RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 KRTAP10-1P60331 282 aa12.63□□□□□ -0.39
COMMD1-207ENST00000471704 EIF5AP63241 154 aaKnown RBP12.63□□□□□ -0.39
COMMD1-207ENST00000471704 Q8N3U1 123 aa12.63□□□□□ -0.39
COMMD1-207ENST00000471704 SFRP2Q96HF1 295 aa12.63□□□□□ -0.39
COMMD1-207ENST00000471704 TRAV8-6A0A0B4J262 113 aa12.62□□□□□ -0.39
COMMD1-207ENST00000471704 M0R381 172 aa12.62□□□□□ -0.39
COMMD1-207ENST00000471704 TCTE3Q8IZS6 198 aa12.62□□□□□ -0.39
COMMD1-207ENST00000471704 C10orf126Q8N4M7 172 aa12.62□□□□□ -0.39
COMMD1-207ENST00000471704 SYT8Q8NBV8 401 aa12.62□□□□□ -0.39
COMMD1-207ENST00000471704 A0A087WWL8 130 aa12.61□□□□□ -0.39
COMMD1-207ENST00000471704 IBA57-AS1B1ANH7 110 aa12.61□□□□□ -0.39
COMMD1-207ENST00000471704 IGHV3-30P01768 117 aa12.61□□□□□ -0.39
COMMD1-207ENST00000471704 IGHV3-33P01772 117 aa12.61□□□□□ -0.39
COMMD1-207ENST00000471704 S100A9P06702 114 aaKnown RBP12.61□□□□□ -0.39
COMMD1-207ENST00000471704 IGHV3-30-3P0DP02 117 aa12.61□□□□□ -0.39
COMMD1-207ENST00000471704 IGHV3-30-5P0DP03 117 aa12.61□□□□□ -0.39
COMMD1-207ENST00000471704 FAM74A4Q5TZK3 123 aa12.61□□□□□ -0.39
COMMD1-207ENST00000471704 DERL1Q9BUN8 251 aa12.61□□□□□ -0.39
COMMD1-207ENST00000471704 PHLDA3Q9Y5J5 127 aa12.61□□□□□ -0.39
COMMD1-207ENST00000471704 BAGE2Q86Y30 109 aa12.6□□□□□ -0.39
COMMD1-207ENST00000471704 TRAV1-1A0A0B4J248 108 aa12.59□□□□□ -0.39
COMMD1-207ENST00000471704 EPM2AB3EWF7 344 aa12.59□□□□□ -0.39
COMMD1-207ENST00000471704 RHODO00212 210 aa12.59□□□□□ -0.39
COMMD1-207ENST00000471704 C11orf52Q96A22 123 aa12.59□□□□□ -0.39
COMMD1-207ENST00000471704 GNG13Q9P2W3 67 aa12.59□□□□□ -0.39
COMMD1-207ENST00000471704 LRCOL1A6NCL2 159 aa12.58□□□□□ -0.4
COMMD1-207ENST00000471704 CXCL1P09341 107 aa12.58□□□□□ -0.4
COMMD1-207ENST00000471704 RPL35P42766 123 aaKnown RBP12.58□□□□□ -0.4
COMMD1-207ENST00000471704 SULT1A2P50226 295 aa12.58□□□□□ -0.4
COMMD1-207ENST00000471704 Q6ZNX1 250 aa12.58□□□□□ -0.4
COMMD1-207ENST00000471704 ZFP82Q8N141 532 aa12.58□□□□□ -0.4
COMMD1-207ENST00000471704 OR10AG1Q8NH19 301 aa12.58□□□□□ -0.4
COMMD1-207ENST00000471704 MANBALQ9NQG1 85 aa12.58□□□□□ -0.4
COMMD1-207ENST00000471704 IGLV2-8P01709 118 aa12.57□□□□□ -0.4
COMMD1-207ENST00000471704 PRR27Q6MZM9 219 aa12.57□□□□□ -0.4
COMMD1-207ENST00000471704 Q9HAA7 133 aa12.57□□□□□ -0.4
COMMD1-207ENST00000471704 BOLA1Q9Y3E2 137 aa12.57□□□□□ -0.4
COMMD1-207ENST00000471704 HERC1Q15751 4861 aa12.57□□□□□ -0.4
COMMD1-207ENST00000471704 SNAI2O43623 268 aa12.56□□□□□ -0.4
COMMD1-207ENST00000471704 C1QBP02746 253 aa12.56□□□□□ -0.4
COMMD1-207ENST00000471704 RAB5CP51148 216 aa12.56□□□□□ -0.4
COMMD1-207ENST00000471704 SSBP4Q9BWG4 385 aaPredicted RBP12.56□□□□□ -0.4
COMMD1-207ENST00000471704 SRRM2Q9UQ35 2752 aaKnown RBP12.56□□□□□ -0.4
COMMD1-207ENST00000471704 VPS13BQ7Z7G8 4022 aa12.55□□□□□ -0.4
COMMD1-207ENST00000471704 GCSHP23434 173 aa12.55□□□□□ -0.4
COMMD1-207ENST00000471704 MUC21A0A0G2JKD1 596 aa12.54□□□□□ -0.4
COMMD1-207ENST00000471704 MUC21A0A140T8X8 626 aa12.54□□□□□ -0.4
COMMD1-207ENST00000471704 CENPWQ5EE01 88 aa12.54□□□□□ -0.4
COMMD1-207ENST00000471704 DAZ4Q86SG3 579 aaKnown RBP12.54□□□□□ -0.4
COMMD1-207ENST00000471704 DAZ3Q9NR90 486 aaKnown RBP12.54□□□□□ -0.4
COMMD1-207ENST00000471704 OR5AL1P0C617 328 aa12.53□□□□□ -0.4
COMMD1-207ENST00000471704 LAGE3Q14657 143 aa12.53□□□□□ -0.4
COMMD1-207ENST00000471704 SLC51BQ86UW2 128 aa12.53□□□□□ -0.4
COMMD1-207ENST00000471704 DMBT1Q9UGM3 2413 aaPredicted RBP12.52□□□□□ -0.4
COMMD1-207ENST00000471704 RAB19A4D1S5 217 aa12.52□□□□□ -0.41
COMMD1-207ENST00000471704 PSCAO43653 123 aa12.52□□□□□ -0.41
COMMD1-207ENST00000471704 UBE2D3P61077 147 aa12.52□□□□□ -0.41
COMMD1-207ENST00000471704 UBE2D2P62837 147 aa12.52□□□□□ -0.41
COMMD1-207ENST00000471704 EIF5AL1Q6IS14 154 aaKnown RBP12.52□□□□□ -0.41
COMMD1-207ENST00000471704 NTN5Q8WTR8 489 aaPredicted RBP12.52□□□□□ -0.41
COMMD1-207ENST00000471704 TRBV20OR9-2A0A075B6H5 130 aa12.51□□□□□ -0.41
COMMD1-207ENST00000471704 A0A087WWC5 75 aa12.51□□□□□ -0.41
COMMD1-207ENST00000471704 TRBV10-1A0A0K0K1A3 114 aa12.51□□□□□ -0.41
COMMD1-207ENST00000471704 C19orf71A6NCJ1 209 aa12.51□□□□□ -0.41
COMMD1-207ENST00000471704 INAFM2P0DMQ5 153 aa12.51□□□□□ -0.41
COMMD1-207ENST00000471704 MEF2BQ02080 365 aaPredicted RBP12.51□□□□□ -0.41
COMMD1-207ENST00000471704 Q5VSD8 79 aa12.51□□□□□ -0.41
COMMD1-207ENST00000471704 C9orf62Q8N4C0 152 aa12.51□□□□□ -0.41
COMMD1-207ENST00000471704 DNAJC30Q96LL9 226 aa12.51□□□□□ -0.41
COMMD1-207ENST00000471704 KIF25-AS1Q9Y6Z4 181 aa12.51□□□□□ -0.41
COMMD1-207ENST00000471704 GZMBP10144 247 aa12.5□□□□□ -0.41
COMMD1-207ENST00000471704 RAB4BP61018 213 aa12.5□□□□□ -0.41
COMMD1-207ENST00000471704 WFDC2Q14508 124 aa12.5□□□□□ -0.41
COMMD1-207ENST00000471704 NIT1Q86X76 327 aa12.5□□□□□ -0.41
COMMD1-207ENST00000471704 NEXN-AS1Q8NBZ9 246 aa12.5□□□□□ -0.41
COMMD1-207ENST00000471704 OR10G8Q8NGN5 311 aa12.5□□□□□ -0.41
COMMD1-207ENST00000471704 hCG_2014768A0A024R1R8 64 aa12.49□□□□□ -0.41
COMMD1-207ENST00000471704 TRBV7-3A0A075B6L6 115 aa12.49□□□□□ -0.41
COMMD1-207ENST00000471704 IGLV5-52A0A0A0MRZ9 124 aa12.49□□□□□ -0.41
COMMD1-207ENST00000471704 IGLC6P0CF74 106 aa12.49□□□□□ -0.41
COMMD1-207ENST00000471704 SSTP61278 116 aa12.49□□□□□ -0.41
COMMD1-207ENST00000471704 ZNF56Q15929 161 aa12.49□□□□□ -0.41
COMMD1-207ENST00000471704 Q8N814 137 aa12.49□□□□□ -0.41
COMMD1-207ENST00000471704 FRZBQ92765 325 aa12.49□□□□□ -0.41
COMMD1-207ENST00000471704 MYCBP2O75592 4640 aa12.48□□□□□ -0.41
COMMD1-207ENST00000471704 FLG2Q5D862 2391 aaPredicted RBP12.48□□□□□ -0.41
COMMD1-207ENST00000471704 RBFOX3A6NFN3 312 aa12.48□□□□□ -0.41
COMMD1-207ENST00000471704 TEX46H3BTG2 121 aa12.48□□□□□ -0.41
COMMD1-207ENST00000471704 BCL2P10415 239 aa12.48□□□□□ -0.41
COMMD1-207ENST00000471704 RPL36AP83881 106 aaKnown RBP12.48□□□□□ -0.41
COMMD1-207ENST00000471704 SPANXN1Q5VSR9 72 aa12.48□□□□□ -0.41
COMMD1-207ENST00000471704 RPL36ALQ969Q0 106 aaKnown RBP12.48□□□□□ -0.41
COMMD1-207ENST00000471704 TMEM70Q9BUB7 260 aa12.48□□□□□ -0.41
COMMD1-207ENST00000471704 PDE6DO43924 150 aa12.47□□□□□ -0.41
COMMD1-207ENST00000471704 AKAP14Q86UN6 197 aa12.47□□□□□ -0.41
COMMD1-207ENST00000471704 IFNA1P01562 189 aa12.46□□□□□ -0.41
COMMD1-207ENST00000471704 SMR3BP02814 79 aaPredicted RBP12.46□□□□□ -0.41
COMMD1-207ENST00000471704 GNG4P50150 75 aa12.46□□□□□ -0.41
COMMD1-207ENST00000471704 SMIM12Q96EX1 92 aa12.46□□□□□ -0.41
COMMD1-207ENST00000471704 MED9Q9NWA0 146 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms