RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 HLA-DRB4X5D2U9 266 aa8.21□□□□□ -1.1
C9orf3-214ENST00000473778 MT-ATP8P03928 68 aa8.2□□□□□ -1.1
C9orf3-214ENST00000473778 PLNP26678 52 aa8.2□□□□□ -1.1
C9orf3-214ENST00000473778 C10orf99Q6UWK7 81 aa8.2□□□□□ -1.1
C9orf3-214ENST00000473778 C10orf105Q8TEF2 133 aa8.2□□□□□ -1.1
C9orf3-214ENST00000473778 BAALCQ8WXS3 180 aa8.2□□□□□ -1.1
C9orf3-214ENST00000473778 SCGB3A1Q96QR1 104 aa8.2□□□□□ -1.1
C9orf3-214ENST00000473778 KIF25-AS1Q9Y6Z4 181 aa8.2□□□□□ -1.1
C9orf3-214ENST00000473778 TRAV12-1A0A0B4J245 112 aa8.2□□□□□ -1.1
C9orf3-214ENST00000473778 A0A1B0GWB2 263 aa8.2□□□□□ -1.1
C9orf3-214ENST00000473778 H7C1H1 209 aa8.2□□□□□ -1.1
C9orf3-214ENST00000473778 IGLV1-40P01703 118 aa8.2□□□□□ -1.1
C9orf3-214ENST00000473778 C2orf66Q6UXQ4 117 aa8.2□□□□□ -1.1
C9orf3-214ENST00000473778 TRBV7-3A0A075B6L6 115 aa8.19□□□□□ -1.1
C9orf3-214ENST00000473778 LCE2BO14633 110 aa8.19□□□□□ -1.1
C9orf3-214ENST00000473778 TSHBP01222 138 aa8.19□□□□□ -1.1
C9orf3-214ENST00000473778 CRYGDP07320 174 aa8.19□□□□□ -1.1
C9orf3-214ENST00000473778 CFHR3Q02985 330 aa8.19□□□□□ -1.1
C9orf3-214ENST00000473778 FOXI1Q12951 378 aa8.19□□□□□ -1.1
C9orf3-214ENST00000473778 PSMG4Q5JS54 123 aa8.19□□□□□ -1.1
C9orf3-214ENST00000473778 Q6ZUT4 128 aa8.19□□□□□ -1.1
C9orf3-214ENST00000473778 PRO0461Q9UI25 63 aa8.19□□□□□ -1.1
C9orf3-214ENST00000473778 IGSF10Q6WRI0 2623 aa8.19□□□□□ -1.1
C9orf3-214ENST00000473778 USP9YO00507 2555 aaPredicted RBP8.19□□□□□ -1.1
C9orf3-214ENST00000473778 B5MCH6 92 aa8.19□□□□□ -1.1
C9orf3-214ENST00000473778 ORMDL2Q53FV1 153 aa8.19□□□□□ -1.1
C9orf3-214ENST00000473778 AMTNQ6UX39 209 aa8.19□□□□□ -1.1
C9orf3-214ENST00000473778 DCANP1Q8TF63 244 aa8.19□□□□□ -1.1
C9orf3-214ENST00000473778 USMG5Q96IX5 58 aa8.19□□□□□ -1.1
C9orf3-214ENST00000473778 PRORYQ9H606 182 aa8.19□□□□□ -1.1
C9orf3-214ENST00000473778 KLLNB2CW77 178 aa8.18□□□□□ -1.1
C9orf3-214ENST00000473778 DUSP14O95147 198 aaKnown RBP8.18□□□□□ -1.1
C9orf3-214ENST00000473778 PIMREGQ9BSJ6 248 aa8.18□□□□□ -1.1
C9orf3-214ENST00000473778 DAZ1Q9NQZ3 744 aaKnown RBP8.18□□□□□ -1.1
C9orf3-214ENST00000473778 CENPEQ02224 2701 aa8.18□□□□□ -1.1
C9orf3-214ENST00000473778 KMT2BQ9UMN6 2715 aaPredicted RBP8.18□□□□□ -1.1
C9orf3-214ENST00000473778 POLQO75417 2590 aa8.18□□□□□ -1.1
C9orf3-214ENST00000473778 PRSS29PA6NIE9 313 aa8.18□□□□□ -1.1
C9orf3-214ENST00000473778 NXPH4O95158 308 aa8.18□□□□□ -1.1
C9orf3-214ENST00000473778 BRI3O95415 125 aa8.18□□□□□ -1.1
C9orf3-214ENST00000473778 EMP1P54849 157 aa8.18□□□□□ -1.1
C9orf3-214ENST00000473778 XGP55808 180 aa8.18□□□□□ -1.1
C9orf3-214ENST00000473778 POM121L12Q8N7R1 296 aa8.18□□□□□ -1.1
C9orf3-214ENST00000473778 C1QTNF4Q9BXJ3 329 aa8.18□□□□□ -1.1
C9orf3-214ENST00000473778 DOPEY1Q5JWR5 2465 aa8.17□□□□□ -1.1
C9orf3-214ENST00000473778 A0A087WWL8 130 aa8.17□□□□□ -1.1
C9orf3-214ENST00000473778 SLC25A16P16260 332 aa8.17□□□□□ -1.1
C9orf3-214ENST00000473778 C12orf74Q32Q52 190 aa8.17□□□□□ -1.1
C9orf3-214ENST00000473778 NRGNQ92686 78 aa8.17□□□□□ -1.1
C9orf3-214ENST00000473778 CCL19Q99731 98 aa8.17□□□□□ -1.1
C9orf3-214ENST00000473778 MYMXA0A1B0GTQ4 84 aa8.17□□□□□ -1.1
C9orf3-214ENST00000473778 H3BUA1 57 aa8.17□□□□□ -1.1
C9orf3-214ENST00000473778 LGALS1P09382 135 aaKnown RBP8.17□□□□□ -1.1
C9orf3-214ENST00000473778 MED14OSP0DP75 135 aa8.17□□□□□ -1.1
C9orf3-214ENST00000473778 RPL39P62891 51 aaKnown RBP8.17□□□□□ -1.1
C9orf3-214ENST00000473778 ATP6V0E2Q8NHE4 81 aa8.17□□□□□ -1.1
C9orf3-214ENST00000473778 HIST1H4GQ99525 98 aa8.17□□□□□ -1.1
C9orf3-214ENST00000473778 TRAV12-3A0A0B4J271 114 aa8.16□□□□□ -1.1
C9orf3-214ENST00000473778 PLEKHB2Q96CS7 222 aa8.16□□□□□ -1.1
C9orf3-214ENST00000473778 PRADC1Q9BSG0 188 aa8.16□□□□□ -1.1
C9orf3-214ENST00000473778 USP24Q9UPU5 2620 aa8.16□□□□□ -1.1
C9orf3-214ENST00000473778 IGLV4-69A0A075B6H9 119 aa8.15□□□□□ -1.1
C9orf3-214ENST00000473778 COX6B1P14854 86 aa8.15□□□□□ -1.1
C9orf3-214ENST00000473778 ATP5J2P56134 94 aa8.15□□□□□ -1.1
C9orf3-214ENST00000473778 SUMO4Q6EEV6 95 aa8.15□□□□□ -1.1
C9orf3-214ENST00000473778 KLHL30-AS1Q8NEE0 82 aa8.15□□□□□ -1.1
C9orf3-214ENST00000473778 ZNF469Q96JG9 3925 aaPredicted RBP8.15□□□□□ -1.1
C9orf3-214ENST00000473778 TRAV12-2A0A075B6T6 113 aa8.15□□□□□ -1.1
C9orf3-214ENST00000473778 MSMBP08118 114 aa8.15□□□□□ -1.1
C9orf3-214ENST00000473778 IGHV4OR15-8A0A075B7B6 117 aa8.14□□□□□ -1.11
C9orf3-214ENST00000473778 A0A087WW49 117 aa8.14□□□□□ -1.11
C9orf3-214ENST00000473778 IGIPA6NJ69 53 aa8.14□□□□□ -1.11
C9orf3-214ENST00000473778 C11orf86A6NJI1 115 aa8.14□□□□□ -1.11
C9orf3-214ENST00000473778 POLR2KP53803 58 aaKnown RBP8.14□□□□□ -1.11
C9orf3-214ENST00000473778 FHL3Q13643 280 aa8.14□□□□□ -1.11
C9orf3-214ENST00000473778 TAL2Q16559 108 aa8.14□□□□□ -1.11
C9orf3-214ENST00000473778 MORN3Q6PF18 240 aaPredicted RBP8.14□□□□□ -1.11
C9orf3-214ENST00000473778 SMIM20Q8N5G0 67 aa8.14□□□□□ -1.11
C9orf3-214ENST00000473778 TP53TG1Q9Y2A0 90 aa8.14□□□□□ -1.11
C9orf3-214ENST00000473778 IGKV3-20P01619 116 aa8.14□□□□□ -1.11
C9orf3-214ENST00000473778 CD7P09564 240 aa8.14□□□□□ -1.11
C9orf3-214ENST00000473778 ZNF688P0C7X2 276 aa8.14□□□□□ -1.11
C9orf3-214ENST00000473778 PSMB8P28062 276 aa8.14□□□□□ -1.11
C9orf3-214ENST00000473778 RPL32P62910 135 aaKnown RBP8.14□□□□□ -1.11
C9orf3-214ENST00000473778 RRN3P1Q2M238 152 aa8.14□□□□□ -1.11
C9orf3-214ENST00000473778 ZFAND6Q6FIF0 208 aa8.14□□□□□ -1.11
C9orf3-214ENST00000473778 ZFP2Q6ZN57 461 aa8.14□□□□□ -1.11
C9orf3-214ENST00000473778 MDFICQ9P1T7 246 aa8.14□□□□□ -1.11
C9orf3-214ENST00000473778 MYO18BQ8IUG5 2567 aa8.14□□□□□ -1.11
C9orf3-214ENST00000473778 CHD6Q8TD26 2715 aa8.13□□□□□ -1.11
C9orf3-214ENST00000473778 IGHV4-59P01825 116 aa8.13□□□□□ -1.11
C9orf3-214ENST00000473778 FAM159AQ6UWV7 190 aa8.13□□□□□ -1.11
C9orf3-214ENST00000473778 CREBBPQ92793 2442 aa8.13□□□□□ -1.11
C9orf3-214ENST00000473778 NFE4Q86UQ8 179 aa8.13□□□□□ -1.11
C9orf3-214ENST00000473778 TEX29Q8N6K0 151 aa8.13□□□□□ -1.11
C9orf3-214ENST00000473778 ANKRD17O75179 2603 aaKnown RBP8.13□□□□□ -1.11
C9orf3-214ENST00000473778 ZNF815PA8K554 130 aa8.12□□□□□ -1.11
C9orf3-214ENST00000473778 TSPEAR-AS2P59090 65 aa8.12□□□□□ -1.11
C9orf3-214ENST00000473778 FAM74A4Q5TZK3 123 aa8.12□□□□□ -1.11
C9orf3-214ENST00000473778 TNFRSF18Q9Y5U5 241 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms