RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 GSKIPQ9P0R6 139 aa0.14□□□□□ -2.39
COPS3-206ENST00000471414 MED13LQ71F56 2210 aa0.14□□□□□ -2.39
COPS3-206ENST00000471414 MUC22E2RYF6 1773 aaPredicted RBP0.14□□□□□ -2.39
COPS3-206ENST00000471414 SOGA1O94964 1423 aa0.13□□□□□ -2.39
COPS3-206ENST00000471414 AKAP11Q9UKA4 1901 aa0.13□□□□□ -2.39
COPS3-206ENST00000471414 A0A087WTM6 91 aa0.13□□□□□ -2.39
COPS3-206ENST00000471414 FAM236AA0A1B0GUQ0 79 aa0.13□□□□□ -2.39
COPS3-206ENST00000471414 FAM236BA0A1B0GV22 79 aa0.13□□□□□ -2.39
COPS3-206ENST00000471414 TSPAN19P0C672 248 aa0.13□□□□□ -2.39
COPS3-206ENST00000471414 COX4I1P13073 169 aa0.13□□□□□ -2.39
COPS3-206ENST00000471414 SSBP1Q04837 148 aaKnown RBP0.13□□□□□ -2.39
COPS3-206ENST00000471414 LINC01545Q5VT33 79 aa0.13□□□□□ -2.39
COPS3-206ENST00000471414 VSTM2AQ8TAG5 236 aa0.13□□□□□ -2.39
COPS3-206ENST00000471414 LZICQ8WZA0 190 aa0.13□□□□□ -2.39
COPS3-206ENST00000471414 SMIM3Q9BZL3 60 aa0.13□□□□□ -2.39
COPS3-206ENST00000471414 PRG4Q92954 1404 aaPredicted RBP0.13□□□□□ -2.39
COPS3-206ENST00000471414 ADGRB1O14514 1584 aa0.12□□□□□ -2.39
COPS3-206ENST00000471414 UNC13BO14795 1591 aa0.12□□□□□ -2.39
COPS3-206ENST00000471414 GVQW2A0A096LPI5 108 aaPredicted RBP0.12□□□□□ -2.39
COPS3-206ENST00000471414 TRAV12-3A0A0B4J271 114 aa0.12□□□□□ -2.39
COPS3-206ENST00000471414 J3QR89 54 aa0.12□□□□□ -2.39
COPS3-206ENST00000471414 NCR2O95944 276 aa0.12□□□□□ -2.39
COPS3-206ENST00000471414 SPCS2Q15005 226 aa0.12□□□□□ -2.39
COPS3-206ENST00000471414 FAM74A4Q5TZK3 123 aa0.12□□□□□ -2.39
COPS3-206ENST00000471414 MIC13Q5XKP0 118 aa0.12□□□□□ -2.39
COPS3-206ENST00000471414 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.12□□□□□ -2.39
COPS3-206ENST00000471414 CTAGE3PQ8IX95 158 aa0.12□□□□□ -2.39
COPS3-206ENST00000471414 C4orf33Q8N1A6 199 aa0.12□□□□□ -2.39
COPS3-206ENST00000471414 C20orf197Q8N268 126 aa0.12□□□□□ -2.39
COPS3-206ENST00000471414 SMIM11BQ8TCY0 68 aa0.12□□□□□ -2.39
COPS3-206ENST00000471414 NDUFA12Q9UI09 145 aa0.12□□□□□ -2.39
COPS3-206ENST00000471414 ARFGEF1Q9Y6D6 1849 aa0.11□□□□□ -2.39
COPS3-206ENST00000471414 BDP1A6H8Y1 2624 aa0.11□□□□□ -2.39
COPS3-206ENST00000471414 M0R129 80 aa0.11□□□□□ -2.39
COPS3-206ENST00000471414 M0R2Z0 102 aa0.11□□□□□ -2.39
COPS3-206ENST00000471414 LINC00694P0DN24 101 aa0.11□□□□□ -2.39
COPS3-206ENST00000471414 ALX1Q15699 326 aa0.11□□□□□ -2.39
COPS3-206ENST00000471414 SPANXN1Q5VSR9 72 aa0.11□□□□□ -2.39
COPS3-206ENST00000471414 SLC48A1Q6P1K1 146 aa0.11□□□□□ -2.39
COPS3-206ENST00000471414 COX7B2Q8TF08 81 aa0.11□□□□□ -2.39
COPS3-206ENST00000471414 V9GYV3 84 aa0.11□□□□□ -2.39
COPS3-206ENST00000471414 F5P12259 2224 aa0.11□□□□□ -2.39
COPS3-206ENST00000471414 FHAD1B1AJZ9 1412 aa0.11□□□□□ -2.39
COPS3-206ENST00000471414 SSC5DA1L4H1 1573 aa0.11□□□□□ -2.39
COPS3-206ENST00000471414 SIPA1L3O60292 1781 aaPredicted RBP0.1□□□□□ -2.39
COPS3-206ENST00000471414 TRBV7-1A0A0A6YYK4 115 aa0.1□□□□□ -2.39
COPS3-206ENST00000471414 APODP05090 189 aa0.1□□□□□ -2.39
COPS3-206ENST00000471414 PIRTP0C851 137 aa0.1□□□□□ -2.39
COPS3-206ENST00000471414 MAFIPQ8WZ33 124 aa0.1□□□□□ -2.39
COPS3-206ENST00000471414 Q96NJ1 140 aa0.1□□□□□ -2.39
COPS3-206ENST00000471414 TMEM242Q9NWH2 141 aa0.1□□□□□ -2.39
COPS3-206ENST00000471414 TTC28Q96AY4 2481 aa0.09□□□□□ -2.39
COPS3-206ENST00000471414 CACNA1HO95180 2353 aa0.09□□□□□ -2.39
COPS3-206ENST00000471414 TPRP12270 2363 aaKnown RBP0.09□□□□□ -2.39
COPS3-206ENST00000471414 JMJD1CQ15652 2540 aa0.09□□□□□ -2.39
COPS3-206ENST00000471414 LOC105371267A0A1B0GV96 52 aa0.09□□□□□ -2.4
COPS3-206ENST00000471414 K7ERU9 68 aa0.09□□□□□ -2.4
COPS3-206ENST00000471414 PITX3O75364 302 aa0.09□□□□□ -2.4
COPS3-206ENST00000471414 COX6A2Q02221 97 aa0.09□□□□□ -2.4
COPS3-206ENST00000471414 SMIM21Q3B7S5 101 aa0.09□□□□□ -2.4
COPS3-206ENST00000471414 C9orf116Q5BN46 136 aaPredicted RBP0.09□□□□□ -2.4
COPS3-206ENST00000471414 Q6ZUT4 128 aa0.09□□□□□ -2.4
COPS3-206ENST00000471414 COPZ2Q9P299 210 aa0.09□□□□□ -2.4
COPS3-206ENST00000471414 TMEM2Q9UHN6 1383 aa0.08□□□□□ -2.4
COPS3-206ENST00000471414 SPINK1P00995 79 aa0.08□□□□□ -2.4
COPS3-206ENST00000471414 NMBP08949 121 aa0.08□□□□□ -2.4
COPS3-206ENST00000471414 ACYP2P14621 99 aa0.08□□□□□ -2.4
COPS3-206ENST00000471414 Q5BKY6 102 aa0.08□□□□□ -2.4
COPS3-206ENST00000471414 SCIMPQ6UWF3 145 aa0.08□□□□□ -2.4
COPS3-206ENST00000471414 TSTD1Q8NFU3 115 aa0.08□□□□□ -2.4
COPS3-206ENST00000471414 ANP32BQ92688 251 aaKnown RBP0.08□□□□□ -2.4
COPS3-206ENST00000471414 PSMG3Q9BT73 122 aaPredicted RBP0.08□□□□□ -2.4
COPS3-206ENST00000471414 RPRMQ9NS64 109 aa0.08□□□□□ -2.4
COPS3-206ENST00000471414 KIAA0100Q14667 2235 aaKnown RBP0.07□□□□□ -2.4
COPS3-206ENST00000471414 DAPK1P53355 1430 aa0.07□□□□□ -2.4
COPS3-206ENST00000471414 NPFFO15130 113 aa0.07□□□□□ -2.4
COPS3-206ENST00000471414 RRAS2P62070 204 aaPredicted RBP0.07□□□□□ -2.4
COPS3-206ENST00000471414 RPL7L1Q6DKI1 246 aaKnown RBP0.07□□□□□ -2.4
COPS3-206ENST00000471414 C10orf82Q8WW14 230 aa0.07□□□□□ -2.4
COPS3-206ENST00000471414 SCP2D1Q9UJQ7 156 aa0.07□□□□□ -2.4
COPS3-206ENST00000471414 SPEF2Q9C093 1822 aa0.07□□□□□ -2.4
COPS3-206ENST00000471414 DOCK11Q5JSL3 2073 aa0.06□□□□□ -2.4
COPS3-206ENST00000471414 TRGV1A0A0A0MS02 117 aa0.06□□□□□ -2.4
COPS3-206ENST00000471414 A6NIN4 97 aa0.06□□□□□ -2.4
COPS3-206ENST00000471414 TMEM14DPA8MWL7 114 aa0.06□□□□□ -2.4
COPS3-206ENST00000471414 IFNA17P01571 189 aa0.06□□□□□ -2.4
COPS3-206ENST00000471414 IL5P05113 134 aa0.06□□□□□ -2.4
COPS3-206ENST00000471414 PIPP12273 146 aaPredicted RBP0.06□□□□□ -2.4
COPS3-206ENST00000471414 UBE2D1P51668 147 aa0.06□□□□□ -2.4
COPS3-206ENST00000471414 UBE2G1P62253 170 aa0.06□□□□□ -2.4
COPS3-206ENST00000471414 RPS25P62851 125 aaKnown RBP0.06□□□□□ -2.4
COPS3-206ENST00000471414 INSL4Q14641 139 aa0.06□□□□□ -2.4
COPS3-206ENST00000471414 Q6ZRX8 168 aa0.06□□□□□ -2.4
COPS3-206ENST00000471414 TPT1P8Q9HAU6 139 aa0.06□□□□□ -2.4
COPS3-206ENST00000471414 SSPOA2VEC9 5147 aa0.06□□□□□ -2.4
COPS3-206ENST00000471414 LRP1Q07954 4544 aaKnown RBP0.06□□□□□ -2.4
COPS3-206ENST00000471414 ANKRD17O75179 2603 aaKnown RBP0.06□□□□□ -2.4
COPS3-206ENST00000471414 IBTKQ9P2D0 1353 aaPredicted RBP0.06□□□□□ -2.4
COPS3-206ENST00000471414 MYO7AQ13402 2215 aa0.05□□□□□ -2.4
COPS3-206ENST00000471414 CLPSL1A2RUU4 121 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms