RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 GAGE12IP0CL82 117 aa7.02□□□□□ -1.29
CCM2-204ENST00000470837 SPART-AS1P0CW21 52 aa7.02□□□□□ -1.29
CCM2-204ENST00000470837 DEFB130BP0DP73 79 aa7.02□□□□□ -1.29
CCM2-204ENST00000470837 DEFB130AP0DP74 79 aa7.02□□□□□ -1.29
CCM2-204ENST00000470837 Q6ZTI0 123 aa7.02□□□□□ -1.29
CCM2-204ENST00000470837 SBSPONQ8IVN8 264 aa7.02□□□□□ -1.29
CCM2-204ENST00000470837 ORMDL3Q8N138 153 aa7.02□□□□□ -1.29
CCM2-204ENST00000470837 IL17DQ8TAD2 202 aa7.02□□□□□ -1.29
CCM2-204ENST00000470837 MRAP2Q96G30 205 aa7.02□□□□□ -1.29
CCM2-204ENST00000470837 TRAV4A0A0B4J268 109 aa7.01□□□□□ -1.29
CCM2-204ENST00000470837 DAD1P61803 113 aa7.01□□□□□ -1.29
CCM2-204ENST00000470837 SLAQ13239 276 aa7.01□□□□□ -1.29
CCM2-204ENST00000470837 KIAA1644Q3SXP7 199 aa7.01□□□□□ -1.29
CCM2-204ENST00000470837 FAM222AQ5U5X8 452 aa7.01□□□□□ -1.29
CCM2-204ENST00000470837 RETNQ9HD89 108 aa7.01□□□□□ -1.29
CCM2-204ENST00000470837 TMA7Q9Y2S6 64 aaKnown RBP7.01□□□□□ -1.29
CCM2-204ENST00000470837 NOTCH1P46531 2555 aa7□□□□□ -1.29
CCM2-204ENST00000470837 PLAC8L1A1L4L8 177 aa7□□□□□ -1.29
CCM2-204ENST00000470837 D6R8Y8 96 aa7□□□□□ -1.29
CCM2-204ENST00000470837 DEFB4AO15263 64 aa7□□□□□ -1.29
CCM2-204ENST00000470837 RS1O15537 224 aa7□□□□□ -1.29
CCM2-204ENST00000470837 S100A6P06703 90 aa7□□□□□ -1.29
CCM2-204ENST00000470837 RAB4AP20338 218 aa7□□□□□ -1.29
CCM2-204ENST00000470837 SRIP30626 198 aa7□□□□□ -1.29
CCM2-204ENST00000470837 DEFA6Q01524 100 aa7□□□□□ -1.29
CCM2-204ENST00000470837 MRPL51Q4U2R6 128 aaKnown RBP7□□□□□ -1.29
CCM2-204ENST00000470837 CFAP126Q5VTH2 177 aa7□□□□□ -1.29
CCM2-204ENST00000470837 ZFP2Q6ZN57 461 aa7□□□□□ -1.29
CCM2-204ENST00000470837 Q8NAQ8 132 aa7□□□□□ -1.29
CCM2-204ENST00000470837 PRELID3AQ96N28 172 aa7□□□□□ -1.29
CCM2-204ENST00000470837 JPT2Q9H910 190 aa7□□□□□ -1.29
CCM2-204ENST00000470837 IGHV3-73A0A0B4J1V6 119 aa6.99□□□□□ -1.29
CCM2-204ENST00000470837 TRGV4A0A0C4DH28 118 aa6.99□□□□□ -1.29
CCM2-204ENST00000470837 IGHV3-53P01767 116 aa6.99□□□□□ -1.29
CCM2-204ENST00000470837 CRYGDP07320 174 aa6.99□□□□□ -1.29
CCM2-204ENST00000470837 BAGE3Q86Y29 109 aa6.99□□□□□ -1.29
CCM2-204ENST00000470837 RNF185Q96GF1 192 aa6.99□□□□□ -1.29
CCM2-204ENST00000470837 B9D2Q9BPU9 175 aa6.99□□□□□ -1.29
CCM2-204ENST00000470837 TM2D3Q9BRN9 247 aa6.99□□□□□ -1.29
CCM2-204ENST00000470837 C11orf68Q9H3H3 251 aaKnown RBP6.99□□□□□ -1.29
CCM2-204ENST00000470837 DKK2Q9UBU2 259 aa6.99□□□□□ -1.29
CCM2-204ENST00000470837 LAMTOR2Q9Y2Q5 125 aa6.99□□□□□ -1.29
CCM2-204ENST00000470837 NCR2O95944 276 aa6.98□□□□□ -1.29
CCM2-204ENST00000470837 NHLRC4P0CG21 123 aaPredicted RBP6.98□□□□□ -1.29
CCM2-204ENST00000470837 ALKBH7Q9BT30 221 aaPredicted RBP6.98□□□□□ -1.29
CCM2-204ENST00000470837 SAMD10Q9BYL1 202 aa6.98□□□□□ -1.29
CCM2-204ENST00000470837 TRAV26-2A0A0B4J265 109 aa6.97□□□□□ -1.29
CCM2-204ENST00000470837 SMKR1H3BMG3 65 aa6.97□□□□□ -1.29
CCM2-204ENST00000470837 PHOX2AO14813 284 aa6.97□□□□□ -1.29
CCM2-204ENST00000470837 ATP5G1P05496 136 aa6.97□□□□□ -1.29
CCM2-204ENST00000470837 OR10J3Q5JRS4 329 aa6.97□□□□□ -1.29
CCM2-204ENST00000470837 SUMO4Q6EEV6 95 aa6.97□□□□□ -1.29
CCM2-204ENST00000470837 PRSS3P2Q8NHM4 247 aa6.97□□□□□ -1.29
CCM2-204ENST00000470837 C18orf15Q96N68 181 aa6.97□□□□□ -1.29
CCM2-204ENST00000470837 MAP1LC3AQ9H492 121 aa6.97□□□□□ -1.29
CCM2-204ENST00000470837 KIF25-AS1Q9Y6Z4 181 aa6.97□□□□□ -1.29
CCM2-204ENST00000470837 U3KQK5 164 aa6.97□□□□□ -1.29
CCM2-204ENST00000470837 NBEAL1Q6ZS30 2694 aa6.97□□□□□ -1.29
CCM2-204ENST00000470837 A0A0J9YWU9 116 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 HIST1H2BKO60814 126 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 TNFRSF6BO95407 300 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 HIST1H2BJP06899 126 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 PMCHP20382 165 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 HIST1H2BOP23527 126 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 HIST1H2BBP33778 126 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 NDUFA6P56556 154 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 HIST1H2BDP58876 126 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 HIST1H2BCP62807 126 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 HIST2H2BEQ16778 126 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.96□□□□□ -1.3
CCM2-204ENST00000470837 FA2HQ7L5A8 372 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 POM121L12Q8N7R1 296 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 C11orf45Q8TAV5 145 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 HIST1H2BHQ93079 126 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 ZNF479Q96JC4 524 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 HIST1H2BNQ99877 126 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 HIST1H2BMQ99879 126 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 PRADC1Q9BSG0 188 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 ST20Q9HBF5 79 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 TNFRSF18Q9Y5U5 241 aa6.96□□□□□ -1.3
CCM2-204ENST00000470837 LOC389332A0A1B0GUA5 103 aa6.95□□□□□ -1.3
CCM2-204ENST00000470837 K7EQD1 137 aa6.95□□□□□ -1.3
CCM2-204ENST00000470837 HTN3P15516 51 aa6.95□□□□□ -1.3
CCM2-204ENST00000470837 LINC00315P59091 139 aa6.95□□□□□ -1.3
CCM2-204ENST00000470837 RHOHQ15669 191 aa6.95□□□□□ -1.3
CCM2-204ENST00000470837 LINC00612Q8N6U2 182 aa6.95□□□□□ -1.3
CCM2-204ENST00000470837 C20orf78Q9BR46 151 aa6.95□□□□□ -1.3
CCM2-204ENST00000470837 NIT2Q9NQR4 276 aa6.95□□□□□ -1.3
CCM2-204ENST00000470837 TRBV10-1A0A0K0K1A3 114 aa6.94□□□□□ -1.3
CCM2-204ENST00000470837 TRBV6-4A0A1B0GX49 114 aa6.94□□□□□ -1.3
CCM2-204ENST00000470837 F5H768 121 aa6.94□□□□□ -1.3
CCM2-204ENST00000470837 M0QY20 66 aa6.94□□□□□ -1.3
CCM2-204ENST00000470837 NPYP01303 97 aa6.94□□□□□ -1.3
CCM2-204ENST00000470837 SUMO2P61956 95 aaKnown RBP6.94□□□□□ -1.3
CCM2-204ENST00000470837 RPL36AP83881 106 aaKnown RBP6.94□□□□□ -1.3
CCM2-204ENST00000470837 Q0VG73 95 aa6.94□□□□□ -1.3
CCM2-204ENST00000470837 UFSP1Q6NVU6 142 aa6.94□□□□□ -1.3
CCM2-204ENST00000470837 C18orf32Q8TCD1 76 aa6.94□□□□□ -1.3
CCM2-204ENST00000470837 RPL36ALQ969Q0 106 aaKnown RBP6.94□□□□□ -1.3
CCM2-204ENST00000470837 DNAJC30Q96LL9 226 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms