RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 SCRT2Q9NQ03 307 aa7.63□□□□□ -1.19
COL4A6-205ENST00000468338 TRBV6-4A0A1B0GX49 114 aa7.62□□□□□ -1.19
COL4A6-205ENST00000468338 B4DEV8 164 aa7.62□□□□□ -1.19
COL4A6-205ENST00000468338 ASIPP42127 132 aa7.62□□□□□ -1.19
COL4A6-205ENST00000468338 TTC32Q5I0X7 151 aa7.62□□□□□ -1.19
COL4A6-205ENST00000468338 MANBALQ9NQG1 85 aa7.62□□□□□ -1.19
COL4A6-205ENST00000468338 PKHD1P08F94 4074 aa7.61□□□□□ -1.19
COL4A6-205ENST00000468338 A8MWV9 139 aa7.61□□□□□ -1.19
COL4A6-205ENST00000468338 PRYO14603 147 aa7.61□□□□□ -1.19
COL4A6-205ENST00000468338 SIVA1O15304 175 aa7.61□□□□□ -1.19
COL4A6-205ENST00000468338 NXPH4O95158 308 aa7.61□□□□□ -1.19
COL4A6-205ENST00000468338 S100A4P26447 101 aaKnown RBP7.61□□□□□ -1.19
COL4A6-205ENST00000468338 SRIP30626 198 aa7.61□□□□□ -1.19
COL4A6-205ENST00000468338 KRTAP19-4Q3LI73 84 aa7.61□□□□□ -1.19
COL4A6-205ENST00000468338 UFSP1Q6NVU6 142 aa7.61□□□□□ -1.19
COL4A6-205ENST00000468338 ZFP2Q6ZN57 461 aa7.61□□□□□ -1.19
COL4A6-205ENST00000468338 SH2D6Q7Z4S9 175 aa7.61□□□□□ -1.19
COL4A6-205ENST00000468338 BAGE2Q86Y30 109 aa7.61□□□□□ -1.19
COL4A6-205ENST00000468338 SLC25A29Q8N8R3 303 aa7.61□□□□□ -1.19
COL4A6-205ENST00000468338 PARLQ9H300 379 aa7.61□□□□□ -1.19
COL4A6-205ENST00000468338 KIAA1109Q2LD37 5005 aa7.6□□□□□ -1.19
COL4A6-205ENST00000468338 LOC100131303A0A0U1RQF7 123 aa7.6□□□□□ -1.19
COL4A6-205ENST00000468338 TEX46H3BTG2 121 aa7.6□□□□□ -1.19
COL4A6-205ENST00000468338 H3BVH4 76 aa7.6□□□□□ -1.19
COL4A6-205ENST00000468338 M0R036 132 aa7.6□□□□□ -1.19
COL4A6-205ENST00000468338 CXCL1P09341 107 aa7.6□□□□□ -1.19
COL4A6-205ENST00000468338 ARMS2P0C7Q2 107 aa7.6□□□□□ -1.19
COL4A6-205ENST00000468338 MGST1P10620 155 aaKnown RBP7.6□□□□□ -1.19
COL4A6-205ENST00000468338 PCNPQ8WW12 178 aaKnown RBP7.6□□□□□ -1.19
COL4A6-205ENST00000468338 GNG13Q9P2W3 67 aa7.6□□□□□ -1.19
COL4A6-205ENST00000468338 GRIFINA4D1Z8 144 aa7.59□□□□□ -1.19
COL4A6-205ENST00000468338 RPL35P42766 123 aaKnown RBP7.59□□□□□ -1.19
COL4A6-205ENST00000468338 RHOHQ15669 191 aa7.59□□□□□ -1.19
COL4A6-205ENST00000468338 NHLRC2Q8NBF2 726 aa7.59□□□□□ -1.19
COL4A6-205ENST00000468338 DERL1Q9BUN8 251 aa7.59□□□□□ -1.19
COL4A6-205ENST00000468338 IGHV3-73A0A0B4J1V6 119 aa7.58□□□□□ -1.2
COL4A6-205ENST00000468338 K7EP13 123 aa7.58□□□□□ -1.2
COL4A6-205ENST00000468338 IGLV2-8P01709 118 aa7.58□□□□□ -1.2
COL4A6-205ENST00000468338 DNAH10OSP0CZ25 163 aa7.58□□□□□ -1.2
COL4A6-205ENST00000468338 LINC00694P0DN24 101 aa7.58□□□□□ -1.2
COL4A6-205ENST00000468338 MEF2BQ02080 365 aaPredicted RBP7.58□□□□□ -1.2
COL4A6-205ENST00000468338 Q6ZRN7 208 aaPredicted RBP7.58□□□□□ -1.2
COL4A6-205ENST00000468338 DAZAP1Q96EP5 407 aaKnown RBP7.58□□□□□ -1.2
COL4A6-205ENST00000468338 PRADC1Q9BSG0 188 aa7.58□□□□□ -1.2
COL4A6-205ENST00000468338 SAMD10Q9BYL1 202 aa7.58□□□□□ -1.2
COL4A6-205ENST00000468338 JPT2Q9H910 190 aa7.58□□□□□ -1.2
COL4A6-205ENST00000468338 TMSB15BA0A087X1C1 80 aa7.57□□□□□ -1.2
COL4A6-205ENST00000468338 A0A1B0GVG6 124 aa7.57□□□□□ -1.2
COL4A6-205ENST00000468338 PDE6DO43924 150 aa7.57□□□□□ -1.2
COL4A6-205ENST00000468338 CRYGDP07320 174 aa7.57□□□□□ -1.2
COL4A6-205ENST00000468338 BCL2P10415 239 aa7.57□□□□□ -1.2
COL4A6-205ENST00000468338 LYPD6BQ8NI32 183 aa7.57□□□□□ -1.2
COL4A6-205ENST00000468338 SMIM12Q96EX1 92 aa7.57□□□□□ -1.2
COL4A6-205ENST00000468338 SFRP2Q96HF1 295 aa7.57□□□□□ -1.2
COL4A6-205ENST00000468338 PHLDA3Q9Y5J5 127 aa7.57□□□□□ -1.2
COL4A6-205ENST00000468338 HERC2O95714 4834 aa7.57□□□□□ -1.2
COL4A6-205ENST00000468338 TRBV20OR9-2A0A075B6H5 130 aa7.56□□□□□ -1.2
COL4A6-205ENST00000468338 RHODO00212 210 aa7.56□□□□□ -1.2
COL4A6-205ENST00000468338 SNAI2O43623 268 aa7.56□□□□□ -1.2
COL4A6-205ENST00000468338 IFNA1P01562 189 aa7.56□□□□□ -1.2
COL4A6-205ENST00000468338 TAGLN2P37802 199 aaKnown RBP7.56□□□□□ -1.2
COL4A6-205ENST00000468338 LINC00315P59091 139 aa7.56□□□□□ -1.2
COL4A6-205ENST00000468338 RPL19P84098 196 aaKnown RBP7.56□□□□□ -1.2
COL4A6-205ENST00000468338 WFDC10BQ8IUB3 73 aa7.56□□□□□ -1.2
COL4A6-205ENST00000468338 ZFP82Q8N141 532 aa7.56□□□□□ -1.2
COL4A6-205ENST00000468338 Q9UF83 564 aa7.56□□□□□ -1.2
COL4A6-205ENST00000468338 VAX2Q9UIW0 290 aa7.56□□□□□ -1.2
COL4A6-205ENST00000468338 C19orf71A6NCJ1 209 aa7.55□□□□□ -1.2
COL4A6-205ENST00000468338 OR5AL1P0C617 328 aa7.55□□□□□ -1.2
COL4A6-205ENST00000468338 CENPWQ5EE01 88 aa7.55□□□□□ -1.2
COL4A6-205ENST00000468338 GTSF1LQ9H1H1 148 aa7.55□□□□□ -1.2
COL4A6-205ENST00000468338 LY96Q9Y6Y9 160 aa7.55□□□□□ -1.2
COL4A6-205ENST00000468338 LRP1BQ9NZR2 4599 aa7.55□□□□□ -1.2
COL4A6-205ENST00000468338 TRAV9-2A0A087WT02 112 aa7.54□□□□□ -1.2
COL4A6-205ENST00000468338 RAB19A4D1S5 217 aa7.54□□□□□ -1.2
COL4A6-205ENST00000468338 M0R381 172 aa7.54□□□□□ -1.2
COL4A6-205ENST00000468338 LELP1Q5T871 98 aa7.54□□□□□ -1.2
COL4A6-205ENST00000468338 ALKAL2Q6UX46 152 aa7.54□□□□□ -1.2
COL4A6-205ENST00000468338 C14orf178Q8N769 122 aaPredicted RBP7.54□□□□□ -1.2
COL4A6-205ENST00000468338 ATP6V0E2Q8NHE4 81 aa7.54□□□□□ -1.2
COL4A6-205ENST00000468338 IGHV3-38A0A0C4DH36 116 aa7.53□□□□□ -1.2
COL4A6-205ENST00000468338 IGLC6P0CF74 106 aa7.53□□□□□ -1.2
COL4A6-205ENST00000468338 EVI2AP22794 236 aa7.53□□□□□ -1.2
COL4A6-205ENST00000468338 GNG4P50150 75 aa7.53□□□□□ -1.2
COL4A6-205ENST00000468338 LINC01556Q5JQF7 62 aa7.53□□□□□ -1.2
COL4A6-205ENST00000468338 PRR27Q6MZM9 219 aa7.53□□□□□ -1.2
COL4A6-205ENST00000468338 OR10AG1Q8NH19 301 aa7.53□□□□□ -1.2
COL4A6-205ENST00000468338 MED9Q9NWA0 146 aa7.53□□□□□ -1.2
COL4A6-205ENST00000468338 TNFRSF18Q9Y5U5 241 aa7.53□□□□□ -1.2
COL4A6-205ENST00000468338 DNAH5Q8TE73 4624 aa7.52□□□□□ -1.21
COL4A6-205ENST00000468338 TRBV10-1A0A0K0K1A3 114 aa7.52□□□□□ -1.21
COL4A6-205ENST00000468338 NKX2-5P52952 324 aaPredicted RBP7.52□□□□□ -1.21
COL4A6-205ENST00000468338 C10orf126Q8N4M7 172 aa7.52□□□□□ -1.21
COL4A6-205ENST00000468338 KIF25-AS1Q9Y6Z4 181 aa7.52□□□□□ -1.21
COL4A6-205ENST00000468338 TRAV8-6A0A0B4J262 113 aa7.51□□□□□ -1.21
COL4A6-205ENST00000468338 GAGE12JA6NER3 117 aa7.51□□□□□ -1.21
COL4A6-205ENST00000468338 TMEM250H0YL14 139 aa7.51□□□□□ -1.21
COL4A6-205ENST00000468338 NDUFS6O75380 124 aaKnown RBP7.51□□□□□ -1.21
COL4A6-205ENST00000468338 RPS20P60866 119 aaKnown RBP7.51□□□□□ -1.21
COL4A6-205ENST00000468338 RAB4BP61018 213 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms