RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 TMEM219Q86XT9 240 aa13.75□□□□□ -0.21
SNAPC3-205ENST00000467062 A0A0J9YY99 117 aa13.74□□□□□ -0.21
SNAPC3-205ENST00000467062 ATP6V0E1O15342 81 aa13.74□□□□□ -0.21
SNAPC3-205ENST00000467062 ORMDL2Q53FV1 153 aa13.74□□□□□ -0.21
SNAPC3-205ENST00000467062 LINC01600Q96MT4 127 aa13.74□□□□□ -0.21
SNAPC3-205ENST00000467062 PIEZO1Q92508 2521 aa13.74□□□□□ -0.21
SNAPC3-205ENST00000467062 CRIP2P52943 208 aaPredicted RBP13.74□□□□□ -0.21
SNAPC3-205ENST00000467062 IL17RELQ6ZVW7 336 aa13.74□□□□□ -0.21
SNAPC3-205ENST00000467062 DUSP14O95147 198 aaKnown RBP13.73□□□□□ -0.21
SNAPC3-205ENST00000467062 IGHV3-30P01768 117 aa13.73□□□□□ -0.21
SNAPC3-205ENST00000467062 IGHV3-30-5P0DP03 117 aa13.73□□□□□ -0.21
SNAPC3-205ENST00000467062 TRPT1Q86TN4 253 aaKnown RBP13.73□□□□□ -0.21
SNAPC3-205ENST00000467062 TOMM6Q96B49 74 aa13.73□□□□□ -0.21
SNAPC3-205ENST00000467062 GNLYP22749 145 aa13.73□□□□□ -0.21
SNAPC3-205ENST00000467062 RNF182Q8N6D2 247 aa13.73□□□□□ -0.21
SNAPC3-205ENST00000467062 P0DMU3 169 aa13.72□□□□□ -0.21
SNAPC3-205ENST00000467062 FAM231AP0DMU4 169 aa13.72□□□□□ -0.21
SNAPC3-205ENST00000467062 FAM231CP0DMU5 169 aa13.72□□□□□ -0.21
SNAPC3-205ENST00000467062 ATXN8Q156A1 80 aa13.72□□□□□ -0.21
SNAPC3-205ENST00000467062 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.72□□□□□ -0.212e-7■■■□□ 18.1
SNAPC3-205ENST00000467062 CHCHD5Q9BSY4 110 aa13.72□□□□□ -0.21
SNAPC3-205ENST00000467062 HERVK_113P61574 105 aa13.72□□□□□ -0.21
SNAPC3-205ENST00000467062 LMO4P61968 165 aa13.72□□□□□ -0.21
SNAPC3-205ENST00000467062 ERCC8Q13216 396 aa13.71□□□□□ -0.21
SNAPC3-205ENST00000467062 EBI3Q14213 229 aa13.71□□□□□ -0.21
SNAPC3-205ENST00000467062 MINOS1Q5TGZ0 78 aa13.71□□□□□ -0.21
SNAPC3-205ENST00000467062 CLEC19AQ6UXS0 136 aa13.71□□□□□ -0.21
SNAPC3-205ENST00000467062 KLHL30-AS1Q8NEE0 82 aa13.71□□□□□ -0.21
SNAPC3-205ENST00000467062 MINOS1-NBL1R4GNA1 71 aa13.71□□□□□ -0.21
SNAPC3-205ENST00000467062 PRAC2D3DTV9 90 aa13.71□□□□□ -0.22
SNAPC3-205ENST00000467062 H3BMM0 161 aa13.71□□□□□ -0.22
SNAPC3-205ENST00000467062 LGALS9O00182 355 aa13.71□□□□□ -0.22
SNAPC3-205ENST00000467062 UBE2WQ96B02 151 aa13.71□□□□□ -0.22
SNAPC3-205ENST00000467062 PSMG3-AS1Q96PY0 264 aa13.71□□□□□ -0.22
SNAPC3-205ENST00000467062 SMIM2Q9BVW6 85 aa13.71□□□□□ -0.22
SNAPC3-205ENST00000467062 LINC01620Q4KN68 170 aa13.7□□□□□ -0.22
SNAPC3-205ENST00000467062 BRD3OSQ6XYD6 125 aa13.7□□□□□ -0.22
SNAPC3-205ENST00000467062 KLK15Q9H2R5 256 aa13.7□□□□□ -0.22
SNAPC3-205ENST00000467062 TEX49A0A1B0GTD5 131 aa13.7□□□□□ -0.22
SNAPC3-205ENST00000467062 TRGV3P03979 118 aa13.7□□□□□ -0.22
SNAPC3-205ENST00000467062 UBE2E1P51965 193 aa13.7□□□□□ -0.22
SNAPC3-205ENST00000467062 SLC25A29Q8N8R3 303 aa13.7□□□□□ -0.22
SNAPC3-205ENST00000467062 ITLN2Q8WWU7 325 aaPredicted RBP13.7□□□□□ -0.22
SNAPC3-205ENST00000467062 BAALCQ8WXS3 180 aa13.7□□□□□ -0.22
SNAPC3-205ENST00000467062 USP9XQ93008 2570 aaPredicted RBP13.7□□□□□ -0.22
SNAPC3-205ENST00000467062 CACNA1AO00555 2505 aa13.69□□□□□ -0.22
SNAPC3-205ENST00000467062 TRAV26-2A0A0B4J265 109 aa13.69□□□□□ -0.22
SNAPC3-205ENST00000467062 RPL7P18124 248 aaKnown RBP13.69□□□□□ -0.22
SNAPC3-205ENST00000467062 LINC00694P0DN24 101 aa13.69□□□□□ -0.22
SNAPC3-205ENST00000467062 C3orf56Q8N813 242 aa13.69□□□□□ -0.22
SNAPC3-205ENST00000467062 MYO18BQ8IUG5 2567 aa13.68□□□□□ -0.22
SNAPC3-205ENST00000467062 ZFYVE26Q68DK2 2539 aa13.68□□□□□ -0.22
SNAPC3-205ENST00000467062 TRBV10-2A0A0K0K1G8 114 aa13.68□□□□□ -0.22
SNAPC3-205ENST00000467062 IGHV3-33P01772 117 aa13.68□□□□□ -0.22
SNAPC3-205ENST00000467062 PAPPA-AS1Q5QFB9 102 aa13.68□□□□□ -0.22
SNAPC3-205ENST00000467062 SPANXDQ9BXN6 97 aa13.67□□□□□ -0.22
SNAPC3-205ENST00000467062 ABCA2Q9BZC7 2435 aa13.67□□□□□ -0.22
SNAPC3-205ENST00000467062 POLQO75417 2590 aa13.67□□□□□ -0.22
SNAPC3-205ENST00000467062 CSPG4Q6UVK1 2322 aa13.67□□□□□ -0.22
SNAPC3-205ENST00000467062 TRBV7-7A0A0K0K1E9 115 aa13.67□□□□□ -0.22
SNAPC3-205ENST00000467062 OOSP1A8MZH6 123 aa13.67□□□□□ -0.22
SNAPC3-205ENST00000467062 M0R2P5 195 aa13.67□□□□□ -0.22
SNAPC3-205ENST00000467062 CCDC140Q96MF4 163 aa13.67□□□□□ -0.22
SNAPC3-205ENST00000467062 SMIM9A6NGZ8 99 aa13.66□□□□□ -0.22
SNAPC3-205ENST00000467062 ZNF56Q15929 161 aa13.66□□□□□ -0.22
SNAPC3-205ENST00000467062 IGSF10Q6WRI0 2623 aa13.66□□□□□ -0.22
SNAPC3-205ENST00000467062 FAM240AA0A1B0GVK7 77 aa13.66□□□□□ -0.22
SNAPC3-205ENST00000467062 ZANQ9Y493 2812 aa13.65□□□□□ -0.22
SNAPC3-205ENST00000467062 NPFFO15130 113 aa13.65□□□□□ -0.22
SNAPC3-205ENST00000467062 IGHV4-39P01824 125 aa13.65□□□□□ -0.22
SNAPC3-205ENST00000467062 LRRC75A-AS1Q8N1F1 130 aa13.65□□□□□ -0.22
SNAPC3-205ENST00000467062 USP9YO00507 2555 aaPredicted RBP13.65□□□□□ -0.22
SNAPC3-205ENST00000467062 Q6ZS46 218 aa13.65□□□□□ -0.22
SNAPC3-205ENST00000467062 TMEM101Q96IK0 257 aa13.65□□□□□ -0.22
SNAPC3-205ENST00000467062 BUB3O43684 328 aa13.64□□□□□ -0.23
SNAPC3-205ENST00000467062 C9orf153Q5TBE3 101 aa13.64□□□□□ -0.23
SNAPC3-205ENST00000467062 C2orf66Q6UXQ4 117 aa13.64□□□□□ -0.23
SNAPC3-205ENST00000467062 FAM110DQ8TAY7 271 aaPredicted RBP13.64□□□□□ -0.23
SNAPC3-205ENST00000467062 ZFAND3Q9H8U3 227 aa13.64□□□□□ -0.23
SNAPC3-205ENST00000467062 A0A0B4J2C4 111 aa13.64□□□□□ -0.23
SNAPC3-205ENST00000467062 WIPF1O43516 503 aa13.64□□□□□ -0.23
SNAPC3-205ENST00000467062 SLC50A1Q9BRV3 221 aa13.64□□□□□ -0.23
SNAPC3-205ENST00000467062 CLPSL1A2RUU4 121 aa13.63□□□□□ -0.23
SNAPC3-205ENST00000467062 J3KT08 172 aa13.63□□□□□ -0.23
SNAPC3-205ENST00000467062 NDUFA7O95182 113 aa13.63□□□□□ -0.23
SNAPC3-205ENST00000467062 TMEM263Q8WUH6 116 aaKnown RBP13.63□□□□□ -0.23
SNAPC3-205ENST00000467062 A4D1N5 150 aa13.63□□□□□ -0.23
SNAPC3-205ENST00000467062 CUBNO60494 3623 aa13.63□□□□□ -0.23
SNAPC3-205ENST00000467062 ACACBO00763 2458 aa13.62□□□□□ -0.23
SNAPC3-205ENST00000467062 LY6EQ16553 131 aa13.62□□□□□ -0.23
SNAPC3-205ENST00000467062 Q1RN00 199 aa13.62□□□□□ -0.23
SNAPC3-205ENST00000467062 C2orf82Q6UX34 121 aa13.62□□□□□ -0.23
SNAPC3-205ENST00000467062 H7C2G1 150 aa13.62□□□□□ -0.23
SNAPC3-205ENST00000467062 EMP1P54849 157 aa13.62□□□□□ -0.23
SNAPC3-205ENST00000467062 SUMO2P61956 95 aaKnown RBP13.62□□□□□ -0.23
SNAPC3-205ENST00000467062 SPANXN1Q5VSR9 72 aa13.62□□□□□ -0.23
SNAPC3-205ENST00000467062 C3orf22Q8N5N4 141 aa13.62□□□□□ -0.23
SNAPC3-205ENST00000467062 IMUPQ9GZP8 106 aa13.62□□□□□ -0.23
SNAPC3-205ENST00000467062 IGKV3D-20A0A0C4DH25 116 aa13.61□□□□□ -0.23
SNAPC3-205ENST00000467062 SPANXCQ9NY87 97 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms