RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 MSRB1Q9NZV6 116 aa11.1□□□□□ -0.63
GTF3C2-209ENST00000470115 ABCA13Q86UQ4 5058 aa11.1□□□□□ -0.63
GTF3C2-209ENST00000470115 GRIFINA4D1Z8 144 aa11.09□□□□□ -0.63
GTF3C2-209ENST00000470115 K7EP13 123 aa11.09□□□□□ -0.63
GTF3C2-209ENST00000470115 CDK2AP2O75956 126 aa11.09□□□□□ -0.63
GTF3C2-209ENST00000470115 IL36BQ9NZH7 164 aa11.09□□□□□ -0.63
GTF3C2-209ENST00000470115 TMSB15BA0A087X1C1 80 aa11.08□□□□□ -0.64
GTF3C2-209ENST00000470115 A8MWV9 139 aa11.08□□□□□ -0.64
GTF3C2-209ENST00000470115 H3BVH4 76 aa11.08□□□□□ -0.64
GTF3C2-209ENST00000470115 CRYGDP07320 174 aa11.08□□□□□ -0.64
GTF3C2-209ENST00000470115 SRP19P09132 144 aaKnown RBP11.08□□□□□ -0.64
GTF3C2-209ENST00000470115 ARMS2P0C7Q2 107 aa11.08□□□□□ -0.64
GTF3C2-209ENST00000470115 CLLU1Q5K131 121 aa11.08□□□□□ -0.64
GTF3C2-209ENST00000470115 PIK3CD-AS1Q5SR53 167 aa11.08□□□□□ -0.64
GTF3C2-209ENST00000470115 DNLZQ5SXM8 178 aa11.08□□□□□ -0.64
GTF3C2-209ENST00000470115 DMRTA1Q5VZB9 504 aa11.08□□□□□ -0.64
GTF3C2-209ENST00000470115 ZFP2Q6ZN57 461 aa11.08□□□□□ -0.64
GTF3C2-209ENST00000470115 IGHV3-38A0A0C4DH36 116 aa11.07□□□□□ -0.64
GTF3C2-209ENST00000470115 ERVFC1-1P60608 527 aa11.07□□□□□ -0.64
GTF3C2-209ENST00000470115 SRSF3P84103 164 aaKnown RBP11.07□□□□□ -0.64
GTF3C2-209ENST00000470115 OR10J3Q5JRS4 329 aa11.07□□□□□ -0.64
GTF3C2-209ENST00000470115 ATP6V0E2Q8NHE4 81 aa11.07□□□□□ -0.64
GTF3C2-209ENST00000470115 DAZAP1Q96EP5 407 aaKnown RBP11.07□□□□□ -0.64
GTF3C2-209ENST00000470115 SMIM7Q9BQ49 75 aa11.07□□□□□ -0.64
GTF3C2-209ENST00000470115 MLST8Q9BVC4 326 aa11.07□□□□□ -0.64
GTF3C2-209ENST00000470115 SAMD10Q9BYL1 202 aa11.07□□□□□ -0.64
GTF3C2-209ENST00000470115 KRTAP4-5Q9BYR2 181 aa11.07□□□□□ -0.64
GTF3C2-209ENST00000470115 TRBV20OR9-2A0A075B6H5 130 aa11.06□□□□□ -0.64
GTF3C2-209ENST00000470115 TRAV8-6A0A0B4J262 113 aa11.06□□□□□ -0.64
GTF3C2-209ENST00000470115 ZNF727A8MUV8 499 aa11.06□□□□□ -0.64
GTF3C2-209ENST00000470115 EREGO14944 169 aa11.06□□□□□ -0.64
GTF3C2-209ENST00000470115 FUSP35637 526 aaKnown RBP eCLIP11.06□□□□□ -0.64
GTF3C2-209ENST00000470115 UFSP1Q6NVU6 142 aa11.06□□□□□ -0.64
GTF3C2-209ENST00000470115 C10orf126Q8N4M7 172 aa11.06□□□□□ -0.64
GTF3C2-209ENST00000470115 SMIM12Q96EX1 92 aa11.06□□□□□ -0.64
GTF3C2-209ENST00000470115 GTSF1LQ9H1H1 148 aa11.06□□□□□ -0.64
GTF3C2-209ENST00000470115 LINC01559Q495D7 138 aa11.05□□□□□ -0.64
GTF3C2-209ENST00000470115 SYT8Q8NBV8 401 aa11.05□□□□□ -0.64
GTF3C2-209ENST00000470115 BIN3Q9NQY0 253 aa11.05□□□□□ -0.64
GTF3C2-209ENST00000470115 Q9UF83 564 aa11.05□□□□□ -0.64
GTF3C2-209ENST00000470115 A0A087WTM6 91 aa11.04□□□□□ -0.64
GTF3C2-209ENST00000470115 GAGE12JA6NER3 117 aa11.04□□□□□ -0.64
GTF3C2-209ENST00000470115 NDUFS6O75380 124 aaKnown RBP11.04□□□□□ -0.64
GTF3C2-209ENST00000470115 IGLV2-8P01709 118 aa11.04□□□□□ -0.64
GTF3C2-209ENST00000470115 RPL19P84098 196 aaKnown RBP11.04□□□□□ -0.64
GTF3C2-209ENST00000470115 GAGE1Q13065 139 aa11.04□□□□□ -0.64
GTF3C2-209ENST00000470115 GAGE4Q13068 117 aa11.04□□□□□ -0.64
GTF3C2-209ENST00000470115 GAGE5Q13069 117 aa11.04□□□□□ -0.64
GTF3C2-209ENST00000470115 GAGE13Q4V321 117 aa11.04□□□□□ -0.64
GTF3C2-209ENST00000470115 LINC01556Q5JQF7 62 aa11.04□□□□□ -0.64
GTF3C2-209ENST00000470115 LELP1Q5T871 98 aa11.04□□□□□ -0.64
GTF3C2-209ENST00000470115 C14orf178Q8N769 122 aaPredicted RBP11.04□□□□□ -0.64
GTF3C2-209ENST00000470115 OCC1Q8TAD7 63 aa11.04□□□□□ -0.64
GTF3C2-209ENST00000470115 SMDT1Q9H4I9 107 aa11.04□□□□□ -0.64
GTF3C2-209ENST00000470115 SCRT2Q9NQ03 307 aa11.04□□□□□ -0.64
GTF3C2-209ENST00000470115 PGPEP1Q9NXJ5 209 aa11.04□□□□□ -0.64
GTF3C2-209ENST00000470115 PHLDA3Q9Y5J5 127 aa11.04□□□□□ -0.64
GTF3C2-209ENST00000470115 C9JQL5 133 aa11.03□□□□□ -0.64
GTF3C2-209ENST00000470115 MAPKAPK5-AS1Q8N8E1 139 aa11.03□□□□□ -0.64
GTF3C2-209ENST00000470115 M0R381 172 aa11.02□□□□□ -0.65
GTF3C2-209ENST00000470115 P01737 135 aa11.02□□□□□ -0.65
GTF3C2-209ENST00000470115 IGHV3-30P01768 117 aa11.02□□□□□ -0.65
GTF3C2-209ENST00000470115 IGHV3-33P01772 117 aa11.02□□□□□ -0.65
GTF3C2-209ENST00000470115 IGHV3-30-3P0DP02 117 aa11.02□□□□□ -0.65
GTF3C2-209ENST00000470115 IGHV3-30-5P0DP03 117 aa11.02□□□□□ -0.65
GTF3C2-209ENST00000470115 FAM74A4Q5TZK3 123 aa11.02□□□□□ -0.65
GTF3C2-209ENST00000470115 SFRP2Q96HF1 295 aa11.02□□□□□ -0.65
GTF3C2-209ENST00000470115 A0A087WWL8 130 aa11.01□□□□□ -0.65
GTF3C2-209ENST00000470115 IBA57-AS1B1ANH7 110 aa11.01□□□□□ -0.65
GTF3C2-209ENST00000470115 RHODO00212 210 aa11.01□□□□□ -0.65
GTF3C2-209ENST00000470115 LINC00694P0DN24 101 aa11.01□□□□□ -0.65
GTF3C2-209ENST00000470115 FAM74A3Q4VXF1 159 aa11.01□□□□□ -0.65
GTF3C2-209ENST00000470115 OR2D3Q8NGH3 330 aa11.01□□□□□ -0.65
GTF3C2-209ENST00000470115 K7EN84 100 aa11□□□□□ -0.65
GTF3C2-209ENST00000470115 TMEM241Q24JQ0 296 aa11□□□□□ -0.65
GTF3C2-209ENST00000470115 ZFP82Q8N141 532 aa11□□□□□ -0.65
GTF3C2-209ENST00000470115 RNASE7Q9H1E1 156 aaKnown RBP11□□□□□ -0.65
GTF3C2-209ENST00000470115 Q9HAA7 133 aa11□□□□□ -0.65
GTF3C2-209ENST00000470115 PSCAO43653 123 aa10.99□□□□□ -0.65
GTF3C2-209ENST00000470115 COMMD7Q86VX2 200 aa10.99□□□□□ -0.65
GTF3C2-209ENST00000470115 Q8N3U1 123 aa10.99□□□□□ -0.65
GTF3C2-209ENST00000470115 TPPP3Q9BW30 176 aa10.99□□□□□ -0.65
GTF3C2-209ENST00000470115 XKRY2A2RUG3 117 aa10.98□□□□□ -0.65
GTF3C2-209ENST00000470115 C19orf71A6NCJ1 209 aa10.98□□□□□ -0.65
GTF3C2-209ENST00000470115 ADIRFQ15847 76 aa10.98□□□□□ -0.65
GTF3C2-209ENST00000470115 CDPF1Q6NVV7 123 aa10.98□□□□□ -0.65
GTF3C2-209ENST00000470115 LINC01551Q86U37 167 aa10.98□□□□□ -0.65
GTF3C2-209ENST00000470115 NUDT10Q8NFP7 164 aa10.98□□□□□ -0.65
GTF3C2-209ENST00000470115 NUDT11Q96G61 164 aa10.98□□□□□ -0.65
GTF3C2-209ENST00000470115 NAT8Q9UHE5 227 aa10.98□□□□□ -0.65
GTF3C2-209ENST00000470115 GZMBP10144 247 aa10.97□□□□□ -0.65
GTF3C2-209ENST00000470115 RPS20P60866 119 aaKnown RBP10.97□□□□□ -0.65
GTF3C2-209ENST00000470115 SSTP61278 116 aa10.97□□□□□ -0.65
GTF3C2-209ENST00000470115 Q8N1X5 172 aa10.97□□□□□ -0.65
GTF3C2-209ENST00000470115 OR10AG1Q8NH19 301 aa10.97□□□□□ -0.65
GTF3C2-209ENST00000470115 RPP21Q9H633 154 aaKnown RBP10.97□□□□□ -0.65
GTF3C2-209ENST00000470115 A0A087WWC5 75 aa10.96□□□□□ -0.65
GTF3C2-209ENST00000470115 LRCOL1A6NCL2 159 aa10.96□□□□□ -0.65
GTF3C2-209ENST00000470115 GATCO43716 136 aaKnown RBP10.96□□□□□ -0.65
GTF3C2-209ENST00000470115 MUC21A0A0G2JKD1 596 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms