RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 ZNF680Q8NEM1 530 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 ZNRF2Q8NHG8 242 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 CMTM2Q8TAZ6 248 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 FAM213BQ8TBF2 198 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 MBD3L1Q8WWY6 194 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 ZC2HC1AQ96GY0 325 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 FAM210BQ96KR6 192 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 TMEM167BQ9NRX6 74 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 NAGKQ9UJ70 344 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 PAM16Q9Y3D7 125 aa3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 APOBP04114 4563 aaKnown RBP3.29□□□□□ -1.88
EXOSC3-204ENST00000465860 HSPG2P98160 4391 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 TRGV2A0A075B6R0 118 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 A0A096LPF7 62 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 TRAV21A0A0B4J279 112 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 IGKV3D-20A0A0C4DH25 116 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 hDV102S1A0JD36 115 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 PEX7O00628 323 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 IFNA1P01562 189 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 IFNA7P01567 189 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 TAGLN2P37802 199 aaKnown RBP3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 NKX2-5P52952 324 aaPredicted RBP3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 ZNF415Q09FC8 603 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 RNF212Q495C1 297 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 FAM159AQ6UWV7 190 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 Q86TA4 180 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 UBE2DNLQ8IWF7 75 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 C15orf53Q8NAA6 179 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 NHLRC2Q8NBF2 726 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 SFT2D1Q8WV19 159 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 RASL10AQ92737 203 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 C18orf15Q96N68 181 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 TCEAL7Q9BRU2 100 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 ATG101Q9BSB4 218 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 DERL1Q9BUN8 251 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 JPT2Q9H910 190 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 Q9UF83 564 aa3.28□□□□□ -1.88
EXOSC3-204ENST00000465860 SERTM2A0A1B0GWG4 89 aa3.27□□□□□ -1.89
EXOSC3-204ENST00000465860 K7EQM0 130 aa3.27□□□□□ -1.89
EXOSC3-204ENST00000465860 PFN1P07737 140 aaKnown RBP3.27□□□□□ -1.89
EXOSC3-204ENST00000465860 CFC1BP0CG36 223 aa3.27□□□□□ -1.89
EXOSC3-204ENST00000465860 CFC1P0CG37 223 aa3.27□□□□□ -1.89
EXOSC3-204ENST00000465860 SULT1A2P50226 295 aa3.27□□□□□ -1.89
EXOSC3-204ENST00000465860 CRYBA4P53673 196 aa3.27□□□□□ -1.89
EXOSC3-204ENST00000465860 RAB14P61106 215 aa3.27□□□□□ -1.89
EXOSC3-204ENST00000465860 GAGE1Q13065 139 aa3.27□□□□□ -1.89
EXOSC3-204ENST00000465860 GAGE4Q13068 117 aa3.27□□□□□ -1.89
EXOSC3-204ENST00000465860 LGALS9BQ3B8N2 356 aa3.27□□□□□ -1.89
EXOSC3-204ENST00000465860 SMUG1Q53HV7 270 aa3.27□□□□□ -1.89
EXOSC3-204ENST00000465860 ZNF506Q5JVG8 444 aa3.27□□□□□ -1.89
EXOSC3-204ENST00000465860 CST9LP1Q5W188 147 aa3.27□□□□□ -1.89
EXOSC3-204ENST00000465860 C9orf85Q96MD7 179 aa3.27□□□□□ -1.89
EXOSC3-204ENST00000465860 NKX6-2Q9C056 277 aaPredicted RBP3.27□□□□□ -1.89
EXOSC3-204ENST00000465860 MANBALQ9NQG1 85 aa3.27□□□□□ -1.89
EXOSC3-204ENST00000465860 DNAH8Q96JB1 4490 aa3.27□□□□□ -1.89
EXOSC3-204ENST00000465860 RYR1P21817 5038 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 TMSB15BA0A087X1C1 80 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 IGHV3-73A0A0B4J1V6 119 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 TRAV1-1A0A0B4J248 108 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 NBDYA0A0U1RRE5 68 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 GRIFINA4D1Z8 144 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 FBLL1A6NHQ2 334 aaKnown RBP3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 KRBOX1C9JBD0 128 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 C9JCJ5 164 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 H3BNG1 76 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 K7EQD1 137 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 M0R036 132 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 SH2D1AO60880 128 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 LTAP01374 205 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 IGLV2-8P01709 118 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 CAMPP49913 170 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 RPL19P84098 196 aaKnown RBP3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 ZNF674Q2M3X9 581 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 ZNF876PQ49A33 203 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 CFAP126Q5VTH2 177 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 UFSP1Q6NVU6 142 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 ALKAL2Q6UX46 152 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 COX8CQ7Z4L0 72 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 HIST1H2BAQ96A08 127 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 TXNDC17Q9BRA2 123 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 SPXQ9BT56 116 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 NDFIP1Q9BT67 221 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 SAMD10Q9BYL1 202 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 HHLA3Q9XRX5 114 aa3.26□□□□□ -1.89
EXOSC3-204ENST00000465860 TRBV20OR9-2A0A075B6H5 130 aa3.25□□□□□ -1.89
EXOSC3-204ENST00000465860 TRAV4A0A0B4J268 109 aa3.25□□□□□ -1.89
EXOSC3-204ENST00000465860 TRGV4A0A0C4DH28 118 aa3.25□□□□□ -1.89
EXOSC3-204ENST00000465860 TRBV6-1A0A0K0K1D8 114 aa3.25□□□□□ -1.89
EXOSC3-204ENST00000465860 FABP5P3A8MUU1 101 aa3.25□□□□□ -1.89
EXOSC3-204ENST00000465860 B4DEV8 164 aa3.25□□□□□ -1.89
EXOSC3-204ENST00000465860 H3BVH4 76 aa3.25□□□□□ -1.89
EXOSC3-204ENST00000465860 M0R2P5 195 aa3.25□□□□□ -1.89
EXOSC3-204ENST00000465860 RS1O15537 224 aa3.25□□□□□ -1.89
EXOSC3-204ENST00000465860 ORM1P02763 201 aa3.25□□□□□ -1.89
EXOSC3-204ENST00000465860 GATA1P15976 413 aaPredicted RBP3.25□□□□□ -1.89
EXOSC3-204ENST00000465860 CCL18P55774 89 aa3.25□□□□□ -1.89
EXOSC3-204ENST00000465860 SAPCD1Q5SSQ6 148 aa3.25□□□□□ -1.89
EXOSC3-204ENST00000465860 LYPD5Q6UWN5 251 aa3.25□□□□□ -1.89
EXOSC3-204ENST00000465860 WFDC10BQ8IUB3 73 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms