RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 MANBALQ9NQG1 85 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 ARL2-SNX15V9GYD0 113 aa3.21□□□□□ -1.9
CCDC39-202ENST00000471307 SORL1Q92673 2214 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 TRBV19A0A075B6N1 114 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 IGHV3-74A0A0B4J1X5 117 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 KIR2DL5BA0A0G2JN68 375 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 KIR2DL5BA0A0G2JPC4 375 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 A0A0J9YXY3 114 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 A0A1B0GV50 99 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 H3BQ15 152 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 OR10J4P0C629 311 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 IGLC2P0DOY2 106 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 PYYP10082 97 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 APOC4P55056 127 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 UBE2G2P60604 165 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 UBE2L3P68036 154 aaKnown RBP3.2□□□□□ -1.9
CCDC39-202ENST00000471307 PSG9Q00887 426 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 PEA15Q15121 130 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 MRPL52Q86TS9 123 aaKnown RBP3.2□□□□□ -1.9
CCDC39-202ENST00000471307 CBLN2Q8IUK8 224 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 KIR2DL5AQ8N109 375 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 WFDC9Q8NEX5 89 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 KIR2DL5BQ8NHK3 375 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 TCEAL7Q9BRU2 100 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 EIF5A2Q9GZV4 153 aaKnown RBP3.2□□□□□ -1.9
CCDC39-202ENST00000471307 ZNF586Q9NXT0 402 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 GNG13Q9P2W3 67 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 VAX2Q9UIW0 290 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 VWFP04275 2813 aa3.2□□□□□ -1.9
CCDC39-202ENST00000471307 IGHV3-49A0A0A0MS15 119 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 TRAV2A0A0B4J234 112 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 IGHV3-66A0A0C4DH42 116 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 PGPA6NDG6 321 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 C11orf94C9JXX5 98 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 F6UZH7 168 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 TMEM250H0YL14 139 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 PEX7O00628 323 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 ISLRO14498 428 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 TCAPO15273 167 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 PDE6DO43924 150 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 BCL2P10415 239 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 INSL3P51460 131 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 RANP62826 216 aaKnown RBP3.19□□□□□ -1.9
CCDC39-202ENST00000471307 MEF2BQ02080 365 aaPredicted RBP3.19□□□□□ -1.9
CCDC39-202ENST00000471307 DEFB114Q30KQ6 69 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 ACTL10Q5JWF8 245 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 TCF24Q7RTU0 167 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 COMMD7Q86VX2 200 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 TMEM61Q8N0U2 210 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 OR2K2Q8NGT1 345 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 OR10J6PQ8NGY7 276 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 RXFP4Q8TDU9 374 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 BLNKQ8WV28 456 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 RPUSD4Q96CM3 377 aaKnown RBP3.19□□□□□ -1.9
CCDC39-202ENST00000471307 SLC50A1Q9BRV3 221 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 SLC35B3Q9H1N7 401 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 OTORQ9NRC9 128 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 PRELID1Q9Y255 219 aa3.19□□□□□ -1.9
CCDC39-202ENST00000471307 YTHDF2Q9Y5A9 579 aaKnown RBP3.19□□□□□ -1.9
CCDC39-202ENST00000471307 K7EN84 100 aa3.18□□□□□ -1.9
CCDC39-202ENST00000471307 DNASE2O00115 360 aaPredicted RBP3.18□□□□□ -1.9
CCDC39-202ENST00000471307 CRXO43186 299 aaPredicted RBP3.18□□□□□ -1.9
CCDC39-202ENST00000471307 CHTF8P0CG12 524 aa3.18□□□□□ -1.9
CCDC39-202ENST00000471307 CTRLP40313 264 aa3.18□□□□□ -1.9
CCDC39-202ENST00000471307 CSN1S1P47710 185 aa3.18□□□□□ -1.9
CCDC39-202ENST00000471307 CMC4P56277 68 aaPredicted RBP3.18□□□□□ -1.9
CCDC39-202ENST00000471307 HERVK_113P61574 105 aa3.18□□□□□ -1.9
CCDC39-202ENST00000471307 SNRPD3P62318 126 aaKnown RBP3.18□□□□□ -1.9
CCDC39-202ENST00000471307 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.18□□□□□ -1.9
CCDC39-202ENST00000471307 ZNF493Q6ZR52 646 aa3.18□□□□□ -1.9
CCDC39-202ENST00000471307 SLC7A5P1Q8MH63 180 aa3.18□□□□□ -1.9
CCDC39-202ENST00000471307 C5orf17Q8NAS9 161 aa3.18□□□□□ -1.9
CCDC39-202ENST00000471307 C20orf203Q8NBC4 194 aa3.18□□□□□ -1.9
CCDC39-202ENST00000471307 CMTM2Q8TAZ6 248 aa3.18□□□□□ -1.9
CCDC39-202ENST00000471307 DYNLRB2Q8TF09 96 aa3.18□□□□□ -1.9
CCDC39-202ENST00000471307 DCANP1Q8TF63 244 aa3.18□□□□□ -1.9
CCDC39-202ENST00000471307 HIST1H2BAQ96A08 127 aa3.18□□□□□ -1.9
CCDC39-202ENST00000471307 MS4A6AQ9H2W1 248 aa3.18□□□□□ -1.9
CCDC39-202ENST00000471307 EPDR1Q9UM22 224 aa3.18□□□□□ -1.9
CCDC39-202ENST00000471307 TRAV8-4A0A0B4J246 113 aa3.17□□□□□ -1.9
CCDC39-202ENST00000471307 TMEM218A2RU14 115 aa3.17□□□□□ -1.9
CCDC39-202ENST00000471307 RBAKDNA6NC62 111 aa3.17□□□□□ -1.9
CCDC39-202ENST00000471307 OR4C46A6NHA9 309 aa3.17□□□□□ -1.9
CCDC39-202ENST00000471307 GGTLC3B5MD39 225 aa3.17□□□□□ -1.9
CCDC39-202ENST00000471307 KRBOX1C9JBD0 128 aa3.17□□□□□ -1.9
CCDC39-202ENST00000471307 SLC17A3O00476 420 aa3.17□□□□□ -1.9
CCDC39-202ENST00000471307 ZNF324O75467 553 aaPredicted RBP3.17□□□□□ -1.9
CCDC39-202ENST00000471307 IGLV1-51P01701 117 aa3.17□□□□□ -1.9
CCDC39-202ENST00000471307 P01737 135 aa3.17□□□□□ -1.9
CCDC39-202ENST00000471307 SLC25A5P05141 298 aaKnown RBP3.17□□□□□ -1.9
CCDC39-202ENST00000471307 SRP19P09132 144 aaKnown RBP3.17□□□□□ -1.9
CCDC39-202ENST00000471307 ATP5G3P48201 142 aa3.17□□□□□ -1.9
CCDC39-202ENST00000471307 CASC10Q5T4H9 136 aa3.17□□□□□ -1.9
CCDC39-202ENST00000471307 EXOC3-AS1Q8N2X6 119 aa3.17□□□□□ -1.9
CCDC39-202ENST00000471307 KLF12Q9Y4X4 402 aa3.17□□□□□ -1.9
CCDC39-202ENST00000471307 PKD1L1Q8TDX9 2849 aa3.17□□□□□ -1.9
CCDC39-202ENST00000471307 IGKV3-7A0A075B6H7 116 aa3.16□□□□□ -1.9
CCDC39-202ENST00000471307 TRAV8-2A0A0B4J237 113 aa3.16□□□□□ -1.9
CCDC39-202ENST00000471307 IGHV3OR16-9A0A0B4J2B5 98 aa3.16□□□□□ -1.9
CCDC39-202ENST00000471307 TRBV6-1A0A0K0K1D8 114 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms