RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 RS1O15537 224 aa9.23□□□□□ -0.93
SEMA3F-208ENST00000470737 TAGLN2P37802 199 aaKnown RBP9.23□□□□□ -0.93
SEMA3F-208ENST00000470737 UBE2G1P62253 170 aa9.23□□□□□ -0.93
SEMA3F-208ENST00000470737 LINC00528Q8N1L1 170 aa9.23□□□□□ -0.93
SEMA3F-208ENST00000470737 ATP6V0E2Q8NHE4 81 aa9.23□□□□□ -0.93
SEMA3F-208ENST00000470737 DEFB104AQ8WTQ1 72 aa9.23□□□□□ -0.93
SEMA3F-208ENST00000470737 PTH2Q96A98 100 aa9.23□□□□□ -0.93
SEMA3F-208ENST00000470737 TRAV8-3A0A0A6YYJ7 113 aa9.22□□□□□ -0.93
SEMA3F-208ENST00000470737 CCL20P78556 96 aa9.22□□□□□ -0.93
SEMA3F-208ENST00000470737 TOR2AQ5JU69 321 aa9.22□□□□□ -0.93
SEMA3F-208ENST00000470737 PIK3CD-AS1Q5SR53 167 aa9.22□□□□□ -0.93
SEMA3F-208ENST00000470737 DNLZQ5SXM8 178 aa9.22□□□□□ -0.93
SEMA3F-208ENST00000470737 CFAP126Q5VTH2 177 aa9.22□□□□□ -0.93
SEMA3F-208ENST00000470737 C11orf52Q96A22 123 aa9.22□□□□□ -0.93
SEMA3F-208ENST00000470737 MLST8Q9BVC4 326 aa9.22□□□□□ -0.93
SEMA3F-208ENST00000470737 C11orf21Q9P2W6 132 aa9.22□□□□□ -0.93
SEMA3F-208ENST00000470737 KRTAP29-1A8MX34 341 aaPredicted RBP9.21□□□□□ -0.94
SEMA3F-208ENST00000470737 IFNA1P01562 189 aa9.21□□□□□ -0.94
SEMA3F-208ENST00000470737 MGST1P10620 155 aaKnown RBP9.21□□□□□ -0.94
SEMA3F-208ENST00000470737 AKR1C3P42330 323 aa9.21□□□□□ -0.94
SEMA3F-208ENST00000470737 BLOC1S1P78537 153 aa9.21□□□□□ -0.94
SEMA3F-208ENST00000470737 ZNF674Q2M3X9 581 aa9.21□□□□□ -0.94
SEMA3F-208ENST00000470737 LYPD6BQ8NI32 183 aa9.21□□□□□ -0.94
SEMA3F-208ENST00000470737 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.2□□□□□ -0.94
SEMA3F-208ENST00000470737 PDE6DO43924 150 aa9.2□□□□□ -0.94
SEMA3F-208ENST00000470737 C9orf85Q96MD7 179 aa9.2□□□□□ -0.94
SEMA3F-208ENST00000470737 GNG13Q9P2W3 67 aa9.2□□□□□ -0.94
SEMA3F-208ENST00000470737 COX11Q9Y6N1 276 aa9.2□□□□□ -0.94
SEMA3F-208ENST00000470737 A0A1B0GV50 99 aa9.19□□□□□ -0.94
SEMA3F-208ENST00000470737 SCO2A0A1W2PP80 73 aa9.19□□□□□ -0.94
SEMA3F-208ENST00000470737 LECT2O14960 151 aa9.19□□□□□ -0.94
SEMA3F-208ENST00000470737 CRIP1P50238 77 aa9.19□□□□□ -0.94
SEMA3F-208ENST00000470737 MEF2BQ02080 365 aaPredicted RBP9.19□□□□□ -0.94
SEMA3F-208ENST00000470737 ZNF506Q5JVG8 444 aa9.19□□□□□ -0.94
SEMA3F-208ENST00000470737 FAM162BQ5T6X4 162 aa9.19□□□□□ -0.94
SEMA3F-208ENST00000470737 Q6ZSA8 131 aa9.19□□□□□ -0.94
SEMA3F-208ENST00000470737 SYT8Q8NBV8 401 aa9.19□□□□□ -0.94
SEMA3F-208ENST00000470737 SMIM12Q96EX1 92 aa9.19□□□□□ -0.94
SEMA3F-208ENST00000470737 ZC2HC1AQ96GY0 325 aa9.19□□□□□ -0.94
SEMA3F-208ENST00000470737 IGKV3D-20A0A0C4DH25 116 aa9.18□□□□□ -0.94
SEMA3F-208ENST00000470737 NDUFS6O75380 124 aaKnown RBP9.18□□□□□ -0.94
SEMA3F-208ENST00000470737 RNASE3P12724 160 aaKnown RBP9.18□□□□□ -0.94
SEMA3F-208ENST00000470737 WFDC2Q14508 124 aa9.18□□□□□ -0.94
SEMA3F-208ENST00000470737 LINC01559Q495D7 138 aa9.18□□□□□ -0.94
SEMA3F-208ENST00000470737 RMI2Q96E14 147 aa9.18□□□□□ -0.94
SEMA3F-208ENST00000470737 GAGE12JA6NER3 117 aa9.17□□□□□ -0.94
SEMA3F-208ENST00000470737 PGPEP1LA6NFU8 196 aa9.17□□□□□ -0.94
SEMA3F-208ENST00000470737 KRBOX1C9JBD0 128 aa9.17□□□□□ -0.94
SEMA3F-208ENST00000470737 CXCL1P09341 107 aa9.17□□□□□ -0.94
SEMA3F-208ENST00000470737 BCL2P10415 239 aa9.17□□□□□ -0.94
SEMA3F-208ENST00000470737 GAGE1Q13065 139 aa9.17□□□□□ -0.94
SEMA3F-208ENST00000470737 GAGE4Q13068 117 aa9.17□□□□□ -0.94
SEMA3F-208ENST00000470737 GAGE5Q13069 117 aa9.17□□□□□ -0.94
SEMA3F-208ENST00000470737 GAGE13Q4V321 117 aa9.17□□□□□ -0.94
SEMA3F-208ENST00000470737 SERTAD4-AS1Q5TG53 156 aa9.17□□□□□ -0.94
SEMA3F-208ENST00000470737 ALKAL2Q6UX46 152 aa9.17□□□□□ -0.94
SEMA3F-208ENST00000470737 BAGE2Q86Y30 109 aa9.17□□□□□ -0.94
SEMA3F-208ENST00000470737 IL36BQ9NZH7 164 aa9.17□□□□□ -0.94
SEMA3F-208ENST00000470737 VAX2Q9UIW0 290 aa9.17□□□□□ -0.94
SEMA3F-208ENST00000470737 URGCP-MRPS24S4R325 110 aa9.17□□□□□ -0.94
SEMA3F-208ENST00000470737 A0A087WWC5 75 aa9.16□□□□□ -0.94
SEMA3F-208ENST00000470737 RBFOX3A6NFN3 312 aa9.16□□□□□ -0.94
SEMA3F-208ENST00000470737 A8MWV9 139 aa9.16□□□□□ -0.94
SEMA3F-208ENST00000470737 B4DEV8 164 aa9.16□□□□□ -0.94
SEMA3F-208ENST00000470737 SH2D1AO60880 128 aa9.16□□□□□ -0.94
SEMA3F-208ENST00000470737 S100A4P26447 101 aaKnown RBP9.16□□□□□ -0.94
SEMA3F-208ENST00000470737 RPL35P42766 123 aaKnown RBP9.16□□□□□ -0.94
SEMA3F-208ENST00000470737 NKX2-5P52952 324 aaPredicted RBP9.16□□□□□ -0.94
SEMA3F-208ENST00000470737 ZFP2Q6ZN57 461 aa9.16□□□□□ -0.94
SEMA3F-208ENST00000470737 DAZ4Q86SG3 579 aaKnown RBP9.16□□□□□ -0.94
SEMA3F-208ENST00000470737 Q8N3U1 123 aa9.16□□□□□ -0.94
SEMA3F-208ENST00000470737 BAALCQ8WXS3 180 aa9.16□□□□□ -0.94
SEMA3F-208ENST00000470737 DAZ3Q9NR90 486 aaKnown RBP9.16□□□□□ -0.94
SEMA3F-208ENST00000470737 ASIPP42127 132 aa9.15□□□□□ -0.94
SEMA3F-208ENST00000470737 SCXQ7RTU7 201 aa9.15□□□□□ -0.94
SEMA3F-208ENST00000470737 Q8N976 141 aa9.15□□□□□ -0.94
SEMA3F-208ENST00000470737 PARLQ9H300 379 aa9.15□□□□□ -0.94
SEMA3F-208ENST00000470737 IGKV2D-24A0A075B6R9 120 aa9.14□□□□□ -0.95
SEMA3F-208ENST00000470737 TMEM250H0YL14 139 aa9.13□□□□□ -0.95
SEMA3F-208ENST00000470737 IGLV2-8P01709 118 aa9.13□□□□□ -0.95
SEMA3F-208ENST00000470737 LINC01620Q4KN68 170 aa9.13□□□□□ -0.95
SEMA3F-208ENST00000470737 KCNIP4Q6PIL6 250 aa9.13□□□□□ -0.95
SEMA3F-208ENST00000470737 DERL1Q9BUN8 251 aa9.13□□□□□ -0.95
SEMA3F-208ENST00000470737 LINC00694P0DN24 101 aa9.12□□□□□ -0.95
SEMA3F-208ENST00000470737 CHAC1Q9BUX1 264 aa9.12□□□□□ -0.95
SEMA3F-208ENST00000470737 BIN3Q9NQY0 253 aa9.12□□□□□ -0.95
SEMA3F-208ENST00000470737 MED9Q9NWA0 146 aa9.12□□□□□ -0.95
SEMA3F-208ENST00000470737 HMCN2Q8NDA2 5059 aa9.12□□□□□ -0.95
SEMA3F-208ENST00000470737 LRP1Q07954 4544 aaKnown RBP9.11□□□□□ -0.95
SEMA3F-208ENST00000470737 FAT3Q8TDW7 4589 aa9.11□□□□□ -0.95
SEMA3F-208ENST00000470737 OXTP01178 125 aa9.11□□□□□ -0.95
SEMA3F-208ENST00000470737 GNG4P50150 75 aa9.11□□□□□ -0.95
SEMA3F-208ENST00000470737 ELOBQ15370 118 aa9.11□□□□□ -0.95
SEMA3F-208ENST00000470737 CENPWQ5EE01 88 aa9.11□□□□□ -0.95
SEMA3F-208ENST00000470737 SSBP4Q9BWG4 385 aaPredicted RBP9.11□□□□□ -0.95
SEMA3F-208ENST00000470737 TRBV20OR9-2A0A075B6H5 130 aa9.1□□□□□ -0.95
SEMA3F-208ENST00000470737 A0A087WX48 190 aa9.1□□□□□ -0.95
SEMA3F-208ENST00000470737 M0R036 132 aa9.1□□□□□ -0.95
SEMA3F-208ENST00000470737 RHODO00212 210 aa9.1□□□□□ -0.95
SEMA3F-208ENST00000470737 ARMS2P0C7Q2 107 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms