RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 DYNLT3P51808 116 aa1.81□□□□□ -2.12
LSM5-209ENST00000468872 RPS28P62857 69 aaKnown RBP1.81□□□□□ -2.12
LSM5-209ENST00000468872 SMCO1Q147U7 214 aa1.81□□□□□ -2.12
LSM5-209ENST00000468872 OR8B8Q15620 311 aa1.81□□□□□ -2.12
LSM5-209ENST00000468872 COA5Q86WW8 74 aa1.81□□□□□ -2.12
LSM5-209ENST00000468872 ANGPTL5Q86XS5 388 aa1.81□□□□□ -2.12
LSM5-209ENST00000468872 CCL19Q99731 98 aa1.81□□□□□ -2.12
LSM5-209ENST00000468872 HIST1H2BLQ99880 126 aa1.81□□□□□ -2.12
LSM5-209ENST00000468872 CKLFQ9UBR5 152 aa1.81□□□□□ -2.12
LSM5-209ENST00000468872 LRP1Q07954 4544 aaKnown RBP1.81□□□□□ -2.12
LSM5-209ENST00000468872 HEATR5AQ86XA9 2040 aa1.81□□□□□ -2.12
LSM5-209ENST00000468872 KMT2DO14686 5537 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 CCDC88CQ9P219 2028 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 A0A096LNT2 108 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 A0A1B0GX51 115 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 OR51F1A6NGY5 319 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 GABARAPH6UMI1 98 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 GGCTO75223 188 aaKnown RBP1.8□□□□□ -2.12
LSM5-209ENST00000468872 CXCL1P09341 107 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 BCL2P10415 239 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 NFYAP23511 347 aaPredicted RBP1.8□□□□□ -2.12
LSM5-209ENST00000468872 S100A11P31949 105 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 SRP14P37108 136 aaKnown RBP1.8□□□□□ -2.12
LSM5-209ENST00000468872 FXYD2P54710 66 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 UBE2BP63146 152 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 EIF5AP63241 154 aaKnown RBP1.8□□□□□ -2.12
LSM5-209ENST00000468872 RHOGP84095 191 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 PLCXD2Q0VAA5 305 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 RTL8BQ17RB0 113 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 Q5XG85 94 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 C22orf39Q6P5X5 142 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 Q6ZQT0 140 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 OR4D11Q8NGI4 311 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 OR5A1Q8NGJ0 315 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 BORCS5Q969J3 196 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 BORCS8Q96FH0 119 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 SLC25A21Q9BQT8 299 aaPredicted RBP1.8□□□□□ -2.12
LSM5-209ENST00000468872 EPDR1Q9UM22 224 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 PLIN4Q96Q06 1357 aa1.8□□□□□ -2.12
LSM5-209ENST00000468872 MYH8P13535 1937 aa1.79□□□□□ -2.12
LSM5-209ENST00000468872 TRAV36DV7A0A075B6V5 113 aa1.79□□□□□ -2.12
LSM5-209ENST00000468872 J3KT08 172 aa1.79□□□□□ -2.12
LSM5-209ENST00000468872 DEGS1O15121 323 aa1.79□□□□□ -2.12
LSM5-209ENST00000468872 CTSDP07339 412 aaPredicted RBP1.79□□□□□ -2.12
LSM5-209ENST00000468872 PSG9Q00887 426 aa1.79□□□□□ -2.12
LSM5-209ENST00000468872 MSMO1Q15800 293 aa1.79□□□□□ -2.12
LSM5-209ENST00000468872 NNATQ16517 81 aa1.79□□□□□ -2.12
LSM5-209ENST00000468872 PATE2Q6UY27 113 aa1.79□□□□□ -2.12
LSM5-209ENST00000468872 SOSTDC1Q6X4U4 206 aa1.79□□□□□ -2.12
LSM5-209ENST00000468872 PHF5AQ7RTV0 110 aaKnown RBP1.79□□□□□ -2.12
LSM5-209ENST00000468872 PDZD9Q8IXQ8 264 aa1.79□□□□□ -2.12
LSM5-209ENST00000468872 AQP3Q92482 292 aa1.79□□□□□ -2.12
LSM5-209ENST00000468872 TMEM106AQ96A25 262 aa1.79□□□□□ -2.12
LSM5-209ENST00000468872 FAM107BQ9H098 131 aa1.79□□□□□ -2.12
LSM5-209ENST00000468872 LAMTOR3Q9UHA4 124 aa1.79□□□□□ -2.12
LSM5-209ENST00000468872 TRAPPC2LQ9UL33 140 aa1.79□□□□□ -2.12
LSM5-209ENST00000468872 BAIAP2Q9UQB8 552 aa1.79□□□□□ -2.12
LSM5-209ENST00000468872 DNAJC13O75165 2243 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 SORL1Q92673 2214 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 EML6Q6ZMW3 1958 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 C10orf142B7Z368 130 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 K7ERJ3 54 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 GADD45GO95257 159 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 LY6G6CO95867 125 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 TCL1BO95988 128 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 FAM107AO95990 144 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 COX6A1P12074 109 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 DYNLT1P63172 113 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 KHDC3LQ587J8 217 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 BCL2L15Q5TBC7 163 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 LCN15Q6UWW0 184 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 C9orf163Q8N9P6 203 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 OR4E2Q8NGC2 313 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 YPEL2Q96QA6 119 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 GINS4Q9BRT9 223 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 PRADC1Q9BSG0 188 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 YIPF3Q9GZM5 350 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 TAF9BQ9HBM6 251 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 SPANXA1Q9NS26 97 aa1.78□□□□□ -2.12
LSM5-209ENST00000468872 IGKV1D-42A0A075B6H8 117 aa1.77□□□□□ -2.13
LSM5-209ENST00000468872 TRGV2A0A075B6R0 118 aa1.77□□□□□ -2.13
LSM5-209ENST00000468872 NDUFB3O43676 98 aa1.77□□□□□ -2.13
LSM5-209ENST00000468872 HTR1AP08908 422 aa1.77□□□□□ -2.13
LSM5-209ENST00000468872 GTF2A1P52655 376 aaPredicted RBP1.77□□□□□ -2.13
LSM5-209ENST00000468872 TMEM229BQ8NBD8 167 aa1.77□□□□□ -2.13
LSM5-209ENST00000468872 OR2T10Q8NGZ9 312 aa1.77□□□□□ -2.13
LSM5-209ENST00000468872 ZNF563Q8TA94 476 aa1.77□□□□□ -2.13
LSM5-209ENST00000468872 ISOC1Q96CN7 298 aa1.77□□□□□ -2.13
LSM5-209ENST00000468872 OR2H1Q9GZK4 316 aa1.77□□□□□ -2.13
LSM5-209ENST00000468872 POPDC3Q9HBV1 291 aa1.77□□□□□ -2.13
LSM5-209ENST00000468872 NAT8BQ9UHF3 227 aa1.77□□□□□ -2.13
LSM5-209ENST00000468872 LAMTOR2Q9Y2Q5 125 aa1.77□□□□□ -2.13
LSM5-209ENST00000468872 AHNAK2Q8IVF2 5795 aa1.77□□□□□ -2.13
LSM5-209ENST00000468872 TRGV10A0A0A0MS01 117 aa1.76□□□□□ -2.13
LSM5-209ENST00000468872 TRAV5A0A0B4J249 113 aa1.76□□□□□ -2.13
LSM5-209ENST00000468872 A0A0D9SG52 128 aa1.76□□□□□ -2.13
LSM5-209ENST00000468872 A0A1B0GW64 132 aa1.76□□□□□ -2.13
LSM5-209ENST00000468872 C7orf71A4D174 169 aa1.76□□□□□ -2.13
LSM5-209ENST00000468872 IBA57-AS1B1ANH7 110 aa1.76□□□□□ -2.13
LSM5-209ENST00000468872 M0QZK8 103 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms