8.14□□□□□ -1.11
LSS-208ENST00000474319 RASL10AQ92737 203 aa8.14□□□□□ -1.11
LSS-208ENST00000474319 SIRPDQ9H106 197 aa8.14□□□□□ -1.11
LSS-208ENST00000474319 H3BUX3 64 aa8.14□□□□□ -1.11
LSS-208ENST00000474319 ZFP2Q6ZN57 461 aa8.14□□□□□ -1.11
LSS-208ENST00000474319 GEMIN7Q9H840 131 aaKnown RBP8.14□□□□□ -1.11
LSS-208ENST00000474319 IGLV2-18A0A075B6J9 118 aa8.13□□□□□ -1.11
LSS-208ENST00000474319 ADARB2-AS1A8MUL3 147 aa8.13□□□□□ -1.11
LSS-208ENST00000474319 CD7P09564 240 aa8.13□□□□□ -1.11
LSS-208ENST00000474319 RNASE13Q5GAN3 156 aaKnown RBP8.13□□□□□ -1.11
LSS-208ENST00000474319 BEX4Q9NWD9 120 aaPredicted RBP8.13□□□□□ -1.11
LSS-208ENST00000474319 KLK9Q9UKQ9 250 aa8.13□□□□□ -1.11
LSS-208ENST00000474319 LMO4P61968 165 aa8.13□□□□□ -1.11
LSS-208ENST00000474319 H7C1H1 209 aa8.12□□□□□ -1.11
LSS-208ENST00000474319 TP53TG1Q9Y2A0 90 aa8.12□□□□□ -1.11
LSS-208ENST00000474319 F8VRH5 84 aa8.12□□□□□ -1.11
LSS-208ENST00000474319 SCGB1C2P0DMR2 95 aa8.12□□□□□ -1.11
LSS-208ENST00000474319 NPC2P61916 151 aa8.12□□□□□ -1.11
LSS-208ENST00000474319 GAGE13Q4V321 117 aa8.12□□□□□ -1.11
LSS-208ENST00000474319 RAX2Q96IS3 184 aa8.12□□□□□ -1.11
LSS-208ENST00000474319 UBE2E1P51965 193 aa8.12□□□□□ -1.11
LSS-208ENST00000474319 C20orf78Q9BR46 151 aa8.12□□□□□ -1.11
LSS-208ENST00000474319 RHPN1-AS1Q9BWJ2 59 aa8.12□□□□□ -1.11
LSS-208ENST00000474319 MXRA5Q9NR99 2828 aa8.12□□□□□ -1.11
LSS-208ENST00000474319 MYMXA0A1B0GTQ4 84 aa8.11□□□□□ -1.11
LSS-208ENST00000474319 MINOS1Q5TGZ0 78 aa8.11□□□□□ -1.11
LSS-208ENST00000474319 MINOS1-NBL1R4GNA1 71 aa8.11□□□□□ -1.11
LSS-208ENST00000474319 ZNF56Q15929 161 aa8.11□□□□□ -1.11
LSS-208ENST00000474319 C5orf56Q8N8D9 126 aa8.11□□□□□ -1.11
LSS-208ENST00000474319 BAALCQ8WXS3 180 aa8.11□□□□□ -1.11
LSS-208ENST00000474319 SPAG8Q99932 426 aaPredicted RBP8.11□□□□□ -1.11
LSS-208ENST00000474319 UBR5O95071 2799 aaPredicted RBP8.11□□□□□ -1.11
LSS-208ENST00000474319 HOXA3O43365 443 aaPredicted RBP8.11□□□□□ -1.11
LSS-208ENST00000474319 LGALS1P09382 135 aaKnown RBP8.11□□□□□ -1.11
LSS-208ENST00000474319 KHDC1LQ5JSQ8 128 aa8.11□□□□□ -1.11
LSS-208ENST00000474319 PHLDA1Q8WV24 401 aaPredicted RBP8.11□□□□□ -1.11
LSS-208ENST00000474319 MUC4Q99102 2169 aa8.11□□□□□ -1.11
LSS-208ENST00000474319 FOXI2Q6ZQN5 318 aa8.1□□□□□ -1.11
LSS-208ENST00000474319 ZFAND2AQ8N6M9 145 aa8.1□□□□□ -1.11
LSS-208ENST00000474319 C11orf44Q8N8P7 122 aa8.1□□□□□ -1.11
LSS-208ENST00000474319 TRAV21A0A0B4J279 112 aa8.1□□□□□ -1.11
LSS-208ENST00000474319 C11orf86A6NJI1 115 aa8.1□□□□□ -1.11
LSS-208ENST00000474319 AJUBAQ96IF1 538 aa8.1□□□□□ -1.11
LSS-208ENST00000474319 Q96MF0 132 aa8.1□□□□□ -1.11
LSS-208ENST00000474319 DPH3P1Q9H4G8 78 aa8.1□□□□□ -1.11
LSS-208ENST00000474319 ZMAT4Q9H898 229 aa8.1□□□□□ -1.11
LSS-208ENST00000474319 GAGE12HA6NDE8 117 aa8.1□□□□□ -1.11
LSS-208ENST00000474319 PLNP26678 52 aa8.1□□□□□ -1.11
LSS-208ENST00000474319 PSMG4Q5JS54 123 aa8.1□□□□□ -1.11
LSS-208ENST00000474319 CNFNQ9BYD5 112 aa8.1□□□□□ -1.11
LSS-208ENST00000474319 KNCNA6PVL3 124 aa8.09□□□□□ -1.11
LSS-208ENST00000474319 FAM159AQ6UWV7 190 aa8.09□□□□□ -1.11
LSS-208ENST00000474319 GPHB5Q86YW7 130 aa8.09□□□□□ -1.11
LSS-208ENST00000474319 RRN3P1Q2M238 152 aa8.09□□□□□ -1.11
LSS-208ENST00000474319 SIGMAR1Q99720 223 aa8.09□□□□□ -1.11
LSS-208ENST00000474319 TRBV7-1A0A0A6YYK4 115 aa8.09□□□□□ -1.11
LSS-208ENST00000474319 E9PLD3 99 aa8.09□□□□□ -1.11
LSS-208ENST00000474319 AVPP01185 164 aa8.09□□□□□ -1.11
LSS-208ENST00000474319 SPANXB1Q9NS25 103 aaPredicted RBP8.09□□□□□ -1.11
LSS-208ENST00000474319 ZNF580Q9UK33 172 aa8.09□□□□□ -1.11
LSS-208ENST00000474319 SPINK13Q1W4C9 94 aa8.08□□□□□ -1.12
LSS-208ENST00000474319 C10orf105Q8TEF2 133 aa8.08□□□□□ -1.12
LSS-208ENST00000474319 J3QKU1 62 aa8.08□□□□□ -1.12
LSS-208ENST00000474319 MSMBP08118 114 aa8.08□□□□□ -1.12
LSS-208ENST00000474319 Q1RN00 199 aa8.08□□□□□ -1.12
LSS-208ENST00000474319 C9orf47Q6ZRZ4 202 aa8.08□□□□□ -1.12
LSS-208ENST00000474319 MDFICQ9P1T7 246 aa8.08□□□□□ -1.12
LSS-208ENST00000474319 SMPXQ9UHP9 88 aa8.08□□□□□ -1.12
LSS-208ENST00000474319 ORMDL2Q53FV1 153 aa8.08□□□□□ -1.12
LSS-208ENST00000474319 TM2D2Q9BX73 214 aa8.08□□□□□ -1.12
LSS-208ENST00000474319 MOB4Q9Y3A3 225 aa8.08□□□□□ -1.12
LSS-208ENST00000474319 TRAV2A0A0B4J234 112 aa8.07□□□□□ -1.12
LSS-208ENST00000474319 TRBV7-9A0A0J9YWB2 115 aa8.07□□□□□ -1.12
LSS-208ENST00000474319 EBI3Q14213 229 aa8.07□□□□□ -1.12
LSS-208ENST00000474319 CEMP1Q6PRD7 247 aaPredicted RBP8.07□□□□□ -1.12
LSS-208ENST00000474319 P0DMU3 169 aa8.07□□□□□ -1.12
LSS-208ENST00000474319 FAM231AP0DMU4 169 aa8.07□□□□□ -1.12
LSS-208ENST00000474319 FAM231CP0DMU5 169 aa8.07□□□□□ -1.12
LSS-208ENST00000474319 RNASE3P12724 160 aaKnown RBP8.07□□□□□ -1.12
LSS-208ENST00000474319 C9orf139Q6ZV77 190 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms