RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 STARD9Q9P2P6 4700 aa13.93□□□□□ -0.18
SF1-213ENST00000472725 PPP1R2P9O14990 202 aa13.93□□□□□ -0.18
SF1-213ENST00000472725 NUDT3O95989 172 aa13.93□□□□□ -0.18
SF1-213ENST00000472725 TRGC1P0CF51 173 aa13.93□□□□□ -0.18
SF1-213ENST00000472725 RHOHQ15669 191 aa13.93□□□□□ -0.18
SF1-213ENST00000472725 MRPL23Q16540 153 aaKnown RBP13.93□□□□□ -0.18
SF1-213ENST00000472725 PRADC1Q9BSG0 188 aa13.93□□□□□ -0.18
SF1-213ENST00000472725 SEC11CQ9BY50 192 aa13.93□□□□□ -0.18
SF1-213ENST00000472725 JPT2Q9H910 190 aa13.93□□□□□ -0.18
SF1-213ENST00000472725 SMIM17P0DL12 118 aa13.92□□□□□ -0.18
SF1-213ENST00000472725 RNF212Q495C1 297 aa13.92□□□□□ -0.18
SF1-213ENST00000472725 SH2D6Q7Z4S9 175 aa13.92□□□□□ -0.18
SF1-213ENST00000472725 SLC25A29Q8N8R3 303 aa13.92□□□□□ -0.18
SF1-213ENST00000472725 BORCS7Q96B45 105 aa13.92□□□□□ -0.18
SF1-213ENST00000472725 SAMD10Q9BYL1 202 aa13.92□□□□□ -0.18
SF1-213ENST00000472725 F8W036 122 aa13.91□□□□□ -0.18
SF1-213ENST00000472725 NTF3P20783 257 aa13.91□□□□□ -0.18
SF1-213ENST00000472725 FAM3BP58499 235 aaPredicted RBP13.91□□□□□ -0.18
SF1-213ENST00000472725 FAM74A4Q5TZK3 123 aa13.91□□□□□ -0.18
SF1-213ENST00000472725 A0A087WWL8 130 aa13.9□□□□□ -0.18
SF1-213ENST00000472725 A0A096LPF7 62 aa13.9□□□□□ -0.18
SF1-213ENST00000472725 IGHV3-73A0A0B4J1V6 119 aa13.9□□□□□ -0.18
SF1-213ENST00000472725 MUC21A0A0G2JKD1 596 aa13.9□□□□□ -0.18
SF1-213ENST00000472725 MUC21A0A140T8X8 626 aa13.9□□□□□ -0.18
SF1-213ENST00000472725 HIGD1CA8MV81 97 aa13.9□□□□□ -0.18
SF1-213ENST00000472725 RAB4BP61018 213 aa13.9□□□□□ -0.18
SF1-213ENST00000472725 ANAPC16Q96DE5 110 aa13.9□□□□□ -0.18
SF1-213ENST00000472725 NAT8BQ9UHF3 227 aa13.9□□□□□ -0.18
SF1-213ENST00000472725 DYNC2H1Q8NCM8 4307 aaKnown RBP13.9□□□□□ -0.18
SF1-213ENST00000472725 MT-ND4LP03901 98 aa13.89□□□□□ -0.19
SF1-213ENST00000472725 GYPEP15421 78 aa13.89□□□□□ -0.19
SF1-213ENST00000472725 CCL18P55774 89 aa13.89□□□□□ -0.19
SF1-213ENST00000472725 KIF25-AS1Q9Y6Z4 181 aa13.89□□□□□ -0.19
SF1-213ENST00000472725 TRBV10-1A0A0K0K1A3 114 aa13.88□□□□□ -0.19
SF1-213ENST00000472725 SMIM27A0A1W2PRY6 76 aa13.88□□□□□ -0.19
SF1-213ENST00000472725 K7EQD1 137 aa13.88□□□□□ -0.19
SF1-213ENST00000472725 ADCYAP1P18509 176 aa13.88□□□□□ -0.19
SF1-213ENST00000472725 SRIP30626 198 aa13.88□□□□□ -0.19
SF1-213ENST00000472725 TWIST1Q15672 202 aa13.88□□□□□ -0.19
SF1-213ENST00000472725 SMIM15Q7Z3B0 74 aa13.88□□□□□ -0.19
SF1-213ENST00000472725 C14orf178Q8N769 122 aaPredicted RBP13.88□□□□□ -0.19
SF1-213ENST00000472725 PGLYRP4Q96LB8 373 aa13.88□□□□□ -0.19
SF1-213ENST00000472725 A0A1B0GUT8 65 aa13.87□□□□□ -0.19
SF1-213ENST00000472725 LY6G6CO95867 125 aa13.87□□□□□ -0.19
SF1-213ENST00000472725 SSTP61278 116 aa13.87□□□□□ -0.19
SF1-213ENST00000472725 C10orf91Q5T1B1 145 aa13.87□□□□□ -0.19
SF1-213ENST00000472725 NEGR1Q7Z3B1 354 aa13.87□□□□□ -0.19
SF1-213ENST00000472725 DPH3P1Q9H4G8 78 aa13.87□□□□□ -0.19
SF1-213ENST00000472725 MSRB1Q9NZV6 116 aa13.87□□□□□ -0.19
SF1-213ENST00000472725 NUP35Q8NFH5 326 aa13.86□□□□□ -0.19
SF1-213ENST00000472725 LINC00315P59091 139 aa13.85□□□□□ -0.19
SF1-213ENST00000472725 RIGQ13278 110 aa13.85□□□□□ -0.19
SF1-213ENST00000472725 ZNF56Q15929 161 aa13.85□□□□□ -0.19
SF1-213ENST00000472725 Q6ZSN1 163 aa13.85□□□□□ -0.19
SF1-213ENST00000472725 UBE2DNLQ8IWF7 75 aa13.85□□□□□ -0.19
SF1-213ENST00000472725 CARHSP1Q9Y2V2 147 aaKnown RBP13.85□□□□□ -0.19
SF1-213ENST00000472725 EVI2AP22794 236 aa13.84□□□□□ -0.19
SF1-213ENST00000472725 TIRAPP58753 221 aa13.84□□□□□ -0.19
SF1-213ENST00000472725 A0A1B0GW15 77 aa13.83□□□□□ -0.2
SF1-213ENST00000472725 F5H697 171 aa13.83□□□□□ -0.2
SF1-213ENST00000472725 H7C1H1 209 aa13.83□□□□□ -0.2
SF1-213ENST00000472725 FRZBQ92765 325 aa13.83□□□□□ -0.2
SF1-213ENST00000472725 ESRGQ1W209 222 aa13.82□□□□□ -0.2
SF1-213ENST00000472725 UPK3BQ9BT76 320 aa13.82□□□□□ -0.2
SF1-213ENST00000472725 CTDSP1Q9GZU7 261 aa13.82□□□□□ -0.2
SF1-213ENST00000472725 LOC100131303A0A0U1RQF7 123 aa13.81□□□□□ -0.2
SF1-213ENST00000472725 LINC00694P0DN24 101 aa13.81□□□□□ -0.2
SF1-213ENST00000472725 RPL36AP83881 106 aaKnown RBP13.81□□□□□ -0.2
SF1-213ENST00000472725 LYPD5Q6UWN5 251 aa13.81□□□□□ -0.2
SF1-213ENST00000472725 RPL36ALQ969Q0 106 aaKnown RBP13.81□□□□□ -0.2
SF1-213ENST00000472725 IMMP2LQ96T52 175 aa13.81□□□□□ -0.2
SF1-213ENST00000472725 TMEM191AQ9H0A3 160 aa13.81□□□□□ -0.2
SF1-213ENST00000472725 MRPS16Q9Y3D3 137 aaKnown RBP13.81□□□□□ -0.2
SF1-213ENST00000472725 LINC00588Q9Y4M8 146 aa13.81□□□□□ -0.2
SF1-213ENST00000472725 S100A8P05109 93 aa13.8□□□□□ -0.2
SF1-213ENST00000472725 MGPP08493 103 aa13.8□□□□□ -0.2
SF1-213ENST00000472725 TRBV7-3A0A075B6L6 115 aa13.79□□□□□ -0.2
SF1-213ENST00000472725 NDUFA5Q16718 116 aa13.79□□□□□ -0.2
SF1-213ENST00000472725 ATP6V0E2Q8NHE4 81 aa13.79□□□□□ -0.2
SF1-213ENST00000472725 DNAJC30Q96LL9 226 aa13.79□□□□□ -0.2
SF1-213ENST00000472725 TMEM242Q9NWH2 141 aa13.79□□□□□ -0.2
SF1-213ENST00000472725 GAGE12JA6NER3 117 aa13.78□□□□□ -0.2
SF1-213ENST00000472725 M0QY20 66 aa13.78□□□□□ -0.2
SF1-213ENST00000472725 GAGE1Q13065 139 aa13.78□□□□□ -0.2
SF1-213ENST00000472725 GAGE4Q13068 117 aa13.78□□□□□ -0.2
SF1-213ENST00000472725 GAGE5Q13069 117 aa13.78□□□□□ -0.2
SF1-213ENST00000472725 GAGE13Q4V321 117 aa13.78□□□□□ -0.2
SF1-213ENST00000472725 ATP5L2Q7Z4Y8 100 aa13.78□□□□□ -0.2
SF1-213ENST00000472725 PLECQ15149 4684 aaKnown RBP13.77□□□□□ -0.21
SF1-213ENST00000472725 RHEBQ15382 184 aa13.77□□□□□ -0.21
SF1-213ENST00000472725 SUMO4Q6EEV6 95 aa13.77□□□□□ -0.21
SF1-213ENST00000472725 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.77□□□□□ -0.21
SF1-213ENST00000472725 GTSF1LQ9H1H1 148 aa13.77□□□□□ -0.21
SF1-213ENST00000472725 A0A087WWC5 75 aa13.76□□□□□ -0.21
SF1-213ENST00000472725 RASL11AQ6T310 242 aa13.76□□□□□ -0.21
SF1-213ENST00000472725 NEXN-AS1Q8NBZ9 246 aa13.76□□□□□ -0.21
SF1-213ENST00000472725 ZNRF2Q8NHG8 242 aa13.76□□□□□ -0.21
SF1-213ENST00000472725 UBE2D3P61077 147 aa13.75□□□□□ -0.21
SF1-213ENST00000472725 UBE2D2P62837 147 aa13.75□□□□□ -0.21
SF1-213ENST00000472725 SVBPQ8N300 66 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms