RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 TWIST1Q15672 202 aa16.15■□□□□ 0.18
SREBF1-208ENST00000469356 CTDSP1Q9GZU7 261 aa16.15■□□□□ 0.18
SREBF1-208ENST00000469356 A0A1B0GUT8 65 aa16.14■□□□□ 0.17
SREBF1-208ENST00000469356 SMIM27A0A1W2PRY6 76 aa16.14■□□□□ 0.17
SREBF1-208ENST00000469356 PAX4O43316 350 aa16.14■□□□□ 0.17
SREBF1-208ENST00000469356 TMEM88Q6PEY1 159 aa16.14■□□□□ 0.17
SREBF1-208ENST00000469356 NACAE9PAV3 2078 aa16.14■□□□□ 0.17
SREBF1-208ENST00000469356 TRAV26-1A0A087WT03 109 aa16.13■□□□□ 0.17
SREBF1-208ENST00000469356 RIGQ13278 110 aa16.13■□□□□ 0.17
SREBF1-208ENST00000469356 FAM74A4Q5TZK3 123 aa16.13■□□□□ 0.17
SREBF1-208ENST00000469356 JPT2Q9H910 190 aa16.13■□□□□ 0.17
SREBF1-208ENST00000469356 CRYBA4P53673 196 aa16.12■□□□□ 0.17
SREBF1-208ENST00000469356 PRADC1Q9BSG0 188 aa16.12■□□□□ 0.17
SREBF1-208ENST00000469356 IGHV3-73A0A0B4J1V6 119 aa16.11■□□□□ 0.17
SREBF1-208ENST00000469356 TRBV6-4A0A1B0GX49 114 aa16.11■□□□□ 0.17
SREBF1-208ENST00000469356 APOC3P02656 99 aa16.11■□□□□ 0.17
SREBF1-208ENST00000469356 CRYGDP07320 174 aa16.11■□□□□ 0.17
SREBF1-208ENST00000469356 GATA1P15976 413 aaPredicted RBP16.11■□□□□ 0.17
SREBF1-208ENST00000469356 SVBPQ8N300 66 aa16.11■□□□□ 0.17
SREBF1-208ENST00000469356 NUP35Q8NFH5 326 aa16.11■□□□□ 0.17
SREBF1-208ENST00000469356 A0A087WWL8 130 aa16.1■□□□□ 0.17
SREBF1-208ENST00000469356 A0A0J9YY99 117 aa16.1■□□□□ 0.17
SREBF1-208ENST00000469356 RHEBQ15382 184 aa16.1■□□□□ 0.17
SREBF1-208ENST00000469356 RHOHQ15669 191 aa16.1■□□□□ 0.17
SREBF1-208ENST00000469356 C14orf178Q8N769 122 aaPredicted RBP16.1■□□□□ 0.17
SREBF1-208ENST00000469356 A0A1B0GW15 77 aa16.09■□□□□ 0.17
SREBF1-208ENST00000469356 SNAPINO95295 136 aa16.09■□□□□ 0.17
SREBF1-208ENST00000469356 SLC7A5P1Q8MH63 180 aa16.09■□□□□ 0.17
SREBF1-208ENST00000469356 SAMD10Q9BYL1 202 aa16.09■□□□□ 0.17
SREBF1-208ENST00000469356 DPH3P1Q9H4G8 78 aa16.09■□□□□ 0.17
SREBF1-208ENST00000469356 NUDT3O95989 172 aa16.08■□□□□ 0.16
SREBF1-208ENST00000469356 S100A8P05109 93 aa16.08■□□□□ 0.16
SREBF1-208ENST00000469356 RAB4BP61018 213 aa16.08■□□□□ 0.16
SREBF1-208ENST00000469356 ZNF56Q15929 161 aa16.08■□□□□ 0.16
SREBF1-208ENST00000469356 UFSP1Q6NVU6 142 aa16.08■□□□□ 0.16
SREBF1-208ENST00000469356 CLRN3Q8NCR9 226 aa16.08■□□□□ 0.16
SREBF1-208ENST00000469356 IMMP2LQ96T52 175 aa16.08■□□□□ 0.16
SREBF1-208ENST00000469356 MSRB1Q9NZV6 116 aa16.08■□□□□ 0.16
SREBF1-208ENST00000469356 APLNQ9ULZ1 77 aa16.08■□□□□ 0.16
SREBF1-208ENST00000469356 ICOSQ9Y6W8 199 aa16.08■□□□□ 0.16
SREBF1-208ENST00000469356 F5H697 171 aa16.07■□□□□ 0.16
SREBF1-208ENST00000469356 MRPL23Q16540 153 aaKnown RBP16.07■□□□□ 0.16
SREBF1-208ENST00000469356 KCNIP4Q6PIL6 250 aa16.07■□□□□ 0.16
SREBF1-208ENST00000469356 TMEM242Q9NWH2 141 aa16.07■□□□□ 0.16
SREBF1-208ENST00000469356 A0A087WWC5 75 aa16.06■□□□□ 0.16
SREBF1-208ENST00000469356 SH2D6Q7Z4S9 175 aa16.06■□□□□ 0.16
SREBF1-208ENST00000469356 SLC25A29Q8N8R3 303 aa16.06■□□□□ 0.16
SREBF1-208ENST00000469356 VSIG2Q96IQ7 327 aa16.06■□□□□ 0.16
SREBF1-208ENST00000469356 C7orf77A4D0Y5 90 aa16.05■□□□□ 0.16
SREBF1-208ENST00000469356 K7EQD1 137 aa16.05■□□□□ 0.16
SREBF1-208ENST00000469356 MGPP08493 103 aa16.05■□□□□ 0.16
SREBF1-208ENST00000469356 EVI2AP22794 236 aa16.05■□□□□ 0.16
SREBF1-208ENST00000469356 S100PP25815 95 aa16.05■□□□□ 0.16
SREBF1-208ENST00000469356 RPS10P5Q9NQ39 176 aa16.05■□□□□ 0.16
SREBF1-208ENST00000469356 H7C1H1 209 aa16.04■□□□□ 0.16
SREBF1-208ENST00000469356 GYPEP15421 78 aa16.04■□□□□ 0.16
SREBF1-208ENST00000469356 KIF25-AS1Q9Y6Z4 181 aa16.04■□□□□ 0.16
SREBF1-208ENST00000469356 ATP5L2Q7Z4Y8 100 aa16.03■□□□□ 0.16
SREBF1-208ENST00000469356 TRBV10-1A0A0K0K1A3 114 aa16.02■□□□□ 0.16
SREBF1-208ENST00000469356 SRIP30626 198 aa16.02■□□□□ 0.16
SREBF1-208ENST00000469356 BTF3L4Q96K17 158 aa16.02■□□□□ 0.16
SREBF1-208ENST00000469356 TMEM191AQ9H0A3 160 aa16.02■□□□□ 0.16
SREBF1-208ENST00000469356 P0DMU3 169 aa16.01■□□□□ 0.15
SREBF1-208ENST00000469356 FAM231AP0DMU4 169 aa16.01■□□□□ 0.15
SREBF1-208ENST00000469356 FAM231CP0DMU5 169 aa16.01■□□□□ 0.15
SREBF1-208ENST00000469356 FAM3BP58499 235 aaPredicted RBP16.01■□□□□ 0.15
SREBF1-208ENST00000469356 FRZBQ92765 325 aa16.01■□□□□ 0.15
SREBF1-208ENST00000469356 DYNC2H1Q8NCM8 4307 aaKnown RBP16■□□□□ 0.15
SREBF1-208ENST00000469356 CSMD3Q7Z407 3707 aa16■□□□□ 0.15
SREBF1-208ENST00000469356 TRAV9-1A0A075B6T8 112 aa16■□□□□ 0.15
SREBF1-208ENST00000469356 HBBP68871 147 aa16■□□□□ 0.15
SREBF1-208ENST00000469356 NEGR1Q7Z3B1 354 aa16■□□□□ 0.15
SREBF1-208ENST00000469356 STARD9Q9P2P6 4700 aa16■□□□□ 0.15
SREBF1-208ENST00000469356 A0A096LPF7 62 aa15.99■□□□□ 0.15
SREBF1-208ENST00000469356 CCL18P55774 89 aa15.99■□□□□ 0.15
SREBF1-208ENST00000469356 RPL36AP83881 106 aaKnown RBP15.99■□□□□ 0.15
SREBF1-208ENST00000469356 MRPL54Q6P161 138 aaKnown RBP15.99■□□□□ 0.15
SREBF1-208ENST00000469356 Q6ZSN1 163 aa15.99■□□□□ 0.15
SREBF1-208ENST00000469356 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.99■□□□□ 0.15
SREBF1-208ENST00000469356 RPL36ALQ969Q0 106 aaKnown RBP15.99■□□□□ 0.15
SREBF1-208ENST00000469356 CAMPP49913 170 aa15.98■□□□□ 0.15
SREBF1-208ENST00000469356 LINC00315P59091 139 aa15.98■□□□□ 0.15
SREBF1-208ENST00000469356 UBE2DNLQ8IWF7 75 aa15.97■□□□□ 0.15
SREBF1-208ENST00000469356 LGALS9CQ6DKI2 356 aa15.96■□□□□ 0.15
SREBF1-208ENST00000469356 DNAJC30Q96LL9 226 aa15.96■□□□□ 0.15
SREBF1-208ENST00000469356 SUMO4Q6EEV6 95 aa15.95■□□□□ 0.14
SREBF1-208ENST00000469356 RASL11AQ6T310 242 aa15.95■□□□□ 0.14
SREBF1-208ENST00000469356 TRBV7-3A0A075B6L6 115 aa15.94■□□□□ 0.14
SREBF1-208ENST00000469356 LOC100131303A0A0U1RQF7 123 aa15.94■□□□□ 0.14
SREBF1-208ENST00000469356 A0A1B0GXF2 115 aa15.94■□□□□ 0.14
SREBF1-208ENST00000469356 GAGE12JA6NER3 117 aa15.94■□□□□ 0.14
SREBF1-208ENST00000469356 GAGE1Q13065 139 aa15.94■□□□□ 0.14
SREBF1-208ENST00000469356 GAGE4Q13068 117 aa15.94■□□□□ 0.14
SREBF1-208ENST00000469356 GAGE5Q13069 117 aa15.94■□□□□ 0.14
SREBF1-208ENST00000469356 GAGE13Q4V321 117 aa15.94■□□□□ 0.14
SREBF1-208ENST00000469356 TNFRSF18Q9Y5U5 241 aa15.94■□□□□ 0.14
SREBF1-208ENST00000469356 ATP6V0E2Q8NHE4 81 aa15.94■□□□□ 0.14
SREBF1-208ENST00000469356 ZNRF2Q8NHG8 242 aa15.94■□□□□ 0.14
SREBF1-208ENST00000469356 M0QY20 66 aa15.93■□□□□ 0.14
SREBF1-208ENST00000469356 FAM104BQ5XKR9 115 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms