RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 KCNRGQ8N5I3 272 aa14.56□□□□□ -0.08
TTC28-204ENST00000468807 LINC00694P0DN24 101 aa14.55□□□□□ -0.08
TTC28-204ENST00000468807 LAGE3Q14657 143 aa14.55□□□□□ -0.08
TTC28-204ENST00000468807 ZNF674Q2M3X9 581 aa14.55□□□□□ -0.08
TTC28-204ENST00000468807 Q8N814 137 aa14.55□□□□□ -0.08
TTC28-204ENST00000468807 TRBV6-1A0A0K0K1D8 114 aa14.54□□□□□ -0.08
TTC28-204ENST00000468807 ZNF345Q14585 488 aa14.54□□□□□ -0.08
TTC28-204ENST00000468807 LINC01559Q495D7 138 aa14.54□□□□□ -0.08
TTC28-204ENST00000468807 NTN5Q8WTR8 489 aaPredicted RBP14.54□□□□□ -0.08
TTC28-204ENST00000468807 TM2D2Q9BX73 214 aa14.54□□□□□ -0.08
TTC28-204ENST00000468807 ZNF471Q9BX82 626 aaPredicted RBP14.54□□□□□ -0.08
TTC28-204ENST00000468807 VPS13BQ7Z7G8 4022 aa14.54□□□□□ -0.08
TTC28-204ENST00000468807 A0A087WWC5 75 aa14.53□□□□□ -0.08
TTC28-204ENST00000468807 KANTRA0A1W2PQU2 76 aa14.53□□□□□ -0.08
TTC28-204ENST00000468807 SEC11BP0C7V7 166 aa14.53□□□□□ -0.08
TTC28-204ENST00000468807 HAMPP81172 84 aa14.53□□□□□ -0.08
TTC28-204ENST00000468807 DAZ4Q86SG3 579 aaKnown RBP14.53□□□□□ -0.08
TTC28-204ENST00000468807 ZFP82Q8N141 532 aa14.53□□□□□ -0.08
TTC28-204ENST00000468807 FRZBQ92765 325 aa14.53□□□□□ -0.08
TTC28-204ENST00000468807 SFRP2Q96HF1 295 aa14.53□□□□□ -0.08
TTC28-204ENST00000468807 DAZ3Q9NR90 486 aaKnown RBP14.53□□□□□ -0.08
TTC28-204ENST00000468807 UMAD1C9J7I0 102 aa14.52□□□□□ -0.09
TTC28-204ENST00000468807 PFDN1O60925 122 aa14.52□□□□□ -0.09
TTC28-204ENST00000468807 Q5VSD8 79 aa14.52□□□□□ -0.09
TTC28-204ENST00000468807 URGCP-MRPS24S4R325 110 aa14.52□□□□□ -0.09
TTC28-204ENST00000468807 DNAH8Q96JB1 4490 aa14.51□□□□□ -0.09
TTC28-204ENST00000468807 SCO2A0A1W2PP80 73 aa14.51□□□□□ -0.09
TTC28-204ENST00000468807 SMR3BP02814 79 aaPredicted RBP14.51□□□□□ -0.09
TTC28-204ENST00000468807 MBD3L1Q8WWY6 194 aa14.51□□□□□ -0.09
TTC28-204ENST00000468807 TRAV8-3A0A0A6YYJ7 113 aa14.5□□□□□ -0.09
TTC28-204ENST00000468807 A0A0D9SG52 128 aa14.5□□□□□ -0.09
TTC28-204ENST00000468807 BCL2L11O43521 198 aa14.5□□□□□ -0.09
TTC28-204ENST00000468807 TOR2AQ5JU69 321 aa14.5□□□□□ -0.09
TTC28-204ENST00000468807 HMSDA8MTL9 139 aa14.49□□□□□ -0.09
TTC28-204ENST00000468807 LECT2O14960 151 aa14.49□□□□□ -0.09
TTC28-204ENST00000468807 S100A9P06702 114 aaKnown RBP14.49□□□□□ -0.09
TTC28-204ENST00000468807 RPL19P84098 196 aaKnown RBP14.49□□□□□ -0.09
TTC28-204ENST00000468807 H2AFB1P0C5Y9 115 aa14.48□□□□□ -0.09
TTC28-204ENST00000468807 PRR27Q6MZM9 219 aa14.48□□□□□ -0.09
TTC28-204ENST00000468807 BAGE2Q86Y30 109 aa14.48□□□□□ -0.09
TTC28-204ENST00000468807 INAFM2P0DMQ5 153 aa14.47□□□□□ -0.09
TTC28-204ENST00000468807 RPL36AP83881 106 aaKnown RBP14.47□□□□□ -0.09
TTC28-204ENST00000468807 WFDC2Q14508 124 aa14.47□□□□□ -0.09
TTC28-204ENST00000468807 RPL36ALQ969Q0 106 aaKnown RBP14.47□□□□□ -0.09
TTC28-204ENST00000468807 EIF5AP63241 154 aaKnown RBP14.46□□□□□ -0.09
TTC28-204ENST00000468807 ZNF56Q15929 161 aa14.46□□□□□ -0.09
TTC28-204ENST00000468807 HERC1Q15751 4861 aa14.46□□□□□ -0.1
TTC28-204ENST00000468807 A0A087WX48 190 aa14.45□□□□□ -0.1
TTC28-204ENST00000468807 TRBV10-1A0A0K0K1A3 114 aa14.45□□□□□ -0.1
TTC28-204ENST00000468807 SSTP61278 116 aa14.45□□□□□ -0.1
TTC28-204ENST00000468807 KCNIP4Q6PIL6 250 aa14.45□□□□□ -0.1
TTC28-204ENST00000468807 NIT1Q86X76 327 aa14.45□□□□□ -0.1
TTC28-204ENST00000468807 OR10AG1Q8NH19 301 aa14.45□□□□□ -0.1
TTC28-204ENST00000468807 TMEM70Q9BUB7 260 aa14.45□□□□□ -0.1
TTC28-204ENST00000468807 KLK12Q9UKR0 248 aa14.45□□□□□ -0.1
TTC28-204ENST00000468807 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.44□□□□□ -0.1
TTC28-204ENST00000468807 MUC21A0A0G2JKD1 596 aa14.44□□□□□ -0.1
TTC28-204ENST00000468807 MUC21A0A140T8X8 626 aa14.44□□□□□ -0.1
TTC28-204ENST00000468807 SRRM2Q9UQ35 2752 aaKnown RBP14.43□□□□□ -0.1
TTC28-204ENST00000468807 TRBV7-3A0A075B6L6 115 aa14.43□□□□□ -0.1
TTC28-204ENST00000468807 IGKV2D-24A0A075B6R9 120 aa14.43□□□□□ -0.1
TTC28-204ENST00000468807 SPANXN1Q5VSR9 72 aa14.43□□□□□ -0.1
TTC28-204ENST00000468807 TMUB2Q71RG4 321 aa14.43□□□□□ -0.1
TTC28-204ENST00000468807 BAALCQ8WXS3 180 aa14.43□□□□□ -0.1
TTC28-204ENST00000468807 RMI2Q96E14 147 aa14.43□□□□□ -0.1
TTC28-204ENST00000468807 MLST8Q9BVC4 326 aa14.43□□□□□ -0.1
TTC28-204ENST00000468807 GNG13Q9P2W3 67 aa14.43□□□□□ -0.1
TTC28-204ENST00000468807 FAM229AH3BQW9 127 aa14.42□□□□□ -0.1
TTC28-204ENST00000468807 RAB4BP61018 213 aa14.42□□□□□ -0.1
TTC28-204ENST00000468807 UBE2D3P61077 147 aa14.42□□□□□ -0.1
TTC28-204ENST00000468807 UBE2D2P62837 147 aa14.42□□□□□ -0.1
TTC28-204ENST00000468807 DNAJC30Q96LL9 226 aa14.42□□□□□ -0.1
TTC28-204ENST00000468807 COX11Q9Y6N1 276 aa14.42□□□□□ -0.1
TTC28-204ENST00000468807 TMEM262E9PQX1 116 aa14.41□□□□□ -0.1
TTC28-204ENST00000468807 CXCL1P09341 107 aa14.41□□□□□ -0.1
TTC28-204ENST00000468807 RPL35P42766 123 aaKnown RBP14.41□□□□□ -0.1
TTC28-204ENST00000468807 UBE2WQ96B02 151 aa14.41□□□□□ -0.1
TTC28-204ENST00000468807 F5H697 171 aa14.4□□□□□ -0.1
TTC28-204ENST00000468807 FAM30AQ9NZY2 134 aa14.4□□□□□ -0.1
TTC28-204ENST00000468807 MYCBP2O75592 4640 aa14.39□□□□□ -0.11
TTC28-204ENST00000468807 CCL20P78556 96 aa14.39□□□□□ -0.11
TTC28-204ENST00000468807 ELOBQ15370 118 aa14.39□□□□□ -0.11
TTC28-204ENST00000468807 MANBALQ9NQG1 85 aa14.39□□□□□ -0.11
TTC28-204ENST00000468807 SNAI2O43623 268 aa14.38□□□□□ -0.11
TTC28-204ENST00000468807 SMIM17P0DL12 118 aa14.38□□□□□ -0.11
TTC28-204ENST00000468807 NEXN-AS1Q8NBZ9 246 aa14.38□□□□□ -0.11
TTC28-204ENST00000468807 OR10G8Q8NGN5 311 aa14.38□□□□□ -0.11
TTC28-204ENST00000468807 CHCHD7Q9BUK0 85 aa14.38□□□□□ -0.11
TTC28-204ENST00000468807 DERL1Q9BUN8 251 aa14.38□□□□□ -0.11
TTC28-204ENST00000468807 TPPP3Q9BW30 176 aa14.38□□□□□ -0.11
TTC28-204ENST00000468807 OR5AL1P0C617 328 aa14.37□□□□□ -0.11
TTC28-204ENST00000468807 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.37□□□□□ -0.11
TTC28-204ENST00000468807 TRBV6-8A0A0A6YYG3 113 aa14.36□□□□□ -0.11
TTC28-204ENST00000468807 RBFOX3A6NFN3 312 aa14.36□□□□□ -0.11
TTC28-204ENST00000468807 CENPWQ5EE01 88 aa14.36□□□□□ -0.11
TTC28-204ENST00000468807 SSBP4Q9BWG4 385 aaPredicted RBP14.36□□□□□ -0.11
TTC28-204ENST00000468807 DMBT1Q9UGM3 2413 aaPredicted RBP14.36□□□□□ -0.11
TTC28-204ENST00000468807 TEX46H3BTG2 121 aa14.35□□□□□ -0.11
TTC28-204ENST00000468807 LINC01620Q4KN68 170 aa14.35□□□□□ -0.11
TTC28-204ENST00000468807 EIF5AL1Q6IS14 154 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms