RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 Q6ZVH6 145 aa13.8□□□□□ -0.2
CAPN3-209ENST00000466222 K7EP13 123 aa13.79□□□□□ -0.2
CAPN3-209ENST00000466222 DEFB131AP59861 70 aa13.79□□□□□ -0.2
CAPN3-209ENST00000466222 TMEM97Q5BJF2 176 aa13.79□□□□□ -0.2
CAPN3-209ENST00000466222 Q8N8P6 123 aa13.79□□□□□ -0.2
CAPN3-209ENST00000466222 SNAI2O43623 268 aa13.78□□□□□ -0.2
CAPN3-209ENST00000466222 SHISA2Q6UWI4 295 aa13.78□□□□□ -0.2
CAPN3-209ENST00000466222 APRG1Q8IVJ8 170 aa13.78□□□□□ -0.2
CAPN3-209ENST00000466222 OR4C5Q8NGB2 326 aa13.78□□□□□ -0.2
CAPN3-209ENST00000466222 SPAG8Q99932 426 aaPredicted RBP13.78□□□□□ -0.2
CAPN3-209ENST00000466222 IGKV3-20P01619 116 aa13.78□□□□□ -0.2
CAPN3-209ENST00000466222 CMYA5Q8N3K9 4069 aa13.77□□□□□ -0.2
CAPN3-209ENST00000466222 NOTCH3Q9UM47 2321 aa13.77□□□□□ -0.2
CAPN3-209ENST00000466222 KNCNA6PVL3 124 aa13.77□□□□□ -0.21
CAPN3-209ENST00000466222 LEPP41159 167 aa13.77□□□□□ -0.21
CAPN3-209ENST00000466222 ATP5LO75964 103 aa13.76□□□□□ -0.21
CAPN3-209ENST00000466222 HSD52Q0P140 79 aa13.76□□□□□ -0.21
CAPN3-209ENST00000466222 LINC00477Q96M19 166 aa13.76□□□□□ -0.21
CAPN3-209ENST00000466222 MAP6D1Q9H9H5 199 aa13.76□□□□□ -0.21
CAPN3-209ENST00000466222 C11orf21Q9P2W6 132 aa13.76□□□□□ -0.21
CAPN3-209ENST00000466222 TRAV25A0A0B4J276 109 aa13.76□□□□□ -0.21
CAPN3-209ENST00000466222 J3KRW8 73 aa13.76□□□□□ -0.21
CAPN3-209ENST00000466222 CD7P09564 240 aa13.76□□□□□ -0.21
CAPN3-209ENST00000466222 KIR3DS1Q14943 382 aa13.76□□□□□ -0.21
CAPN3-209ENST00000466222 ODF3L2Q3SX64 289 aa13.76□□□□□ -0.21
CAPN3-209ENST00000466222 SAMD13Q5VXD3 122 aa13.76□□□□□ -0.21
CAPN3-209ENST00000466222 Q6ZQT7 251 aa13.76□□□□□ -0.21
CAPN3-209ENST00000466222 OR2K2Q8NGT1 345 aa13.76□□□□□ -0.21
CAPN3-209ENST00000466222 OR10J6PQ8NGY7 276 aa13.76□□□□□ -0.21
CAPN3-209ENST00000466222 ZMAT4Q9H898 229 aa13.76□□□□□ -0.21
CAPN3-209ENST00000466222 A6NDN8 102 aa13.75□□□□□ -0.21
CAPN3-209ENST00000466222 WFDC9Q8NEX5 89 aa13.75□□□□□ -0.21
CAPN3-209ENST00000466222 IGLV2-18A0A075B6J9 118 aa13.74□□□□□ -0.21
CAPN3-209ENST00000466222 A0A0J9YX75 114 aa13.74□□□□□ -0.21
CAPN3-209ENST00000466222 FXYD7P58549 80 aa13.74□□□□□ -0.21
CAPN3-209ENST00000466222 WFDC10AQ9H1F0 79 aa13.74□□□□□ -0.21
CAPN3-209ENST00000466222 TRAV2A0A0B4J234 112 aa13.74□□□□□ -0.21
CAPN3-209ENST00000466222 MRAP2Q96G30 205 aa13.74□□□□□ -0.21
CAPN3-209ENST00000466222 SORL1Q92673 2214 aa13.73□□□□□ -0.21
CAPN3-209ENST00000466222 ODF1Q14990 250 aa13.73□□□□□ -0.21
CAPN3-209ENST00000466222 PRR9Q5T870 116 aa13.73□□□□□ -0.21
CAPN3-209ENST00000466222 CBY3A6NI87 242 aa13.72□□□□□ -0.21
CAPN3-209ENST00000466222 SPANXN1Q5VSR9 72 aa13.72□□□□□ -0.21
CAPN3-209ENST00000466222 TRBV7-9A0A0J9YWB2 115 aa13.72□□□□□ -0.21
CAPN3-209ENST00000466222 C7orf71A4D174 169 aa13.72□□□□□ -0.21
CAPN3-209ENST00000466222 H3BRM9 83 aa13.72□□□□□ -0.21
CAPN3-209ENST00000466222 MED14OSP0DP75 135 aa13.72□□□□□ -0.21
CAPN3-209ENST00000466222 HLA-DRB4P13762 266 aa13.72□□□□□ -0.21
CAPN3-209ENST00000466222 EVI2AP22794 236 aa13.72□□□□□ -0.21
CAPN3-209ENST00000466222 C9orf66Q5T8R8 295 aa13.72□□□□□ -0.21
CAPN3-209ENST00000466222 NRACQ8N912 160 aa13.72□□□□□ -0.21
CAPN3-209ENST00000466222 HLA-DRB4X5D2U9 266 aa13.72□□□□□ -0.21
CAPN3-209ENST00000466222 TRAV21A0A0B4J279 112 aa13.71□□□□□ -0.21
CAPN3-209ENST00000466222 GAS8-AS1O95177 125 aa13.71□□□□□ -0.21
CAPN3-209ENST00000466222 BEAN1Q3B7T3 259 aa13.71□□□□□ -0.21
CAPN3-209ENST00000466222 DKK2Q9UBU2 259 aa13.71□□□□□ -0.21
CAPN3-209ENST00000466222 LAGE3Q14657 143 aa13.7□□□□□ -0.22
CAPN3-209ENST00000466222 FOXI2Q6ZQN5 318 aa13.7□□□□□ -0.22
CAPN3-209ENST00000466222 C18orf15Q96N68 181 aa13.7□□□□□ -0.22
CAPN3-209ENST00000466222 HIGD1BQ9P298 99 aa13.7□□□□□ -0.22
CAPN3-209ENST00000466222 IGKCP01834 107 aa13.7□□□□□ -0.22
CAPN3-209ENST00000466222 PRSS1P07477 247 aa13.7□□□□□ -0.22
CAPN3-209ENST00000466222 OXLD1Q5BKU9 147 aa13.7□□□□□ -0.22
CAPN3-209ENST00000466222 ZFAND2AQ8N6M9 145 aa13.7□□□□□ -0.22
CAPN3-209ENST00000466222 FAM19A4Q96LR4 140 aa13.7□□□□□ -0.22
CAPN3-209ENST00000466222 NMUP48645 174 aa13.69□□□□□ -0.22
CAPN3-209ENST00000466222 AMMECR1LQ6DCA0 310 aa13.69□□□□□ -0.22
CAPN3-209ENST00000466222 C19orf73Q9NVV2 129 aa13.69□□□□□ -0.22
CAPN3-209ENST00000466222 RBMY1BA6NDE4 496 aaKnown RBP13.68□□□□□ -0.22
CAPN3-209ENST00000466222 RBMY1EA6NEQ0 496 aaKnown RBP13.68□□□□□ -0.22
CAPN3-209ENST00000466222 OR11H12B2RN74 326 aa13.68□□□□□ -0.22
CAPN3-209ENST00000466222 H3BMM0 161 aa13.68□□□□□ -0.22
CAPN3-209ENST00000466222 K7EMI3 77 aa13.68□□□□□ -0.22
CAPN3-209ENST00000466222 DPM2O94777 84 aa13.68□□□□□ -0.22
CAPN3-209ENST00000466222 RBMY1DP0C7P1 496 aaKnown RBP13.68□□□□□ -0.22
CAPN3-209ENST00000466222 GATA1P15976 413 aaPredicted RBP13.68□□□□□ -0.22
CAPN3-209ENST00000466222 INSL3P51460 131 aa13.68□□□□□ -0.22
CAPN3-209ENST00000466222 SMIM17P0DL12 118 aa13.68□□□□□ -0.22
CAPN3-209ENST00000466222 AP1S3Q96PC3 154 aa13.68□□□□□ -0.22
CAPN3-209ENST00000466222 TRAV12-2A0A075B6T6 113 aa13.67□□□□□ -0.22
CAPN3-209ENST00000466222 C9orf118A6NHY6 69 aa13.67□□□□□ -0.22
CAPN3-209ENST00000466222 H3BVH4 76 aa13.67□□□□□ -0.22
CAPN3-209ENST00000466222 AMTNQ6UX39 209 aa13.67□□□□□ -0.22
CAPN3-209ENST00000466222 HHLA3Q9XRX5 114 aa13.67□□□□□ -0.22
CAPN3-209ENST00000466222 RNASE4P34096 147 aaKnown RBP13.66□□□□□ -0.22
CAPN3-209ENST00000466222 SPINK13Q1W4C9 94 aa13.66□□□□□ -0.22
CAPN3-209ENST00000466222 ASIPP42127 132 aa13.66□□□□□ -0.22
CAPN3-209ENST00000466222 PCP2Q8IVA1 136 aa13.66□□□□□ -0.22
CAPN3-209ENST00000466222 RNASE8Q8TDE3 154 aaKnown RBP13.66□□□□□ -0.22
CAPN3-209ENST00000466222 C20orf78Q9BR46 151 aa13.66□□□□□ -0.22
CAPN3-209ENST00000466222 TRAV8-6A0A0B4J262 113 aa13.65□□□□□ -0.22
CAPN3-209ENST00000466222 M0R381 172 aa13.65□□□□□ -0.22
CAPN3-209ENST00000466222 ORMDL2Q53FV1 153 aa13.65□□□□□ -0.22
CAPN3-209ENST00000466222 GTF2H5Q6ZYL4 71 aa13.65□□□□□ -0.22
CAPN3-209ENST00000466222 SMIM2Q9BVW6 85 aa13.65□□□□□ -0.22
CAPN3-209ENST00000466222 DPH3P1Q9H4G8 78 aa13.65□□□□□ -0.22
CAPN3-209ENST00000466222 DNHD1Q96M86 4753 aa13.65□□□□□ -0.22
CAPN3-209ENST00000466222 PPP1R17O96001 155 aa13.64□□□□□ -0.23
CAPN3-209ENST00000466222 A0A087WX48 190 aa13.63□□□□□ -0.23
CAPN3-209ENST00000466222 TRAV12-1A0A0B4J245 112 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms