RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 PRSS29PA6NIE9 313 aa8.18□□□□□ -1.1
CLRN1-205ENST00000472224 RTL8CO15255 209 aa8.18□□□□□ -1.1
CLRN1-205ENST00000472224 SSTP61278 116 aa8.18□□□□□ -1.1
CLRN1-205ENST00000472224 RHOHQ15669 191 aa8.18□□□□□ -1.1
CLRN1-205ENST00000472224 NEGR1Q7Z3B1 354 aa8.18□□□□□ -1.1
CLRN1-205ENST00000472224 SLC25A29Q8N8R3 303 aa8.18□□□□□ -1.1
CLRN1-205ENST00000472224 EIF5A2Q9GZV4 153 aaKnown RBP8.18□□□□□ -1.1
CLRN1-205ENST00000472224 LRP1BQ9NZR2 4599 aa8.18□□□□□ -1.1
CLRN1-205ENST00000472224 TRBV20OR9-2A0A075B6H5 130 aa8.17□□□□□ -1.1
CLRN1-205ENST00000472224 NBDYA0A0U1RRE5 68 aa8.17□□□□□ -1.1
CLRN1-205ENST00000472224 CIDEAO60543 219 aa8.17□□□□□ -1.1
CLRN1-205ENST00000472224 NXPH4O95158 308 aa8.17□□□□□ -1.1
CLRN1-205ENST00000472224 IGLV2-8P01709 118 aa8.17□□□□□ -1.1
CLRN1-205ENST00000472224 GZMBP10144 247 aa8.17□□□□□ -1.1
CLRN1-205ENST00000472224 Q6ZR54 194 aa8.17□□□□□ -1.1
CLRN1-205ENST00000472224 OR2D3Q8NGH3 330 aa8.17□□□□□ -1.1
CLRN1-205ENST00000472224 SAMD10Q9BYL1 202 aa8.17□□□□□ -1.1
CLRN1-205ENST00000472224 Q9H8V8 135 aa8.17□□□□□ -1.1
CLRN1-205ENST00000472224 RHODO00212 210 aa8.16□□□□□ -1.1
CLRN1-205ENST00000472224 P01737 135 aa8.16□□□□□ -1.1
CLRN1-205ENST00000472224 CXCL1P09341 107 aa8.16□□□□□ -1.1
CLRN1-205ENST00000472224 SOHLH1Q5JUK2 328 aa8.16□□□□□ -1.1
CLRN1-205ENST00000472224 PIK3CD-AS1Q5SR53 167 aa8.16□□□□□ -1.1
CLRN1-205ENST00000472224 SPANXN1Q5VSR9 72 aa8.16□□□□□ -1.1
CLRN1-205ENST00000472224 LYPD5Q6UWN5 251 aa8.16□□□□□ -1.1
CLRN1-205ENST00000472224 OR10AG1Q8NH19 301 aa8.16□□□□□ -1.1
CLRN1-205ENST00000472224 LYPD6BQ8NI32 183 aa8.16□□□□□ -1.1
CLRN1-205ENST00000472224 SMIM12Q96EX1 92 aa8.16□□□□□ -1.1
CLRN1-205ENST00000472224 UPK3BQ9BT76 320 aa8.16□□□□□ -1.1
CLRN1-205ENST00000472224 SCRT2Q9NQ03 307 aa8.16□□□□□ -1.1
CLRN1-205ENST00000472224 BIN3Q9NQY0 253 aa8.16□□□□□ -1.1
CLRN1-205ENST00000472224 TRBV6-4A0A1B0GX49 114 aa8.15□□□□□ -1.1
CLRN1-205ENST00000472224 TTC32Q5I0X7 151 aa8.15□□□□□ -1.1
CLRN1-205ENST00000472224 C1orf134Q5TEV5 83 aa8.15□□□□□ -1.1
CLRN1-205ENST00000472224 ZFP2Q6ZN57 461 aa8.15□□□□□ -1.1
CLRN1-205ENST00000472224 Q6ZSN1 163 aa8.15□□□□□ -1.1
CLRN1-205ENST00000472224 XKRY2A2RUG3 117 aa8.14□□□□□ -1.11
CLRN1-205ENST00000472224 C19orf71A6NCJ1 209 aa8.14□□□□□ -1.11
CLRN1-205ENST00000472224 GAGE12JA6NER3 117 aa8.14□□□□□ -1.11
CLRN1-205ENST00000472224 TMEM250H0YL14 139 aa8.14□□□□□ -1.11
CLRN1-205ENST00000472224 SIVA1O15304 175 aa8.14□□□□□ -1.11
CLRN1-205ENST00000472224 RPS20P60866 119 aaKnown RBP8.14□□□□□ -1.11
CLRN1-205ENST00000472224 GAGE1Q13065 139 aa8.14□□□□□ -1.11
CLRN1-205ENST00000472224 GAGE4Q13068 117 aa8.14□□□□□ -1.11
CLRN1-205ENST00000472224 GAGE5Q13069 117 aa8.14□□□□□ -1.11
CLRN1-205ENST00000472224 ZNF56Q15929 161 aa8.14□□□□□ -1.11
CLRN1-205ENST00000472224 GAGE13Q4V321 117 aa8.14□□□□□ -1.11
CLRN1-205ENST00000472224 TEX261Q6UWH6 196 aa8.14□□□□□ -1.11
CLRN1-205ENST00000472224 SH2D6Q7Z4S9 175 aa8.14□□□□□ -1.11
CLRN1-205ENST00000472224 C14orf178Q8N769 122 aaPredicted RBP8.14□□□□□ -1.11
CLRN1-205ENST00000472224 MAPKAPK5-AS1Q8N8E1 139 aa8.14□□□□□ -1.11
CLRN1-205ENST00000472224 FER1L6-AS1Q8NA97 138 aa8.14□□□□□ -1.11
CLRN1-205ENST00000472224 SFRP2Q96HF1 295 aa8.14□□□□□ -1.11
CLRN1-205ENST00000472224 FAM210AQ96ND0 272 aa8.14□□□□□ -1.11
CLRN1-205ENST00000472224 K7EN84 100 aa8.13□□□□□ -1.11
CLRN1-205ENST00000472224 SNAI2O43623 268 aa8.13□□□□□ -1.11
CLRN1-205ENST00000472224 OR5AL1P0C617 328 aa8.13□□□□□ -1.11
CLRN1-205ENST00000472224 UFSP1Q6NVU6 142 aa8.13□□□□□ -1.11
CLRN1-205ENST00000472224 WFDC10BQ8IUB3 73 aa8.13□□□□□ -1.11
CLRN1-205ENST00000472224 C6orf223Q8N319 242 aa8.13□□□□□ -1.11
CLRN1-205ENST00000472224 SMIM7Q9BQ49 75 aa8.13□□□□□ -1.11
CLRN1-205ENST00000472224 KRTAP1-5Q9BYS1 174 aa8.13□□□□□ -1.11
CLRN1-205ENST00000472224 RNASE7Q9H1E1 156 aaKnown RBP8.13□□□□□ -1.11
CLRN1-205ENST00000472224 CRYGDP07320 174 aa8.12□□□□□ -1.11
CLRN1-205ENST00000472224 ATP6V0E2Q8NHE4 81 aa8.12□□□□□ -1.11
CLRN1-205ENST00000472224 OCC1Q8TAD7 63 aa8.12□□□□□ -1.11
CLRN1-205ENST00000472224 AP1S3Q96PC3 154 aa8.12□□□□□ -1.11
CLRN1-205ENST00000472224 MGPP08493 103 aa8.11□□□□□ -1.11
CLRN1-205ENST00000472224 SRP19P09132 144 aaKnown RBP8.11□□□□□ -1.11
CLRN1-205ENST00000472224 SMIM17P0DL12 118 aa8.11□□□□□ -1.11
CLRN1-205ENST00000472224 OR10J3Q5JRS4 329 aa8.11□□□□□ -1.11
CLRN1-205ENST00000472224 NUDT10Q8NFP7 164 aa8.11□□□□□ -1.11
CLRN1-205ENST00000472224 NUDT11Q96G61 164 aa8.11□□□□□ -1.11
CLRN1-205ENST00000472224 RPP21Q9H633 154 aaKnown RBP8.11□□□□□ -1.11
CLRN1-205ENST00000472224 A0A1W2PPQ1 181 aa8.1□□□□□ -1.11
CLRN1-205ENST00000472224 ZNF727A8MUV8 499 aa8.1□□□□□ -1.11
CLRN1-205ENST00000472224 F5H697 171 aa8.1□□□□□ -1.11
CLRN1-205ENST00000472224 CDK2AP2O75956 126 aa8.1□□□□□ -1.11
CLRN1-205ENST00000472224 IGLC6P0CF74 106 aa8.1□□□□□ -1.11
CLRN1-205ENST00000472224 Q9UF83 564 aa8.1□□□□□ -1.11
CLRN1-205ENST00000472224 LY96Q9Y6Y9 160 aa8.1□□□□□ -1.11
CLRN1-205ENST00000472224 TRAV8-6A0A0B4J262 113 aa8.09□□□□□ -1.11
CLRN1-205ENST00000472224 GATCO43716 136 aaKnown RBP8.09□□□□□ -1.11
CLRN1-205ENST00000472224 LINC00315P59091 139 aa8.09□□□□□ -1.11
CLRN1-205ENST00000472224 CACNG7P62955 275 aa8.09□□□□□ -1.11
CLRN1-205ENST00000472224 LYZL1Q6UWQ5 148 aa8.09□□□□□ -1.11
CLRN1-205ENST00000472224 GTSF1LQ9H1H1 148 aa8.09□□□□□ -1.11
CLRN1-205ENST00000472224 DMBT1Q9UGM3 2413 aaPredicted RBP8.08□□□□□ -1.12
CLRN1-205ENST00000472224 LINC00694P0DN24 101 aa8.08□□□□□ -1.12
CLRN1-205ENST00000472224 EVI2AP22794 236 aa8.08□□□□□ -1.12
CLRN1-205ENST00000472224 TIRAPP58753 221 aa8.08□□□□□ -1.12
CLRN1-205ENST00000472224 ERVFC1-1P60608 527 aa8.08□□□□□ -1.12
CLRN1-205ENST00000472224 RAB4BP61018 213 aa8.08□□□□□ -1.12
CLRN1-205ENST00000472224 RPL36AP83881 106 aaKnown RBP8.08□□□□□ -1.12
CLRN1-205ENST00000472224 PEA15Q15121 130 aa8.08□□□□□ -1.12
CLRN1-205ENST00000472224 LELP1Q5T871 98 aa8.08□□□□□ -1.12
CLRN1-205ENST00000472224 Q8N1X5 172 aa8.08□□□□□ -1.12
CLRN1-205ENST00000472224 RPL36ALQ969Q0 106 aaKnown RBP8.08□□□□□ -1.12
CLRN1-205ENST00000472224 MSRB1Q9NZV6 116 aa8.08□□□□□ -1.12
CLRN1-205ENST00000472224 TRAV9-2A0A087WT02 112 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms