RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 GAGE4Q13068 117 aa7.31□□□□□ -1.24
COL4A3-204ENST00000469504 GAGE5Q13069 117 aa7.31□□□□□ -1.24
COL4A3-204ENST00000469504 GAGE13Q4V321 117 aa7.31□□□□□ -1.24
COL4A3-204ENST00000469504 Q5BKY6 102 aa7.31□□□□□ -1.24
COL4A3-204ENST00000469504 PHLDA3Q9Y5J5 127 aa7.31□□□□□ -1.24
COL4A3-204ENST00000469504 URGCP-MRPS24S4R325 110 aa7.31□□□□□ -1.24
COL4A3-204ENST00000469504 TRBV10-1A0A0K0K1A3 114 aa7.3□□□□□ -1.24
COL4A3-204ENST00000469504 MAP1LC3B2A6NCE7 125 aa7.3□□□□□ -1.24
COL4A3-204ENST00000469504 H3BVH4 76 aa7.3□□□□□ -1.24
COL4A3-204ENST00000469504 S100A9P06702 114 aaKnown RBP7.3□□□□□ -1.24
COL4A3-204ENST00000469504 ARMS2P0C7Q2 107 aa7.3□□□□□ -1.24
COL4A3-204ENST00000469504 TPT1P13693 172 aaKnown RBP7.3□□□□□ -1.24
COL4A3-204ENST00000469504 UBE2G2P60604 165 aa7.3□□□□□ -1.24
COL4A3-204ENST00000469504 ELOBQ15370 118 aa7.3□□□□□ -1.24
COL4A3-204ENST00000469504 ZNF674Q2M3X9 581 aa7.3□□□□□ -1.24
COL4A3-204ENST00000469504 Q6ZSN1 163 aa7.3□□□□□ -1.24
COL4A3-204ENST00000469504 ZFP82Q8N141 532 aa7.3□□□□□ -1.24
COL4A3-204ENST00000469504 ZC2HC1AQ96GY0 325 aa7.3□□□□□ -1.24
COL4A3-204ENST00000469504 SFRP2Q96HF1 295 aa7.3□□□□□ -1.24
COL4A3-204ENST00000469504 MAP1LC3BQ9GZQ8 125 aa7.3□□□□□ -1.24
COL4A3-204ENST00000469504 SH2D1AO60880 128 aa7.29□□□□□ -1.24
COL4A3-204ENST00000469504 LTAP01374 205 aa7.29□□□□□ -1.24
COL4A3-204ENST00000469504 KCNIP4Q6PIL6 250 aa7.29□□□□□ -1.24
COL4A3-204ENST00000469504 CXCL1P09341 107 aa7.28□□□□□ -1.24
COL4A3-204ENST00000469504 CRIP1P50238 77 aa7.28□□□□□ -1.24
COL4A3-204ENST00000469504 RPL36AP83881 106 aaKnown RBP7.28□□□□□ -1.24
COL4A3-204ENST00000469504 ZNF345Q14585 488 aa7.28□□□□□ -1.24
COL4A3-204ENST00000469504 NIT1Q86X76 327 aa7.28□□□□□ -1.24
COL4A3-204ENST00000469504 C14orf178Q8N769 122 aaPredicted RBP7.28□□□□□ -1.24
COL4A3-204ENST00000469504 RPL36ALQ969Q0 106 aaKnown RBP7.28□□□□□ -1.24
COL4A3-204ENST00000469504 SAMD10Q9BYL1 202 aa7.28□□□□□ -1.24
COL4A3-204ENST00000469504 UMAD1C9J7I0 102 aa7.27□□□□□ -1.25
COL4A3-204ENST00000469504 M0R036 132 aa7.27□□□□□ -1.25
COL4A3-204ENST00000469504 ARPC5O15511 151 aa7.27□□□□□ -1.25
COL4A3-204ENST00000469504 SMR3BP02814 79 aaPredicted RBP7.27□□□□□ -1.25
COL4A3-204ENST00000469504 AKR1C3P42330 323 aa7.27□□□□□ -1.25
COL4A3-204ENST00000469504 PKIAP61925 76 aa7.27□□□□□ -1.25
COL4A3-204ENST00000469504 Q0VG73 95 aa7.27□□□□□ -1.25
COL4A3-204ENST00000469504 RGS21Q2M5E4 152 aa7.27□□□□□ -1.25
COL4A3-204ENST00000469504 FAM74A4Q5TZK3 123 aa7.27□□□□□ -1.25
COL4A3-204ENST00000469504 CST9LP1Q5W188 147 aa7.27□□□□□ -1.25
COL4A3-204ENST00000469504 Q6ZSA8 131 aa7.27□□□□□ -1.25
COL4A3-204ENST00000469504 DAZ4Q86SG3 579 aaKnown RBP7.27□□□□□ -1.25
COL4A3-204ENST00000469504 Q8N976 141 aa7.27□□□□□ -1.25
COL4A3-204ENST00000469504 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.27□□□□□ -1.25
COL4A3-204ENST00000469504 JPT2Q9H910 190 aa7.27□□□□□ -1.25
COL4A3-204ENST00000469504 DAZ3Q9NR90 486 aaKnown RBP7.27□□□□□ -1.25
COL4A3-204ENST00000469504 CYTL1Q9NRR1 136 aa7.27□□□□□ -1.25
COL4A3-204ENST00000469504 VPS13BQ7Z7G8 4022 aa7.26□□□□□ -1.25
COL4A3-204ENST00000469504 TRBV7-3A0A075B6L6 115 aa7.26□□□□□ -1.25
COL4A3-204ENST00000469504 A0A087WX48 190 aa7.26□□□□□ -1.25
COL4A3-204ENST00000469504 G3V3Q6 166 aa7.26□□□□□ -1.25
COL4A3-204ENST00000469504 M0R381 172 aa7.26□□□□□ -1.25
COL4A3-204ENST00000469504 PLA2G1BP04054 148 aaKnown RBP7.26□□□□□ -1.25
COL4A3-204ENST00000469504 OR10G8Q8NGN5 311 aa7.26□□□□□ -1.25
COL4A3-204ENST00000469504 MYCBP2O75592 4640 aa7.25□□□□□ -1.25
COL4A3-204ENST00000469504 GRIFINA4D1Z8 144 aa7.25□□□□□ -1.25
COL4A3-204ENST00000469504 PFDN1O60925 122 aa7.25□□□□□ -1.25
COL4A3-204ENST00000469504 RAB4BP61018 213 aa7.25□□□□□ -1.25
COL4A3-204ENST00000469504 UBE2D3P61077 147 aa7.25□□□□□ -1.25
COL4A3-204ENST00000469504 UBE2D2P62837 147 aa7.25□□□□□ -1.25
COL4A3-204ENST00000469504 EIF5AP63241 154 aaKnown RBP7.25□□□□□ -1.25
COL4A3-204ENST00000469504 ATRAIDQ6UW56 229 aa7.25□□□□□ -1.25
COL4A3-204ENST00000469504 MBD3L1Q8WWY6 194 aa7.25□□□□□ -1.25
COL4A3-204ENST00000469504 HERC1Q15751 4861 aa7.25□□□□□ -1.25
COL4A3-204ENST00000469504 A0A087WWL8 130 aa7.24□□□□□ -1.25
COL4A3-204ENST00000469504 HMSDA8MTL9 139 aa7.24□□□□□ -1.25
COL4A3-204ENST00000469504 C14orf177Q52M58 125 aa7.24□□□□□ -1.25
COL4A3-204ENST00000469504 TMEM97Q5BJF2 176 aa7.24□□□□□ -1.25
COL4A3-204ENST00000469504 KCNRGQ8N5I3 272 aa7.24□□□□□ -1.25
COL4A3-204ENST00000469504 Q9UF83 564 aa7.24□□□□□ -1.25
COL4A3-204ENST00000469504 DNAH8Q96JB1 4490 aa7.23□□□□□ -1.25
COL4A3-204ENST00000469504 IGKV2D-24A0A075B6R9 120 aa7.23□□□□□ -1.25
COL4A3-204ENST00000469504 TMSB15BA0A087X1C1 80 aa7.23□□□□□ -1.25
COL4A3-204ENST00000469504 TRBV6-8A0A0A6YYG3 113 aa7.23□□□□□ -1.25
COL4A3-204ENST00000469504 A0A0D9SG52 128 aa7.23□□□□□ -1.25
COL4A3-204ENST00000469504 SNAI2O43623 268 aa7.23□□□□□ -1.25
COL4A3-204ENST00000469504 PAGE4O60829 102 aa7.23□□□□□ -1.25
COL4A3-204ENST00000469504 OR5AL1P0C617 328 aa7.23□□□□□ -1.25
COL4A3-204ENST00000469504 WFDC2Q14508 124 aa7.23□□□□□ -1.25
COL4A3-204ENST00000469504 SFT2D1Q8WV19 159 aa7.23□□□□□ -1.25
COL4A3-204ENST00000469504 MLST8Q9BVC4 326 aa7.23□□□□□ -1.25
COL4A3-204ENST00000469504 SSBP4Q9BWG4 385 aaPredicted RBP7.23□□□□□ -1.25
COL4A3-204ENST00000469504 ZNF471Q9BX82 626 aaPredicted RBP7.23□□□□□ -1.25
COL4A3-204ENST00000469504 FAM30AQ9NZY2 134 aa7.23□□□□□ -1.25
COL4A3-204ENST00000469504 KLK12Q9UKR0 248 aa7.23□□□□□ -1.25
COL4A3-204ENST00000469504 SRRM2Q9UQ35 2752 aaKnown RBP7.23□□□□□ -1.25
COL4A3-204ENST00000469504 RBFOX3A6NFN3 312 aa7.22□□□□□ -1.25
COL4A3-204ENST00000469504 PRR27Q6MZM9 219 aa7.22□□□□□ -1.25
COL4A3-204ENST00000469504 BAGE2Q86Y30 109 aa7.22□□□□□ -1.25
COL4A3-204ENST00000469504 BAALCQ8WXS3 180 aa7.22□□□□□ -1.25
COL4A3-204ENST00000469504 UBE2WQ96B02 151 aa7.22□□□□□ -1.25
COL4A3-204ENST00000469504 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.21□□□□□ -1.26
COL4A3-204ENST00000469504 KANTRA0A1W2PQU2 76 aa7.21□□□□□ -1.26
COL4A3-204ENST00000469504 LECT2O14960 151 aa7.21□□□□□ -1.26
COL4A3-204ENST00000469504 CRPP02741 224 aa7.21□□□□□ -1.26
COL4A3-204ENST00000469504 HAMPP81172 84 aa7.21□□□□□ -1.26
COL4A3-204ENST00000469504 ZNF56Q15929 161 aa7.21□□□□□ -1.26
COL4A3-204ENST00000469504 SPANXN1Q5VSR9 72 aa7.21□□□□□ -1.26
COL4A3-204ENST00000469504 FAM213BQ8TBF2 198 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms