RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 MRAP2Q96G30 205 aa9.13□□□□□ -0.95
TRAF4-208ENST00000469529 LAMTOR2Q9Y2Q5 125 aa9.13□□□□□ -0.95
TRAF4-208ENST00000469529 PRSS47A8MTI9 375 aa9.12□□□□□ -0.95
TRAF4-208ENST00000469529 Q0VG73 95 aa9.12□□□□□ -0.95
TRAF4-208ENST00000469529 MRPL51Q4U2R6 128 aaKnown RBP9.12□□□□□ -0.95
TRAF4-208ENST00000469529 AMN1Q8IY45 258 aa9.12□□□□□ -0.95
TRAF4-208ENST00000469529 C14orf178Q8N769 122 aaPredicted RBP9.12□□□□□ -0.95
TRAF4-208ENST00000469529 TM2D3Q9BRN9 247 aa9.12□□□□□ -0.95
TRAF4-208ENST00000469529 ALKBH7Q9BT30 221 aaPredicted RBP9.12□□□□□ -0.95
TRAF4-208ENST00000469529 RHODO00212 210 aa9.11□□□□□ -0.95
TRAF4-208ENST00000469529 HIST1H2BKO60814 126 aa9.11□□□□□ -0.95
TRAF4-208ENST00000469529 PPP1R17O96001 155 aa9.11□□□□□ -0.95
TRAF4-208ENST00000469529 HIST1H2BJP06899 126 aa9.11□□□□□ -0.95
TRAF4-208ENST00000469529 SMIM17P0DL12 118 aa9.11□□□□□ -0.95
TRAF4-208ENST00000469529 HIST1H2BOP23527 126 aa9.11□□□□□ -0.95
TRAF4-208ENST00000469529 HIST1H2BBP33778 126 aa9.11□□□□□ -0.95
TRAF4-208ENST00000469529 HIST1H2BDP58876 126 aa9.11□□□□□ -0.95
TRAF4-208ENST00000469529 SSTP61278 116 aa9.11□□□□□ -0.95
TRAF4-208ENST00000469529 HIST1H2BCP62807 126 aa9.11□□□□□ -0.95
TRAF4-208ENST00000469529 HIST2H2BEQ16778 126 aa9.11□□□□□ -0.95
TRAF4-208ENST00000469529 COA6Q5JTJ3 125 aaKnown RBP9.11□□□□□ -0.95
TRAF4-208ENST00000469529 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.11□□□□□ -0.95
TRAF4-208ENST00000469529 CFAP126Q5VTH2 177 aa9.11□□□□□ -0.95
TRAF4-208ENST00000469529 HIST1H2BHQ93079 126 aa9.11□□□□□ -0.95
TRAF4-208ENST00000469529 HIST1H2BNQ99877 126 aa9.11□□□□□ -0.95
TRAF4-208ENST00000469529 HIST1H2BMQ99879 126 aa9.11□□□□□ -0.95
TRAF4-208ENST00000469529 NOP10Q9NPE3 64 aaKnown RBP9.11□□□□□ -0.95
TRAF4-208ENST00000469529 TRAV4A0A0B4J268 109 aa9.1□□□□□ -0.95
TRAF4-208ENST00000469529 TEX48A0A1B0GUV7 120 aa9.1□□□□□ -0.95
TRAF4-208ENST00000469529 DEFB121Q5J5C9 76 aa9.1□□□□□ -0.95
TRAF4-208ENST00000469529 OR10J3Q5JRS4 329 aa9.1□□□□□ -0.95
TRAF4-208ENST00000469529 Q6ZTI0 123 aa9.1□□□□□ -0.95
TRAF4-208ENST00000469529 SBSPONQ8IVN8 264 aa9.1□□□□□ -0.95
TRAF4-208ENST00000469529 ORMDL3Q8N138 153 aa9.1□□□□□ -0.95
TRAF4-208ENST00000469529 JPT2Q9H910 190 aa9.1□□□□□ -0.95
TRAF4-208ENST00000469529 MUC4Q99102 2169 aa9.1□□□□□ -0.95
TRAF4-208ENST00000469529 TRGV1A0A0A0MS02 117 aa9.09□□□□□ -0.95
TRAF4-208ENST00000469529 IGHV4-28A0A0C4DH34 117 aa9.09□□□□□ -0.95
TRAF4-208ENST00000469529 SPATA25Q9BR10 227 aa9.09□□□□□ -0.95
TRAF4-208ENST00000469529 SAMD10Q9BYL1 202 aa9.09□□□□□ -0.95
TRAF4-208ENST00000469529 C11orf68Q9H3H3 251 aaKnown RBP9.09□□□□□ -0.95
TRAF4-208ENST00000469529 DKK2Q9UBU2 259 aa9.09□□□□□ -0.95
TRAF4-208ENST00000469529 CKS2P33552 79 aa9.08□□□□□ -0.96
TRAF4-208ENST00000469529 RPL32P62910 135 aaKnown RBP9.08□□□□□ -0.96
TRAF4-208ENST00000469529 KIAA1644Q3SXP7 199 aa9.08□□□□□ -0.96
TRAF4-208ENST00000469529 MRPL16Q9NX20 251 aaKnown RBP9.08□□□□□ -0.96
TRAF4-208ENST00000469529 D6R8Y8 96 aa9.07□□□□□ -0.96
TRAF4-208ENST00000469529 M0QY20 66 aa9.07□□□□□ -0.96
TRAF4-208ENST00000469529 IGHV3-53P01767 116 aa9.07□□□□□ -0.96
TRAF4-208ENST00000469529 SPART-AS1P0CW21 52 aa9.07□□□□□ -0.96
TRAF4-208ENST00000469529 SRIP30626 198 aa9.07□□□□□ -0.96
TRAF4-208ENST00000469529 NRACQ8N912 160 aa9.07□□□□□ -0.96
TRAF4-208ENST00000469529 OR4C5Q8NGB2 326 aa9.07□□□□□ -0.96
TRAF4-208ENST00000469529 PRELID3AQ96N28 172 aa9.07□□□□□ -0.96
TRAF4-208ENST00000469529 C20orf78Q9BR46 151 aa9.07□□□□□ -0.96
TRAF4-208ENST00000469529 NBEAL2Q6ZNJ1 2754 aa9.07□□□□□ -0.96
TRAF4-208ENST00000469529 A0A087WWL8 130 aa9.06□□□□□ -0.96
TRAF4-208ENST00000469529 TRBV6-5A0A0K0K1A5 114 aa9.06□□□□□ -0.96
TRAF4-208ENST00000469529 H7C1H1 209 aa9.06□□□□□ -0.96
TRAF4-208ENST00000469529 FAM222AQ5U5X8 452 aa9.06□□□□□ -0.96
TRAF4-208ENST00000469529 C18orf32Q8TCD1 76 aa9.06□□□□□ -0.96
TRAF4-208ENST00000469529 B9D2Q9BPU9 175 aa9.06□□□□□ -0.96
TRAF4-208ENST00000469529 TMA7Q9Y2S6 64 aaKnown RBP9.06□□□□□ -0.96
TRAF4-208ENST00000469529 TRGV2A0A075B6R0 118 aa9.05□□□□□ -0.96
TRAF4-208ENST00000469529 TNFRSF6BO95407 300 aa9.05□□□□□ -0.96
TRAF4-208ENST00000469529 ESDP10768 282 aa9.05□□□□□ -0.96
TRAF4-208ENST00000469529 SUMO4Q6EEV6 95 aa9.05□□□□□ -0.96
TRAF4-208ENST00000469529 TRBV10-1A0A0K0K1A3 114 aa9.04□□□□□ -0.96
TRAF4-208ENST00000469529 TRBV6-4A0A1B0GX49 114 aa9.04□□□□□ -0.96
TRAF4-208ENST00000469529 GAGE12BA1L429 117 aa9.04□□□□□ -0.96
TRAF4-208ENST00000469529 LINC01546A6NGU7 62 aa9.04□□□□□ -0.96
TRAF4-208ENST00000469529 GAGE7O76087 117 aa9.04□□□□□ -0.96
TRAF4-208ENST00000469529 NHLRC4P0CG21 123 aaPredicted RBP9.04□□□□□ -0.96
TRAF4-208ENST00000469529 GAGE12FP0CL80 117 aa9.04□□□□□ -0.96
TRAF4-208ENST00000469529 GAGE12GP0CL81 117 aa9.04□□□□□ -0.96
TRAF4-208ENST00000469529 GAGE12IP0CL82 117 aa9.04□□□□□ -0.96
TRAF4-208ENST00000469529 EMP1P54849 157 aa9.04□□□□□ -0.96
TRAF4-208ENST00000469529 FHL2Q14192 279 aa9.04□□□□□ -0.96
TRAF4-208ENST00000469529 ZNF479Q96JC4 524 aa9.04□□□□□ -0.96
TRAF4-208ENST00000469529 DNAJC30Q96LL9 226 aa9.04□□□□□ -0.96
TRAF4-208ENST00000469529 NIT2Q9NQR4 276 aa9.04□□□□□ -0.96
TRAF4-208ENST00000469529 C5orf52A6NGY3 159 aa9.03□□□□□ -0.96
TRAF4-208ENST00000469529 F5H697 171 aa9.03□□□□□ -0.96
TRAF4-208ENST00000469529 K7EMI3 77 aa9.03□□□□□ -0.96
TRAF4-208ENST00000469529 GAS8-AS1O95177 125 aa9.03□□□□□ -0.96
TRAF4-208ENST00000469529 NPYP01303 97 aa9.03□□□□□ -0.96
TRAF4-208ENST00000469529 MGPP08493 103 aa9.03□□□□□ -0.96
TRAF4-208ENST00000469529 GATA1P15976 413 aaPredicted RBP9.03□□□□□ -0.96
TRAF4-208ENST00000469529 HOXA5P20719 270 aa9.03□□□□□ -0.96
TRAF4-208ENST00000469529 POLR2KP53803 58 aaKnown RBP9.03□□□□□ -0.96
TRAF4-208ENST00000469529 FAM74A4Q5TZK3 123 aa9.03□□□□□ -0.96
TRAF4-208ENST00000469529 ZMAT4Q9H898 229 aa9.03□□□□□ -0.96
TRAF4-208ENST00000469529 Q6ZSN1 163 aa9.02□□□□□ -0.97
TRAF4-208ENST00000469529 CHCHD1Q96BP2 118 aaKnown RBP9.02□□□□□ -0.97
TRAF4-208ENST00000469529 NXT2Q9NPJ8 142 aaKnown RBP9.02□□□□□ -0.97
TRAF4-208ENST00000469529 IGLV2-18A0A075B6J9 118 aa9.01□□□□□ -0.97
TRAF4-208ENST00000469529 TRAV26-2A0A0B4J265 109 aa9.01□□□□□ -0.97
TRAF4-208ENST00000469529 TRBV27A0A0K0K1C4 114 aa9.01□□□□□ -0.97
TRAF4-208ENST00000469529 SMKR1H3BMG3 65 aa9.01□□□□□ -0.97
TRAF4-208ENST00000469529 S100A6P06703 90 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms