RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 MRPL16Q9NX20 251 aaKnown RBP11.87□□□□□ -0.51
TSPAN4-211ENST00000468468 AVPP01185 164 aa11.86□□□□□ -0.51
TSPAN4-211ENST00000468468 PRSS29PA6NIE9 313 aa11.86□□□□□ -0.51
TSPAN4-211ENST00000468468 MT-ATP8P03928 68 aa11.86□□□□□ -0.51
TSPAN4-211ENST00000468468 ZNF479Q96JC4 524 aa11.86□□□□□ -0.51
TSPAN4-211ENST00000468468 LRRK2Q5S007 2527 aa11.86□□□□□ -0.51
TSPAN4-211ENST00000468468 TRBV7-3A0A075B6L6 115 aa11.85□□□□□ -0.51
TSPAN4-211ENST00000468468 PPP1R17O96001 155 aa11.85□□□□□ -0.51
TSPAN4-211ENST00000468468 TRBV7-9A0A0J9YWB2 115 aa11.85□□□□□ -0.51
TSPAN4-211ENST00000468468 DAZ1Q9NQZ3 744 aaKnown RBP11.85□□□□□ -0.51
TSPAN4-211ENST00000468468 POLQO75417 2590 aa11.85□□□□□ -0.51
TSPAN4-211ENST00000468468 SPINK8P0C7L1 97 aa11.84□□□□□ -0.51
TSPAN4-211ENST00000468468 EDN2P20800 178 aa11.84□□□□□ -0.51
TSPAN4-211ENST00000468468 PGPEP1Q9NXJ5 209 aa11.84□□□□□ -0.51
TSPAN4-211ENST00000468468 F8W1H4 67 aa11.84□□□□□ -0.51
TSPAN4-211ENST00000468468 EPG5Q9HCE0 2579 aa11.84□□□□□ -0.51
TSPAN4-211ENST00000468468 CENPEQ02224 2701 aa11.84□□□□□ -0.51
TSPAN4-211ENST00000468468 SYT8Q8NBV8 401 aa11.84□□□□□ -0.51
TSPAN4-211ENST00000468468 MAPK1IP1LQ8NDC0 245 aa11.84□□□□□ -0.51
TSPAN4-211ENST00000468468 CYSLTR1Q9Y271 337 aa11.84□□□□□ -0.51
TSPAN4-211ENST00000468468 AGRNO00468 2067 aa11.83□□□□□ -0.51
TSPAN4-211ENST00000468468 IGLV1-40P01703 118 aa11.83□□□□□ -0.52
TSPAN4-211ENST00000468468 LGALS1P09382 135 aaKnown RBP11.83□□□□□ -0.52
TSPAN4-211ENST00000468468 FHL3Q13643 280 aa11.83□□□□□ -0.52
TSPAN4-211ENST00000468468 FAM159AQ6UWV7 190 aa11.83□□□□□ -0.52
TSPAN4-211ENST00000468468 POM121L12Q8N7R1 296 aa11.83□□□□□ -0.52
TSPAN4-211ENST00000468468 PRADC1Q9BSG0 188 aa11.83□□□□□ -0.52
TSPAN4-211ENST00000468468 KIF25-AS1Q9Y6Z4 181 aa11.83□□□□□ -0.52
TSPAN4-211ENST00000468468 LINC01619G3V211 115 aa11.83□□□□□ -0.52
TSPAN4-211ENST00000468468 DUSP14O95147 198 aaKnown RBP11.83□□□□□ -0.52
TSPAN4-211ENST00000468468 NXPH4O95158 308 aa11.83□□□□□ -0.52
TSPAN4-211ENST00000468468 LINC00315P59091 139 aa11.83□□□□□ -0.52
TSPAN4-211ENST00000468468 ZNF418Q8TF45 676 aaPredicted RBP11.83□□□□□ -0.52
TSPAN4-211ENST00000468468 DEFB104AQ8WTQ1 72 aa11.83□□□□□ -0.52
TSPAN4-211ENST00000468468 CDIP1Q9H305 208 aa11.83□□□□□ -0.52
TSPAN4-211ENST00000468468 JPT2Q9H910 190 aa11.83□□□□□ -0.52
TSPAN4-211ENST00000468468 KLLNB2CW77 178 aa11.82□□□□□ -0.52
TSPAN4-211ENST00000468468 B4DSR2 109 aa11.82□□□□□ -0.52
TSPAN4-211ENST00000468468 COX6B1P14854 86 aa11.82□□□□□ -0.52
TSPAN4-211ENST00000468468 UBR5O95071 2799 aaPredicted RBP11.82□□□□□ -0.52
TSPAN4-211ENST00000468468 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.82□□□□□ -0.524e-9■■□□□ 14.3
TSPAN4-211ENST00000468468 ID1P41134 155 aa11.81□□□□□ -0.52
TSPAN4-211ENST00000468468 MUC4Q99102 2169 aa11.81□□□□□ -0.52
TSPAN4-211ENST00000468468 ZNF815PA8K554 130 aa11.8□□□□□ -0.52
TSPAN4-211ENST00000468468 CRYGDP07320 174 aa11.8□□□□□ -0.52
TSPAN4-211ENST00000468468 CD7P09564 240 aa11.8□□□□□ -0.52
TSPAN4-211ENST00000468468 XGP55808 180 aa11.8□□□□□ -0.52
TSPAN4-211ENST00000468468 RRN3P1Q2M238 152 aa11.8□□□□□ -0.52
TSPAN4-211ENST00000468468 PRO0461Q9UI25 63 aa11.8□□□□□ -0.52
TSPAN4-211ENST00000468468 TP53TG1Q9Y2A0 90 aa11.8□□□□□ -0.52
TSPAN4-211ENST00000468468 USP9YO00507 2555 aaPredicted RBP11.8□□□□□ -0.52
TSPAN4-211ENST00000468468 CSPG4Q6UVK1 2322 aa11.8□□□□□ -0.52
TSPAN4-211ENST00000468468 IGHV4OR15-8A0A075B7B6 117 aa11.8□□□□□ -0.52
TSPAN4-211ENST00000468468 A0A087WW49 117 aa11.8□□□□□ -0.52
TSPAN4-211ENST00000468468 A0A087WWL8 130 aa11.8□□□□□ -0.52
TSPAN4-211ENST00000468468 TRAV12-3A0A0B4J271 114 aa11.8□□□□□ -0.52
TSPAN4-211ENST00000468468 A0A1B0GWB2 263 aa11.8□□□□□ -0.52
TSPAN4-211ENST00000468468 GAGE13Q4V321 117 aa11.8□□□□□ -0.52
TSPAN4-211ENST00000468468 SUMO4Q6EEV6 95 aa11.8□□□□□ -0.52
TSPAN4-211ENST00000468468 ANKRD17O75179 2603 aaKnown RBP11.8□□□□□ -0.52
TSPAN4-211ENST00000468468 F5H697 171 aa11.79□□□□□ -0.52
TSPAN4-211ENST00000468468 KRTAP10-9P60411 292 aa11.79□□□□□ -0.52
TSPAN4-211ENST00000468468 DCANP1Q8TF63 244 aa11.79□□□□□ -0.52
TSPAN4-211ENST00000468468 K7EMT4 169 aa11.79□□□□□ -0.52
TSPAN4-211ENST00000468468 APOMO95445 188 aa11.79□□□□□ -0.52
TSPAN4-211ENST00000468468 TSHBP01222 138 aa11.79□□□□□ -0.52
TSPAN4-211ENST00000468468 SCGB1D4Q6XE38 83 aa11.79□□□□□ -0.52
TSPAN4-211ENST00000468468 ZFP2Q6ZN57 461 aa11.79□□□□□ -0.52
TSPAN4-211ENST00000468468 B5MCH6 92 aa11.79□□□□□ -0.52
TSPAN4-211ENST00000468468 HOXA3O43365 443 aaPredicted RBP11.79□□□□□ -0.52
TSPAN4-211ENST00000468468 POLR2KP53803 58 aaKnown RBP11.79□□□□□ -0.52
TSPAN4-211ENST00000468468 EMP1P54849 157 aa11.79□□□□□ -0.52
TSPAN4-211ENST00000468468 DSCR9P59020 149 aa11.79□□□□□ -0.52
TSPAN4-211ENST00000468468 RPL32P62910 135 aaKnown RBP11.79□□□□□ -0.52
TSPAN4-211ENST00000468468 HERV-K104P63124 156 aa11.79□□□□□ -0.52
TSPAN4-211ENST00000468468 CFHR3Q02985 330 aa11.79□□□□□ -0.52
TSPAN4-211ENST00000468468 CUBNO60494 3623 aa11.78□□□□□ -0.52
TSPAN4-211ENST00000468468 PLEKHB2Q96CS7 222 aa11.78□□□□□ -0.52
TSPAN4-211ENST00000468468 ERG28Q9UKR5 140 aa11.78□□□□□ -0.52
TSPAN4-211ENST00000468468 ZANQ9Y493 2812 aa11.78□□□□□ -0.52
TSPAN4-211ENST00000468468 C11orf86A6NJI1 115 aa11.78□□□□□ -0.52
TSPAN4-211ENST00000468468 VCYO14598 125 aa11.78□□□□□ -0.52
TSPAN4-211ENST00000468468 KLHL30-AS1Q8NEE0 82 aa11.78□□□□□ -0.52
TSPAN4-211ENST00000468468 KIR2DL4Q99706 377 aa11.78□□□□□ -0.52
TSPAN4-211ENST00000468468 A0A096LNT2 108 aa11.77□□□□□ -0.53
TSPAN4-211ENST00000468468 IGIPA6NJ69 53 aa11.77□□□□□ -0.53
TSPAN4-211ENST00000468468 RPL39P62891 51 aaKnown RBP11.77□□□□□ -0.53
TSPAN4-211ENST00000468468 IGLV4-69A0A075B6H9 119 aa11.77□□□□□ -0.53
TSPAN4-211ENST00000468468 PTPN13Q12923 2485 aa11.77□□□□□ -0.53
TSPAN4-211ENST00000468468 SRSF9Q13242 221 aaKnown RBP eCLIP11.76□□□□□ -0.53
TSPAN4-211ENST00000468468 PMVKQ15126 192 aa11.76□□□□□ -0.53
TSPAN4-211ENST00000468468 Q6ZUT4 128 aa11.76□□□□□ -0.53
TSPAN4-211ENST00000468468 NFE4Q86UQ8 179 aa11.76□□□□□ -0.53
TSPAN4-211ENST00000468468 SDHAF1A6NFY7 115 aa11.76□□□□□ -0.53
TSPAN4-211ENST00000468468 IGKV3-20P01619 116 aa11.76□□□□□ -0.53
TSPAN4-211ENST00000468468 ZNF688P0C7X2 276 aa11.76□□□□□ -0.53
TSPAN4-211ENST00000468468 FOXI1Q12951 378 aa11.76□□□□□ -0.53
TSPAN4-211ENST00000468468 FAM74A4Q5TZK3 123 aa11.76□□□□□ -0.53
TSPAN4-211ENST00000468468 MORN3Q6PF18 240 aaPredicted RBP11.76□□□□□ -0.53
TSPAN4-211ENST00000468468 LINC01549A6NIU2 74 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 877 ms