RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 SPATA12Q7Z6I5 190 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 NHLRC2Q8NBF2 726 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 WDR83OSQ9Y284 106 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 SPCS1Q9Y6A9 102 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 V9GYV3 84 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 DEFB131BA0A096LNP1 70 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 TRAV2A0A0B4J234 112 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 A0A1B0GW15 77 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 A0A1W2PPM0 123 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 FAM231BA6NCW3 169 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 I3L2K1 104 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 SCGB2A1O75556 95 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 APOHP02749 345 aaPredicted RBP5.01□□□□□ -1.61
CKS1B-205ENST00000473344 RBMY1A1P0DJD3 496 aaKnown RBP5.01□□□□□ -1.61
CKS1B-205ENST00000473344 RBMY1CP0DJD4 496 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 NPPCP23582 126 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 GCHFRP30047 84 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 ERHP84090 104 aaKnown RBP5.01□□□□□ -1.61
CKS1B-205ENST00000473344 RBMY1FQ15415 496 aaKnown RBP5.01□□□□□ -1.61
CKS1B-205ENST00000473344 IBA57Q5T440 356 aaKnown RBP5.01□□□□□ -1.61
CKS1B-205ENST00000473344 RNASEKQ6P5S7 137 aaKnown RBP5.01□□□□□ -1.61
CKS1B-205ENST00000473344 PQLC2Q6ZP29 291 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 H2BFWTQ7Z2G1 175 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 BOD1L2Q8IYS8 172 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 POM121L12Q8N7R1 296 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 ATP6V0E2Q8NHE4 81 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 ZNF414Q96IQ9 312 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 CLUHP3Q96NS8 147 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 GEMIN7Q9H840 131 aaKnown RBP5.01□□□□□ -1.61
CKS1B-205ENST00000473344 TMEM14BQ9NUH8 114 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 RFNGQ9Y644 331 aa5.01□□□□□ -1.61
CKS1B-205ENST00000473344 TRAV8-6A0A0B4J262 113 aa5□□□□□ -1.61
CKS1B-205ENST00000473344 A0A1B0GVY2 172 aa5□□□□□ -1.61
CKS1B-205ENST00000473344 A0A1W2PRE2 83 aa5□□□□□ -1.61
CKS1B-205ENST00000473344 TMEM262E9PQX1 116 aa5□□□□□ -1.61
CKS1B-205ENST00000473344 ZNF688P0C7X2 276 aa5□□□□□ -1.61
CKS1B-205ENST00000473344 ATP5G3P48201 142 aa5□□□□□ -1.61
CKS1B-205ENST00000473344 CRYBA4P53673 196 aa5□□□□□ -1.61
CKS1B-205ENST00000473344 PRCDQ00LT1 54 aa5□□□□□ -1.61
CKS1B-205ENST00000473344 CT83Q5H943 113 aa5□□□□□ -1.61
CKS1B-205ENST00000473344 TRPT1Q86TN4 253 aaKnown RBP5□□□□□ -1.61
CKS1B-205ENST00000473344 UBE2DNLQ8IWF7 75 aa5□□□□□ -1.61
CKS1B-205ENST00000473344 ZNF114Q8NC26 417 aa5□□□□□ -1.61
CKS1B-205ENST00000473344 OR52E5Q8NH55 327 aa5□□□□□ -1.61
CKS1B-205ENST00000473344 ZNF479Q96JC4 524 aa5□□□□□ -1.61
CKS1B-205ENST00000473344 METTL26Q96S19 204 aa5□□□□□ -1.61
CKS1B-205ENST00000473344 KNCNA6PVL3 124 aa4.99□□□□□ -1.61
CKS1B-205ENST00000473344 TSPAN13O95857 204 aa4.99□□□□□ -1.61
CKS1B-205ENST00000473344 ARL14EPLP0DKL9 152 aa4.99□□□□□ -1.61
CKS1B-205ENST00000473344 SUB1P53999 127 aaKnown RBP eCLIP4.99□□□□□ -1.61
CKS1B-205ENST00000473344 HSPE1P61604 102 aaKnown RBP4.99□□□□□ -1.61
CKS1B-205ENST00000473344 ARL16Q0P5N6 197 aa4.99□□□□□ -1.61
CKS1B-205ENST00000473344 SMAGPQ0VAQ4 97 aa4.99□□□□□ -1.61
CKS1B-205ENST00000473344 GAGE5Q13069 117 aa4.99□□□□□ -1.61
CKS1B-205ENST00000473344 GAGE6Q13070 117 aa4.99□□□□□ -1.61
CKS1B-205ENST00000473344 SLAQ13239 276 aa4.99□□□□□ -1.61
CKS1B-205ENST00000473344 GPR82Q96P67 336 aa4.99□□□□□ -1.61
CKS1B-205ENST00000473344 NDFIP1Q9BT67 221 aa4.99□□□□□ -1.61
CKS1B-205ENST00000473344 C1QTNF4Q9BXJ3 329 aa4.99□□□□□ -1.61
CKS1B-205ENST00000473344 MRPL32Q9BYC8 188 aaKnown RBP4.99□□□□□ -1.61
CKS1B-205ENST00000473344 NPVFQ9HCQ7 196 aa4.99□□□□□ -1.61
CKS1B-205ENST00000473344 HIGD1BQ9P298 99 aa4.99□□□□□ -1.61
CKS1B-205ENST00000473344 X6R8D5 127 aa4.99□□□□□ -1.61
CKS1B-205ENST00000473344 HSPG2P98160 4391 aa4.99□□□□□ -1.61
CKS1B-205ENST00000473344 IGLV2-18A0A075B6J9 118 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 TRAV26-1A0A087WT03 109 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 A8MWL6 223 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 H3BUT2 72 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 K7EQG2 157 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 RTL8CO15255 209 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 GIG44P09565 113 aaPredicted RBP4.98□□□□□ -1.61
CKS1B-205ENST00000473344 SNRPD3P62318 126 aaKnown RBP4.98□□□□□ -1.61
CKS1B-205ENST00000473344 HBBP68871 147 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 KIR3DS1Q14943 382 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 TAL2Q16559 108 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 C12orf74Q32Q52 190 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 LGALS9BQ3B8N2 356 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 SPINK9Q5DT21 86 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 CENPWQ5EE01 88 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 LINC01545Q5VT33 79 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 EBLN2Q6P2I7 272 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 ATOH7Q8N100 152 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 FAM19A2Q8N3H0 131 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 GFRA4Q9GZZ7 299 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 GTSF1LQ9H1H1 148 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 FNDC4Q9H6D8 234 aaPredicted RBP4.98□□□□□ -1.61
CKS1B-205ENST00000473344 CELA1Q9UNI1 258 aa4.98□□□□□ -1.61
CKS1B-205ENST00000473344 PMS2P5A8MQ11 134 aa4.97□□□□□ -1.61
CKS1B-205ENST00000473344 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.97□□□□□ -1.61
CKS1B-205ENST00000473344 H3BS24 57 aa4.97□□□□□ -1.61
CKS1B-205ENST00000473344 J3KRW8 73 aa4.97□□□□□ -1.61
CKS1B-205ENST00000473344 IGKV1-5P01602 117 aa4.97□□□□□ -1.61
CKS1B-205ENST00000473344 SPART-AS1P0CW21 52 aa4.97□□□□□ -1.61
CKS1B-205ENST00000473344 MGST1P10620 155 aaKnown RBP4.97□□□□□ -1.61
CKS1B-205ENST00000473344 HLA-DRB4P13762 266 aa4.97□□□□□ -1.61
CKS1B-205ENST00000473344 EMP1P54849 157 aa4.97□□□□□ -1.61
CKS1B-205ENST00000473344 TEPPQ6URK8 271 aa4.97□□□□□ -1.61
CKS1B-205ENST00000473344 CSNK1G2-AS1Q8NCQ2 148 aa4.97□□□□□ -1.61
CKS1B-205ENST00000473344 DCANP1Q8TF63 244 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms