RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 C14orf178Q8N769 122 aaPredicted RBP11.73□□□□□ -0.53
COL7A1-206ENST00000466591 SAMD10Q9BYL1 202 aa11.73□□□□□ -0.53
COL7A1-206ENST00000466591 A0A087WX48 190 aa11.72□□□□□ -0.53
COL7A1-206ENST00000466591 HAMPP81172 84 aa11.72□□□□□ -0.53
COL7A1-206ENST00000466591 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.72□□□□□ -0.53
COL7A1-206ENST00000466591 FAM213BQ8TBF2 198 aa11.72□□□□□ -0.53
COL7A1-206ENST00000466591 SFT2D1Q8WV19 159 aa11.72□□□□□ -0.53
COL7A1-206ENST00000466591 KANTRA0A1W2PQU2 76 aa11.71□□□□□ -0.53
COL7A1-206ENST00000466591 LRCOL1A6NCL2 159 aa11.71□□□□□ -0.53
COL7A1-206ENST00000466591 FHITP49789 147 aa11.71□□□□□ -0.53
COL7A1-206ENST00000466591 RPL36AP83881 106 aaKnown RBP11.71□□□□□ -0.53
COL7A1-206ENST00000466591 DAZ4Q86SG3 579 aaKnown RBP11.71□□□□□ -0.53
COL7A1-206ENST00000466591 RPL36ALQ969Q0 106 aaKnown RBP11.71□□□□□ -0.53
COL7A1-206ENST00000466591 TMEM70Q9BUB7 260 aa11.71□□□□□ -0.53
COL7A1-206ENST00000466591 DAZ3Q9NR90 486 aaKnown RBP11.71□□□□□ -0.53
COL7A1-206ENST00000466591 COX11Q9Y6N1 276 aa11.71□□□□□ -0.53
COL7A1-206ENST00000466591 SMLR1H3BR10 107 aa11.7□□□□□ -0.54
COL7A1-206ENST00000466591 LECT2O14960 151 aa11.7□□□□□ -0.54
COL7A1-206ENST00000466591 PAGE4O60829 102 aa11.7□□□□□ -0.54
COL7A1-206ENST00000466591 S100A9P06702 114 aaKnown RBP11.7□□□□□ -0.54
COL7A1-206ENST00000466591 CRIP1P50238 77 aa11.7□□□□□ -0.54
COL7A1-206ENST00000466591 ZNF471Q9BX82 626 aaPredicted RBP11.7□□□□□ -0.54
COL7A1-206ENST00000466591 IGKV2D-24A0A075B6R9 120 aa11.69□□□□□ -0.54
COL7A1-206ENST00000466591 UMAD1C9J7I0 102 aa11.69□□□□□ -0.54
COL7A1-206ENST00000466591 LTAP01374 205 aa11.69□□□□□ -0.54
COL7A1-206ENST00000466591 ELOBQ15370 118 aa11.69□□□□□ -0.54
COL7A1-206ENST00000466591 ZNF56Q15929 161 aa11.69□□□□□ -0.54
COL7A1-206ENST00000466591 LINC01559Q495D7 138 aa11.69□□□□□ -0.54
COL7A1-206ENST00000466591 DNLZQ5SXM8 178 aa11.69□□□□□ -0.54
COL7A1-206ENST00000466591 Q8N3U1 123 aa11.69□□□□□ -0.54
COL7A1-206ENST00000466591 SFRP2Q96HF1 295 aa11.69□□□□□ -0.54
COL7A1-206ENST00000466591 CYTL1Q9NRR1 136 aa11.69□□□□□ -0.54
COL7A1-206ENST00000466591 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.68□□□□□ -0.54
COL7A1-206ENST00000466591 TMEM262E9PQX1 116 aa11.68□□□□□ -0.54
COL7A1-206ENST00000466591 EIF5AP63241 154 aaKnown RBP11.68□□□□□ -0.54
COL7A1-206ENST00000466591 ZNF674Q2M3X9 581 aa11.68□□□□□ -0.54
COL7A1-206ENST00000466591 TRBV6-1A0A0K0K1D8 114 aa11.67□□□□□ -0.54
COL7A1-206ENST00000466591 LINC00694P0DN24 101 aa11.67□□□□□ -0.54
COL7A1-206ENST00000466591 PRR27Q6MZM9 219 aa11.67□□□□□ -0.54
COL7A1-206ENST00000466591 KLK12Q9UKR0 248 aa11.67□□□□□ -0.54
COL7A1-206ENST00000466591 A0A0D9SG52 128 aa11.66□□□□□ -0.54
COL7A1-206ENST00000466591 TRBV10-1A0A0K0K1A3 114 aa11.66□□□□□ -0.54
COL7A1-206ENST00000466591 SSTP61278 116 aa11.66□□□□□ -0.54
COL7A1-206ENST00000466591 ZNF345Q14585 488 aa11.66□□□□□ -0.54
COL7A1-206ENST00000466591 SPANXN1Q5VSR9 72 aa11.66□□□□□ -0.54
COL7A1-206ENST00000466591 UFSP1Q6NVU6 142 aa11.66□□□□□ -0.54
COL7A1-206ENST00000466591 COX8CQ7Z4L0 72 aa11.66□□□□□ -0.54
COL7A1-206ENST00000466591 BAGE2Q86Y30 109 aa11.66□□□□□ -0.54
COL7A1-206ENST00000466591 KCNRGQ8N5I3 272 aa11.66□□□□□ -0.54
COL7A1-206ENST00000466591 UBE2WQ96B02 151 aa11.66□□□□□ -0.54
COL7A1-206ENST00000466591 TRBV7-3A0A075B6L6 115 aa11.65□□□□□ -0.54
COL7A1-206ENST00000466591 SCO2A0A1W2PP80 73 aa11.65□□□□□ -0.54
COL7A1-206ENST00000466591 RBFOX3A6NFN3 312 aa11.65□□□□□ -0.54
COL7A1-206ENST00000466591 F5H697 171 aa11.65□□□□□ -0.54
COL7A1-206ENST00000466591 G3V3Q6 166 aa11.65□□□□□ -0.54
COL7A1-206ENST00000466591 CRPP02741 224 aa11.65□□□□□ -0.54
COL7A1-206ENST00000466591 H2AFB1P0C5Y9 115 aa11.65□□□□□ -0.54
COL7A1-206ENST00000466591 SMIM17P0DL12 118 aa11.65□□□□□ -0.54
COL7A1-206ENST00000466591 BAALCQ8WXS3 180 aa11.65□□□□□ -0.54
COL7A1-206ENST00000466591 Q9UF83 564 aa11.65□□□□□ -0.54
COL7A1-206ENST00000466591 NIT1Q86X76 327 aa11.64□□□□□ -0.55
COL7A1-206ENST00000466591 TEX46H3BTG2 121 aa11.63□□□□□ -0.55
COL7A1-206ENST00000466591 BCL2L11O43521 198 aa11.63□□□□□ -0.55
COL7A1-206ENST00000466591 RAB4BP61018 213 aa11.63□□□□□ -0.55
COL7A1-206ENST00000466591 RPL19P84098 196 aaKnown RBP11.63□□□□□ -0.55
COL7A1-206ENST00000466591 Q8N976 141 aa11.63□□□□□ -0.55
COL7A1-206ENST00000466591 Q0VG73 95 aa11.62□□□□□ -0.55
COL7A1-206ENST00000466591 MBD3L1Q8WWY6 194 aa11.62□□□□□ -0.55
COL7A1-206ENST00000466591 CHCHD7Q9BUK0 85 aa11.62□□□□□ -0.55
COL7A1-206ENST00000466591 MUC21A0A0G2JKD1 596 aa11.61□□□□□ -0.55
COL7A1-206ENST00000466591 MUC21A0A140T8X8 626 aa11.61□□□□□ -0.55
COL7A1-206ENST00000466591 HMSDA8MTL9 139 aa11.61□□□□□ -0.55
COL7A1-206ENST00000466591 C1QBP02746 253 aa11.61□□□□□ -0.55
COL7A1-206ENST00000466591 UBE2D3P61077 147 aa11.61□□□□□ -0.55
COL7A1-206ENST00000466591 UBE2D2P62837 147 aa11.61□□□□□ -0.55
COL7A1-206ENST00000466591 WFDC2Q14508 124 aa11.61□□□□□ -0.55
COL7A1-206ENST00000466591 OR10AG1Q8NH19 301 aa11.61□□□□□ -0.55
COL7A1-206ENST00000466591 DAZAP1Q96EP5 407 aaKnown RBP11.61□□□□□ -0.55
COL7A1-206ENST00000466591 CHCHD5Q9BSY4 110 aa11.61□□□□□ -0.55
COL7A1-206ENST00000466591 TPPP3Q9BW30 176 aa11.61□□□□□ -0.55
COL7A1-206ENST00000466591 C1orf43Q9BWL3 253 aa11.61□□□□□ -0.55
COL7A1-206ENST00000466591 PLA2G1BP04054 148 aaKnown RBP11.6□□□□□ -0.55
COL7A1-206ENST00000466591 PKIAP61925 76 aa11.6□□□□□ -0.55
COL7A1-206ENST00000466591 TMUB2Q71RG4 321 aa11.6□□□□□ -0.55
COL7A1-206ENST00000466591 GNG13Q9P2W3 67 aa11.6□□□□□ -0.55
COL7A1-206ENST00000466591 CXCL1P09341 107 aa11.59□□□□□ -0.55
COL7A1-206ENST00000466591 EIF5AL1Q6IS14 154 aaKnown RBP11.59□□□□□ -0.55
COL7A1-206ENST00000466591 C15orf54Q8N8G6 183 aa11.59□□□□□ -0.55
COL7A1-206ENST00000466591 AP1S3Q96PC3 154 aa11.59□□□□□ -0.55
COL7A1-206ENST00000466591 MANBALQ9NQG1 85 aa11.59□□□□□ -0.55
COL7A1-206ENST00000466591 TRBV6-8A0A0A6YYG3 113 aa11.58□□□□□ -0.56
COL7A1-206ENST00000466591 ANGP03950 147 aaKnown RBP11.58□□□□□ -0.56
COL7A1-206ENST00000466591 RPL35P42766 123 aaKnown RBP11.58□□□□□ -0.56
COL7A1-206ENST00000466591 C14orf177Q52M58 125 aa11.58□□□□□ -0.56
COL7A1-206ENST00000466591 FAM30AQ9NZY2 134 aa11.58□□□□□ -0.56
COL7A1-206ENST00000466591 J3QL48 77 aa11.57□□□□□ -0.56
COL7A1-206ENST00000466591 MGPP08493 103 aa11.57□□□□□ -0.56
COL7A1-206ENST00000466591 TMEM97Q5BJF2 176 aa11.57□□□□□ -0.56
COL7A1-206ENST00000466591 NEXN-AS1Q8NBZ9 246 aa11.57□□□□□ -0.56
COL7A1-206ENST00000466591 OR10G8Q8NGN5 311 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms