RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 NAP1L6A6NFF2 107 aa2.24□□□□□ -2.05
COL11A1-208ENST00000470170 IBA57-AS1B1ANH7 110 aa2.24□□□□□ -2.05
COL11A1-208ENST00000470170 CCKP06307 115 aa2.24□□□□□ -2.05
COL11A1-208ENST00000470170 ERHP84090 104 aaKnown RBP2.24□□□□□ -2.05
COL11A1-208ENST00000470170 TDRG1Q3Y452 100 aa2.24□□□□□ -2.05
COL11A1-208ENST00000470170 S100A7L2Q5SY68 101 aa2.24□□□□□ -2.05
COL11A1-208ENST00000470170 PPDPFLQ8WWR9 84 aa2.24□□□□□ -2.05
COL11A1-208ENST00000470170 S100ZQ8WXG8 99 aa2.24□□□□□ -2.05
COL11A1-208ENST00000470170 TSLPQ969D9 159 aa2.24□□□□□ -2.05
COL11A1-208ENST00000470170 TRPM3Q9HCF6 1732 aaPredicted RBP2.24□□□□□ -2.05
COL11A1-208ENST00000470170 PTPRSQ13332 1948 aa2.24□□□□□ -2.05
COL11A1-208ENST00000470170 ABCC5O15440 1437 aa2.24□□□□□ -2.05
COL11A1-208ENST00000470170 EP400Q96L91 3159 aa2.24□□□□□ -2.05
COL11A1-208ENST00000470170 ZNF407Q9C0G0 2248 aa2.23□□□□□ -2.05
COL11A1-208ENST00000470170 ZMYM4Q5VZL5 1548 aa2.23□□□□□ -2.05
COL11A1-208ENST00000470170 PIEZO1Q92508 2521 aa2.23□□□□□ -2.05
COL11A1-208ENST00000470170 NYNRINQ9P2P1 1898 aaKnown RBP2.23□□□□□ -2.05
COL11A1-208ENST00000470170 ZNF142P52746 1687 aaPredicted RBP2.23□□□□□ -2.05
COL11A1-208ENST00000470170 PXDNLA1KZ92 1463 aa2.23□□□□□ -2.05
COL11A1-208ENST00000470170 TRAV10A0A0B4J240 114 aa2.23□□□□□ -2.05
COL11A1-208ENST00000470170 NDUFC1O43677 76 aa2.23□□□□□ -2.05
COL11A1-208ENST00000470170 HINT1P49773 126 aaPredicted RBP2.23□□□□□ -2.05
COL11A1-208ENST00000470170 GNG11P61952 73 aa2.23□□□□□ -2.05
COL11A1-208ENST00000470170 SEC11AP67812 179 aa2.23□□□□□ -2.05
COL11A1-208ENST00000470170 RHOHQ15669 191 aa2.23□□□□□ -2.05
COL11A1-208ENST00000470170 MPV17LQ2QL34 196 aa2.23□□□□□ -2.05
COL11A1-208ENST00000470170 KRTAP25-1Q3LHN0 102 aa2.23□□□□□ -2.05
COL11A1-208ENST00000470170 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
COL11A1-208ENST00000470170 ST20Q9HBF5 79 aa2.23□□□□□ -2.05
COL11A1-208ENST00000470170 SCN1AP35498 2009 aa2.23□□□□□ -2.05
COL11A1-208ENST00000470170 SCAPERQ9BY12 1400 aa2.23□□□□□ -2.05
COL11A1-208ENST00000470170 ZFC3H1O60293 1989 aaKnown RBP2.23□□□□□ -2.05
COL11A1-208ENST00000470170 HELZP42694 1942 aaKnown RBP2.23□□□□□ -2.05
COL11A1-208ENST00000470170 POLR1AO95602 1720 aaPredicted RBP2.22□□□□□ -2.05
COL11A1-208ENST00000470170 AGLP35573 1532 aa2.22□□□□□ -2.05
COL11A1-208ENST00000470170 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.22□□□□□ -2.05
COL11A1-208ENST00000470170 hADV29S1A0JD25 119 aa2.22□□□□□ -2.05
COL11A1-208ENST00000470170 H3BRM9 83 aa2.22□□□□□ -2.05
COL11A1-208ENST00000470170 MRPS14O60783 128 aaKnown RBP2.22□□□□□ -2.05
COL11A1-208ENST00000470170 ASAH2BP0C7U1 165 aa2.22□□□□□ -2.05
COL11A1-208ENST00000470170 CXCL8P10145 99 aa2.22□□□□□ -2.05
COL11A1-208ENST00000470170 UBE2G1P62253 170 aa2.22□□□□□ -2.05
COL11A1-208ENST00000470170 MIR22HGQ0VDD5 57 aa2.22□□□□□ -2.05
COL11A1-208ENST00000470170 C9orf116Q5BN46 136 aaPredicted RBP2.22□□□□□ -2.05
COL11A1-208ENST00000470170 SLC48A1Q6P1K1 146 aa2.22□□□□□ -2.05
COL11A1-208ENST00000470170 OR10AG1Q8NH19 301 aa2.22□□□□□ -2.05
COL11A1-208ENST00000470170 FAM213BQ8TBF2 198 aa2.22□□□□□ -2.05
COL11A1-208ENST00000470170 TRGV9Q99603 122 aa2.22□□□□□ -2.05
COL11A1-208ENST00000470170 PSORS1C2Q9UIG4 136 aa2.22□□□□□ -2.05
COL11A1-208ENST00000470170 CASKIN1Q8WXD9 1431 aa2.22□□□□□ -2.05
COL11A1-208ENST00000470170 MYH1P12882 1939 aa2.22□□□□□ -2.05
COL11A1-208ENST00000470170 EHBP1L1Q8N3D4 1523 aa2.22□□□□□ -2.05
COL11A1-208ENST00000470170 PLXNB1O43157 2135 aa2.21□□□□□ -2.06
COL11A1-208ENST00000470170 MYO3AQ8NEV4 1616 aa2.21□□□□□ -2.06
COL11A1-208ENST00000470170 GREB1Q4ZG55 1949 aa2.21□□□□□ -2.06
COL11A1-208ENST00000470170 TRAV17A0A0B4J275 112 aa2.21□□□□□ -2.06
COL11A1-208ENST00000470170 RGPD1P0DJD0 1748 aa2.21□□□□□ -2.06
COL11A1-208ENST00000470170 ZNF791Q3KP31 576 aaPredicted RBP2.21□□□□□ -2.06
COL11A1-208ENST00000470170 SERP2Q8N6R1 65 aa2.21□□□□□ -2.06
COL11A1-208ENST00000470170 ARAP2Q8WZ64 1704 aa2.21□□□□□ -2.06
COL11A1-208ENST00000470170 C20orf78Q9BR46 151 aa2.21□□□□□ -2.06
COL11A1-208ENST00000470170 CYP4F30PQ9H0H9 118 aa2.21□□□□□ -2.06
COL11A1-208ENST00000470170 MYOM1P52179 1685 aa2.21□□□□□ -2.06
COL11A1-208ENST00000470170 ADAMTS7Q9UKP4 1686 aa2.21□□□□□ -2.06
COL11A1-208ENST00000470170 TULP4Q9NRJ4 1543 aa2.21□□□□□ -2.06
COL11A1-208ENST00000470170 MARF1Q9Y4F3 1742 aaKnown RBP2.2□□□□□ -2.06
COL11A1-208ENST00000470170 TNRC6AQ8NDV7 1962 aaKnown RBP2.2□□□□□ -2.06
COL11A1-208ENST00000470170 TMSB15BA0A087X1C1 80 aa2.2□□□□□ -2.06
COL11A1-208ENST00000470170 TRAV13-2A0A0B4J235 113 aa2.2□□□□□ -2.06
COL11A1-208ENST00000470170 TRAV12-1A0A0B4J245 112 aa2.2□□□□□ -2.06
COL11A1-208ENST00000470170 TRBV10-3A0A0K0K1G6 114 aa2.2□□□□□ -2.06
COL11A1-208ENST00000470170 ODF3BA8MYP8 253 aa2.2□□□□□ -2.06
COL11A1-208ENST00000470170 HMGN3Q15651 99 aa2.2□□□□□ -2.06
COL11A1-208ENST00000470170 Q5BKY6 102 aa2.2□□□□□ -2.06
COL11A1-208ENST00000470170 CACFD1Q9UGQ2 172 aa2.2□□□□□ -2.06
COL11A1-208ENST00000470170 LHFPL6Q9Y693 200 aa2.2□□□□□ -2.06
COL11A1-208ENST00000470170 SPCS1Q9Y6A9 102 aa2.2□□□□□ -2.06
COL11A1-208ENST00000470170 R4GN34 69 aa2.2□□□□□ -2.06
COL11A1-208ENST00000470170 TET3O43151 1660 aa2.2□□□□□ -2.06
COL11A1-208ENST00000470170 IQGAP1P46940 1657 aa2.2□□□□□ -2.06
COL11A1-208ENST00000470170 ABCC1P33527 1531 aa2.2□□□□□ -2.06
COL11A1-208ENST00000470170 PLXNA3P51805 1871 aa2.2□□□□□ -2.06
COL11A1-208ENST00000470170 CACNA1BQ00975 2339 aa2.19□□□□□ -2.06
COL11A1-208ENST00000470170 OTOGLQ3ZCN5 2332 aa2.19□□□□□ -2.06
COL11A1-208ENST00000470170 A0A0C4DFX4 3053 aa2.19□□□□□ -2.06
COL11A1-208ENST00000470170 ATP7AQ04656 1500 aa2.19□□□□□ -2.06
COL11A1-208ENST00000470170 EFCAB6Q5THR3 1501 aa2.19□□□□□ -2.06
COL11A1-208ENST00000470170 ABCA10Q8WWZ4 1543 aa2.19□□□□□ -2.06
COL11A1-208ENST00000470170 KANTRA0A1W2PQU2 76 aa2.19□□□□□ -2.06
COL11A1-208ENST00000470170 CRYM-AS1A6NIL9 109 aa2.19□□□□□ -2.06
COL11A1-208ENST00000470170 CCL16O15467 120 aa2.19□□□□□ -2.06
COL11A1-208ENST00000470170 NDUFA11Q86Y39 141 aa2.19□□□□□ -2.06
COL11A1-208ENST00000470170 CLECL1Q8IZS7 167 aa2.19□□□□□ -2.06
COL11A1-208ENST00000470170 SPTSSBQ8NFR3 76 aa2.19□□□□□ -2.06
COL11A1-208ENST00000470170 CMTM2Q8TAZ6 248 aa2.19□□□□□ -2.06
COL11A1-208ENST00000470170 C4orf3Q8WVX3 66 aa2.19□□□□□ -2.06
COL11A1-208ENST00000470170 Q9BRP9 147 aa2.19□□□□□ -2.06
COL11A1-208ENST00000470170 KRTAP4-1Q9BYQ7 146 aa2.19□□□□□ -2.06
COL11A1-208ENST00000470170 DEPDC5O75140 1603 aa2.19□□□□□ -2.06
COL11A1-208ENST00000470170 CFAP74Q9C0B2 1584 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms