RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 UMAD1C9J7I0 102 aa9.4□□□□□ -0.9
CACNA1C-224ENST00000465934 M0R381 172 aa9.4□□□□□ -0.9
CACNA1C-224ENST00000465934 XGP55808 180 aa9.4□□□□□ -0.9
CACNA1C-224ENST00000465934 RPL19P84098 196 aaKnown RBP9.4□□□□□ -0.9
CACNA1C-224ENST00000465934 SYT8Q8NBV8 401 aa9.4□□□□□ -0.9
CACNA1C-224ENST00000465934 PHLDA3Q9Y5J5 127 aa9.4□□□□□ -0.9
CACNA1C-224ENST00000465934 FAT1Q14517 4588 aa9.4□□□□□ -0.91
CACNA1C-224ENST00000465934 A0A0D9SG52 128 aa9.39□□□□□ -0.91
CACNA1C-224ENST00000465934 KANTRA0A1W2PQU2 76 aa9.39□□□□□ -0.91
CACNA1C-224ENST00000465934 PSCAO43653 123 aa9.39□□□□□ -0.91
CACNA1C-224ENST00000465934 TPT1P13693 172 aaKnown RBP9.38□□□□□ -0.91
CACNA1C-224ENST00000465934 SFRP2Q96HF1 295 aa9.38□□□□□ -0.91
CACNA1C-224ENST00000465934 RHODO00212 210 aa9.37□□□□□ -0.91
CACNA1C-224ENST00000465934 H2AFB1P0C5Y9 115 aa9.37□□□□□ -0.91
CACNA1C-224ENST00000465934 CCL20P78556 96 aa9.37□□□□□ -0.91
CACNA1C-224ENST00000465934 HAMPP81172 84 aa9.37□□□□□ -0.91
CACNA1C-224ENST00000465934 TMUB2Q71RG4 321 aa9.37□□□□□ -0.91
CACNA1C-224ENST00000465934 DAZ4Q86SG3 579 aaKnown RBP9.37□□□□□ -0.91
CACNA1C-224ENST00000465934 ZFP82Q8N141 532 aa9.37□□□□□ -0.91
CACNA1C-224ENST00000465934 MLST8Q9BVC4 326 aa9.37□□□□□ -0.91
CACNA1C-224ENST00000465934 DAZ3Q9NR90 486 aaKnown RBP9.37□□□□□ -0.91
CACNA1C-224ENST00000465934 PFDN1O60925 122 aa9.36□□□□□ -0.91
CACNA1C-224ENST00000465934 GCSHP23434 173 aa9.36□□□□□ -0.91
CACNA1C-224ENST00000465934 WFDC2Q14508 124 aa9.36□□□□□ -0.91
CACNA1C-224ENST00000465934 BAGE2Q86Y30 109 aa9.36□□□□□ -0.91
CACNA1C-224ENST00000465934 OR10AG1Q8NH19 301 aa9.36□□□□□ -0.91
CACNA1C-224ENST00000465934 IGLV5-52A0A0A0MRZ9 124 aa9.35□□□□□ -0.91
CACNA1C-224ENST00000465934 MUC21A0A0G2JKD1 596 aa9.35□□□□□ -0.91
CACNA1C-224ENST00000465934 MUC21A0A140T8X8 626 aa9.35□□□□□ -0.91
CACNA1C-224ENST00000465934 LAGE3Q14657 143 aa9.35□□□□□ -0.91
CACNA1C-224ENST00000465934 PRR27Q6MZM9 219 aa9.35□□□□□ -0.91
CACNA1C-224ENST00000465934 Q8N814 137 aa9.35□□□□□ -0.91
CACNA1C-224ENST00000465934 DNAJC30Q96LL9 226 aa9.35□□□□□ -0.91
CACNA1C-224ENST00000465934 DERL1Q9BUN8 251 aa9.35□□□□□ -0.91
CACNA1C-224ENST00000465934 GNG13Q9P2W3 67 aa9.35□□□□□ -0.91
CACNA1C-224ENST00000465934 S100A9P06702 114 aaKnown RBP9.34□□□□□ -0.91
CACNA1C-224ENST00000465934 RPL35P42766 123 aaKnown RBP9.34□□□□□ -0.91
CACNA1C-224ENST00000465934 BOLA1Q9Y3E2 137 aa9.34□□□□□ -0.91
CACNA1C-224ENST00000465934 A0A087WWC5 75 aa9.33□□□□□ -0.92
CACNA1C-224ENST00000465934 LECT2O14960 151 aa9.33□□□□□ -0.92
CACNA1C-224ENST00000465934 SSTP61278 116 aa9.33□□□□□ -0.92
CACNA1C-224ENST00000465934 EIF5AP63241 154 aaKnown RBP9.33□□□□□ -0.92
CACNA1C-224ENST00000465934 VPS13BQ7Z7G8 4022 aa9.33□□□□□ -0.92
CACNA1C-224ENST00000465934 EPM2AB3EWF7 344 aa9.32□□□□□ -0.92
CACNA1C-224ENST00000465934 UBE2D3P61077 147 aa9.32□□□□□ -0.92
CACNA1C-224ENST00000465934 UBE2D2P62837 147 aa9.32□□□□□ -0.92
CACNA1C-224ENST00000465934 NIT1Q86X76 327 aa9.32□□□□□ -0.92
CACNA1C-224ENST00000465934 TRBV10-1A0A0K0K1A3 114 aa9.31□□□□□ -0.92
CACNA1C-224ENST00000465934 SNAI2O43623 268 aa9.31□□□□□ -0.92
CACNA1C-224ENST00000465934 SMR3BP02814 79 aaPredicted RBP9.31□□□□□ -0.92
CACNA1C-224ENST00000465934 CXCL1P09341 107 aa9.31□□□□□ -0.92
CACNA1C-224ENST00000465934 NTN5Q8WTR8 489 aaPredicted RBP9.31□□□□□ -0.92
CACNA1C-224ENST00000465934 C11orf52Q96A22 123 aa9.31□□□□□ -0.92
CACNA1C-224ENST00000465934 SSBP4Q9BWG4 385 aaPredicted RBP9.31□□□□□ -0.92
CACNA1C-224ENST00000465934 DNAH8Q96JB1 4490 aa9.31□□□□□ -0.92
CACNA1C-224ENST00000465934 TRBV7-3A0A075B6L6 115 aa9.3□□□□□ -0.92
CACNA1C-224ENST00000465934 TRAV8-3A0A0A6YYJ7 113 aa9.3□□□□□ -0.92
CACNA1C-224ENST00000465934 TRAV1-1A0A0B4J248 108 aa9.3□□□□□ -0.92
CACNA1C-224ENST00000465934 GZMBP10144 247 aa9.3□□□□□ -0.92
CACNA1C-224ENST00000465934 RPL36AP83881 106 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-224ENST00000465934 ZNF56Q15929 161 aa9.3□□□□□ -0.92
CACNA1C-224ENST00000465934 CENPWQ5EE01 88 aa9.3□□□□□ -0.92
CACNA1C-224ENST00000465934 Q5VSD8 79 aa9.3□□□□□ -0.92
CACNA1C-224ENST00000465934 RPL36ALQ969Q0 106 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-224ENST00000465934 TM2D2Q9BX73 214 aa9.3□□□□□ -0.92
CACNA1C-224ENST00000465934 MANBALQ9NQG1 85 aa9.3□□□□□ -0.92
CACNA1C-224ENST00000465934 RAB19A4D1S5 217 aa9.29□□□□□ -0.92
CACNA1C-224ENST00000465934 IGLV2-8P01709 118 aa9.29□□□□□ -0.92
CACNA1C-224ENST00000465934 OR5AL1P0C617 328 aa9.29□□□□□ -0.92
CACNA1C-224ENST00000465934 RAB4BP61018 213 aa9.29□□□□□ -0.92
CACNA1C-224ENST00000465934 SPANXN1Q5VSR9 72 aa9.29□□□□□ -0.92
CACNA1C-224ENST00000465934 NEXN-AS1Q8NBZ9 246 aa9.29□□□□□ -0.92
CACNA1C-224ENST00000465934 OR10G8Q8NGN5 311 aa9.29□□□□□ -0.92
CACNA1C-224ENST00000465934 BAALCQ8WXS3 180 aa9.29□□□□□ -0.92
CACNA1C-224ENST00000465934 FAM30AQ9NZY2 134 aa9.29□□□□□ -0.92
CACNA1C-224ENST00000465934 KLK12Q9UKR0 248 aa9.29□□□□□ -0.92
CACNA1C-224ENST00000465934 URGCP-MRPS24S4R325 110 aa9.29□□□□□ -0.92
CACNA1C-224ENST00000465934 RBFOX3A6NFN3 312 aa9.28□□□□□ -0.92
CACNA1C-224ENST00000465934 SULT1A2P50226 295 aa9.28□□□□□ -0.92
CACNA1C-224ENST00000465934 RAB5CP51148 216 aa9.28□□□□□ -0.92
CACNA1C-224ENST00000465934 TOR2AQ5JU69 321 aa9.28□□□□□ -0.92
CACNA1C-224ENST00000465934 TCTE3Q8IZS6 198 aa9.28□□□□□ -0.92
CACNA1C-224ENST00000465934 KIF25-AS1Q9Y6Z4 181 aa9.28□□□□□ -0.92
CACNA1C-224ENST00000465934 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.27□□□□□ -0.93
CACNA1C-224ENST00000465934 A0A087WX48 190 aa9.27□□□□□ -0.93
CACNA1C-224ENST00000465934 UBE2WQ96B02 151 aa9.27□□□□□ -0.93
CACNA1C-224ENST00000465934 TMEM70Q9BUB7 260 aa9.27□□□□□ -0.93
CACNA1C-224ENST00000465934 TPPP3Q9BW30 176 aa9.27□□□□□ -0.93
CACNA1C-224ENST00000465934 HERC1Q15751 4861 aa9.27□□□□□ -0.93
CACNA1C-224ENST00000465934 TRBV20OR9-2A0A075B6H5 130 aa9.26□□□□□ -0.93
CACNA1C-224ENST00000465934 IGKV2D-24A0A075B6R9 120 aa9.26□□□□□ -0.93
CACNA1C-224ENST00000465934 TRBV6-8A0A0A6YYG3 113 aa9.26□□□□□ -0.93
CACNA1C-224ENST00000465934 F5H697 171 aa9.26□□□□□ -0.93
CACNA1C-224ENST00000465934 MEF2BQ02080 365 aaPredicted RBP9.26□□□□□ -0.93
CACNA1C-224ENST00000465934 EIF5AL1Q6IS14 154 aaKnown RBP9.26□□□□□ -0.93
CACNA1C-224ENST00000465934 FRZBQ92765 325 aa9.26□□□□□ -0.93
CACNA1C-224ENST00000465934 MYCBP2O75592 4640 aa9.26□□□□□ -0.93
CACNA1C-224ENST00000465934 SRRM2Q9UQ35 2752 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-224ENST00000465934 C19orf71A6NCJ1 209 aa9.25□□□□□ -0.93
CACNA1C-224ENST00000465934 TMEM262E9PQX1 116 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms