RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 ZFP2Q6ZN57 461 aa8.05□□□□□ -1.12
COL5A1-207ENST00000469093 SCXQ7RTU7 201 aa8.05□□□□□ -1.12
COL5A1-207ENST00000469093 SUN5Q8TC36 379 aa8.05□□□□□ -1.12
COL5A1-207ENST00000469093 SAMD10Q9BYL1 202 aa8.05□□□□□ -1.12
COL5A1-207ENST00000469093 PARLQ9H300 379 aa8.05□□□□□ -1.12
COL5A1-207ENST00000469093 IGKV3D-20A0A0C4DH25 116 aa8.04□□□□□ -1.12
COL5A1-207ENST00000469093 GGTLC3B5MD39 225 aa8.04□□□□□ -1.12
COL5A1-207ENST00000469093 K7EQM0 130 aa8.04□□□□□ -1.12
COL5A1-207ENST00000469093 FHITP49789 147 aa8.04□□□□□ -1.12
COL5A1-207ENST00000469093 FGF8P55075 233 aaPredicted RBP8.04□□□□□ -1.12
COL5A1-207ENST00000469093 KRTAP10-4P60372 401 aaPredicted RBP8.04□□□□□ -1.12
COL5A1-207ENST00000469093 SUMO1P63165 101 aaKnown RBP8.04□□□□□ -1.12
COL5A1-207ENST00000469093 FLI1Q01543 452 aaPredicted RBP8.04□□□□□ -1.12
COL5A1-207ENST00000469093 ZNF726P1Q15940 193 aa8.04□□□□□ -1.12
COL5A1-207ENST00000469093 SMUG1Q53HV7 270 aa8.04□□□□□ -1.12
COL5A1-207ENST00000469093 TOR2AQ5JU69 321 aa8.04□□□□□ -1.12
COL5A1-207ENST00000469093 PIK3CD-AS1Q5SR53 167 aa8.04□□□□□ -1.12
COL5A1-207ENST00000469093 UFSP1Q6NVU6 142 aa8.04□□□□□ -1.12
COL5A1-207ENST00000469093 PRNTQ86SH4 94 aa8.04□□□□□ -1.12
COL5A1-207ENST00000469093 CYB561D1Q8N8Q1 229 aa8.04□□□□□ -1.12
COL5A1-207ENST00000469093 LINC00479Q96M42 142 aa8.04□□□□□ -1.12
COL5A1-207ENST00000469093 EPDR1Q9UM22 224 aa8.04□□□□□ -1.12
COL5A1-207ENST00000469093 COX11Q9Y6N1 276 aa8.04□□□□□ -1.12
COL5A1-207ENST00000469093 A0A087WWC5 75 aa8.03□□□□□ -1.12
COL5A1-207ENST00000469093 A0A1B0GV50 99 aa8.03□□□□□ -1.12
COL5A1-207ENST00000469093 RBFOX3A6NFN3 312 aa8.03□□□□□ -1.12
COL5A1-207ENST00000469093 A8MWV9 139 aa8.03□□□□□ -1.12
COL5A1-207ENST00000469093 IFNA1P01562 189 aa8.03□□□□□ -1.12
COL5A1-207ENST00000469093 RAB14P61106 215 aa8.03□□□□□ -1.12
COL5A1-207ENST00000469093 SAPCD1Q5SSQ6 148 aa8.03□□□□□ -1.12
COL5A1-207ENST00000469093 TEX261Q6UWH6 196 aa8.03□□□□□ -1.12
COL5A1-207ENST00000469093 C14orf178Q8N769 122 aaPredicted RBP8.03□□□□□ -1.12
COL5A1-207ENST00000469093 MBD3L1Q8WWY6 194 aa8.03□□□□□ -1.12
COL5A1-207ENST00000469093 DNAJC30Q96LL9 226 aa8.03□□□□□ -1.12
COL5A1-207ENST00000469093 JPT2Q9H910 190 aa8.03□□□□□ -1.12
COL5A1-207ENST00000469093 S100A4P26447 101 aaKnown RBP8.02□□□□□ -1.13
COL5A1-207ENST00000469093 SERTAD4-AS1Q5TG53 156 aa8.02□□□□□ -1.13
COL5A1-207ENST00000469093 DMRTA1Q5VZB9 504 aa8.02□□□□□ -1.13
COL5A1-207ENST00000469093 Q8N976 141 aa8.02□□□□□ -1.13
COL5A1-207ENST00000469093 CHAC1Q9BUX1 264 aa8.02□□□□□ -1.13
COL5A1-207ENST00000469093 NKX6-2Q9C056 277 aaPredicted RBP8.02□□□□□ -1.13
COL5A1-207ENST00000469093 DNAH8Q96JB1 4490 aa8.02□□□□□ -1.13
COL5A1-207ENST00000469093 TRAV1-1A0A0B4J248 108 aa8.01□□□□□ -1.13
COL5A1-207ENST00000469093 UBE2G2P60604 165 aa8.01□□□□□ -1.13
COL5A1-207ENST00000469093 CST9LP1Q5W188 147 aa8.01□□□□□ -1.13
COL5A1-207ENST00000469093 NIT1Q86X76 327 aa8.01□□□□□ -1.13
COL5A1-207ENST00000469093 CIRBP-AS1Q8TBR5 109 aa8.01□□□□□ -1.13
COL5A1-207ENST00000469093 RMI2Q96E14 147 aa8.01□□□□□ -1.13
COL5A1-207ENST00000469093 MANBALQ9NQG1 85 aa8.01□□□□□ -1.13
COL5A1-207ENST00000469093 KLK12Q9UKR0 248 aa8.01□□□□□ -1.13
COL5A1-207ENST00000469093 IGKV2D-24A0A075B6R9 120 aa8□□□□□ -1.13
COL5A1-207ENST00000469093 TRAV34A0A0B4J273 112 aa8□□□□□ -1.13
COL5A1-207ENST00000469093 A0A1W2PRE2 83 aa8□□□□□ -1.13
COL5A1-207ENST00000469093 FABP5P3A8MUU1 101 aa8□□□□□ -1.13
COL5A1-207ENST00000469093 TAGLN2P37802 199 aaKnown RBP8□□□□□ -1.13
COL5A1-207ENST00000469093 ASIPP42127 132 aa8□□□□□ -1.13
COL5A1-207ENST00000469093 IL36BQ9NZH7 164 aa8□□□□□ -1.13
COL5A1-207ENST00000469093 GNG13Q9P2W3 67 aa8□□□□□ -1.13
COL5A1-207ENST00000469093 URGCP-MRPS24S4R325 110 aa8□□□□□ -1.13
COL5A1-207ENST00000469093 ARL2-SNX15V9GYD0 113 aa8□□□□□ -1.13
COL5A1-207ENST00000469093 CRIP1P50238 77 aa7.99□□□□□ -1.13
COL5A1-207ENST00000469093 PAGE4O60829 102 aa7.98□□□□□ -1.13
COL5A1-207ENST00000469093 OXTP01178 125 aa7.98□□□□□ -1.13
COL5A1-207ENST00000469093 ARMS2P0C7Q2 107 aa7.98□□□□□ -1.13
COL5A1-207ENST00000469093 DNLZQ5SXM8 178 aa7.98□□□□□ -1.13
COL5A1-207ENST00000469093 ATRAIDQ6UW56 229 aa7.98□□□□□ -1.13
COL5A1-207ENST00000469093 SYT8Q8NBV8 401 aa7.98□□□□□ -1.13
COL5A1-207ENST00000469093 UBE2WQ96B02 151 aa7.98□□□□□ -1.13
COL5A1-207ENST00000469093 TCEAL7Q9BRU2 100 aa7.98□□□□□ -1.13
COL5A1-207ENST00000469093 LRP1Q07954 4544 aaKnown RBP7.97□□□□□ -1.13
COL5A1-207ENST00000469093 FAM74A7A6NL05 159 aa7.97□□□□□ -1.13
COL5A1-207ENST00000469093 B4DEV8 164 aa7.97□□□□□ -1.13
COL5A1-207ENST00000469093 KRBOX1C9JBD0 128 aa7.97□□□□□ -1.13
COL5A1-207ENST00000469093 H3BVH4 76 aa7.97□□□□□ -1.13
COL5A1-207ENST00000469093 RHODO00212 210 aa7.97□□□□□ -1.13
COL5A1-207ENST00000469093 A0A087WWL8 130 aa7.96□□□□□ -1.14
COL5A1-207ENST00000469093 A0A087WX48 190 aa7.96□□□□□ -1.14
COL5A1-207ENST00000469093 GRIFINA4D1Z8 144 aa7.96□□□□□ -1.14
COL5A1-207ENST00000469093 BCL2P10415 239 aa7.96□□□□□ -1.14
COL5A1-207ENST00000469093 AKR1C3P42330 323 aa7.96□□□□□ -1.14
COL5A1-207ENST00000469093 ELOBQ15370 118 aa7.96□□□□□ -1.14
COL5A1-207ENST00000469093 FAM74A4Q5TZK3 123 aa7.96□□□□□ -1.14
COL5A1-207ENST00000469093 SFRP2Q96HF1 295 aa7.96□□□□□ -1.14
COL5A1-207ENST00000469093 CHCHD7Q9BUK0 85 aa7.96□□□□□ -1.14
COL5A1-207ENST00000469093 M0R036 132 aa7.95□□□□□ -1.14
COL5A1-207ENST00000469093 IGLV2-8P01709 118 aa7.95□□□□□ -1.14
COL5A1-207ENST00000469093 CCL20P78556 96 aa7.95□□□□□ -1.14
COL5A1-207ENST00000469093 COX8CQ7Z4L0 72 aa7.95□□□□□ -1.14
COL5A1-207ENST00000469093 HIST1H2BAQ96A08 127 aa7.95□□□□□ -1.14
COL5A1-207ENST00000469093 ZC2HC1AQ96GY0 325 aa7.95□□□□□ -1.14
COL5A1-207ENST00000469093 EIF5A2Q9GZV4 153 aaKnown RBP7.95□□□□□ -1.14
COL5A1-207ENST00000469093 VAX2Q9UIW0 290 aa7.95□□□□□ -1.14
COL5A1-207ENST00000469093 TRBV10-1A0A0K0K1A3 114 aa7.94□□□□□ -1.14
COL5A1-207ENST00000469093 PEX7O00628 323 aa7.94□□□□□ -1.14
COL5A1-207ENST00000469093 PDE6DO43924 150 aa7.94□□□□□ -1.14
COL5A1-207ENST00000469093 UBE2D3P61077 147 aa7.94□□□□□ -1.14
COL5A1-207ENST00000469093 UBE2G1P62253 170 aa7.94□□□□□ -1.14
COL5A1-207ENST00000469093 UBE2D2P62837 147 aa7.94□□□□□ -1.14
COL5A1-207ENST00000469093 MEF2BQ02080 365 aaPredicted RBP7.94□□□□□ -1.14
COL5A1-207ENST00000469093 Q0VG73 95 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms