RNA–Protein interactions for RNA: ENST00000463839.2

ITM2B-203, Transcript of integral membrane protein 2B, humanhuman

TSL 3

Gene ITM2B, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-203ENST00000463839 FAM186AA6NE01 2351 aa1.74□□□□□ -2.13
ITM2B-203ENST00000463839 TROQ12816 1431 aaPredicted RBP1.74□□□□□ -2.13
ITM2B-203ENST00000463839 ARHGEF5Q12774 1597 aa1.74□□□□□ -2.13
ITM2B-203ENST00000463839 PNMA8CA0A1B0GUJ8 204 aa1.74□□□□□ -2.13
ITM2B-203ENST00000463839 A6NN06 94 aa1.74□□□□□ -2.13
ITM2B-203ENST00000463839 BBIP1A8MTZ0 92 aa1.74□□□□□ -2.13
ITM2B-203ENST00000463839 NPFFO15130 113 aa1.74□□□□□ -2.13
ITM2B-203ENST00000463839 PPYP01298 95 aa1.74□□□□□ -2.13
ITM2B-203ENST00000463839 TSPAN19P0C672 248 aa1.74□□□□□ -2.13
ITM2B-203ENST00000463839 OBSCN-AS1Q96MR7 158 aa1.74□□□□□ -2.13
ITM2B-203ENST00000463839 LIMD2Q9BT23 127 aa1.74□□□□□ -2.13
ITM2B-203ENST00000463839 KRTAP4-1Q9BYQ7 146 aa1.74□□□□□ -2.13
ITM2B-203ENST00000463839 WFDC10AQ9H1F0 79 aa1.74□□□□□ -2.13
ITM2B-203ENST00000463839 TMEM14CQ9P0S9 112 aa1.74□□□□□ -2.13
ITM2B-203ENST00000463839 LAMB2P55268 1798 aa1.74□□□□□ -2.13
ITM2B-203ENST00000463839 MYO18BQ8IUG5 2567 aa1.74□□□□□ -2.13
ITM2B-203ENST00000463839 MYH1P12882 1939 aa1.74□□□□□ -2.13
ITM2B-203ENST00000463839 INTS1Q8N201 2190 aaKnown RBP1.74□□□□□ -2.13
ITM2B-203ENST00000463839 LRRC37A3O60309 1634 aa1.73□□□□□ -2.13
ITM2B-203ENST00000463839 ANKRD17O75179 2603 aaKnown RBP1.73□□□□□ -2.13
ITM2B-203ENST00000463839 FREM3P0C091 2139 aa1.73□□□□□ -2.13
ITM2B-203ENST00000463839 USP34Q70CQ2 3546 aa1.73□□□□□ -2.13
ITM2B-203ENST00000463839 GCN1Q92616 2671 aaKnown RBP1.73□□□□□ -2.13
ITM2B-203ENST00000463839 IGKV3-7A0A075B6H7 116 aa1.73□□□□□ -2.13
ITM2B-203ENST00000463839 IGKV2-40A0A087WW87 121 aaPredicted RBP1.73□□□□□ -2.13
ITM2B-203ENST00000463839 LOC110117498A0A087WWA1 95 aa1.73□□□□□ -2.13
ITM2B-203ENST00000463839 GEMIN2O14893 280 aaKnown RBP1.73□□□□□ -2.13
ITM2B-203ENST00000463839 INE1O15225 51 aa1.73□□□□□ -2.13
ITM2B-203ENST00000463839 IGKV2D-40P01614 121 aaPredicted RBP1.73□□□□□ -2.13
ITM2B-203ENST00000463839 FMN2Q9NZ56 1722 aa1.73□□□□□ -2.13
ITM2B-203ENST00000463839 PTPRFP10586 1907 aa1.73□□□□□ -2.13
ITM2B-203ENST00000463839 CACNA1HO95180 2353 aa1.73□□□□□ -2.13
ITM2B-203ENST00000463839 COL4A1P02462 1669 aa1.73□□□□□ -2.13
ITM2B-203ENST00000463839 ZFYVE26Q68DK2 2539 aa1.73□□□□□ -2.13
ITM2B-203ENST00000463839 CLIP1P30622 1438 aa1.73□□□□□ -2.13
ITM2B-203ENST00000463839 SMG6Q86US8 1419 aaKnown RBP1.73□□□□□ -2.13
ITM2B-203ENST00000463839 PAPPAQ13219 1627 aa1.73□□□□□ -2.13
ITM2B-203ENST00000463839 PTPN23Q9H3S7 1636 aa1.73□□□□□ -2.13
ITM2B-203ENST00000463839 MAP1BP46821 2468 aaKnown RBP1.73□□□□□ -2.13
ITM2B-203ENST00000463839 BPTFQ12830 3046 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 SPTBN2O15020 2390 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 NAV3Q8IVL0 2385 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 LMTK2Q8IWU2 1503 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 PEAK1Q9H792 1746 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 TNRC6CQ9HCJ0 1690 aaKnown RBP1.72□□□□□ -2.13
ITM2B-203ENST00000463839 MBD5Q9P267 1494 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 TRAV23DV6A0A075B6W5 121 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 IFITM5A6NNB3 132 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 ZNF670-ZNF695F2Z2N8 137 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 K7EP13 123 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 GNG7O60262 68 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 RBP4P02753 201 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 PRB4P10163 310 aaPredicted RBP1.72□□□□□ -2.13
ITM2B-203ENST00000463839 DNAJB13P59910 316 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 C3orf62Q6ZUJ4 267 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 SNX29P2Q8IUI4 249 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 OR10AC1Q8NH08 325 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 CYSTM1Q9H1C7 97 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 SPTA1P02549 2419 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 FANCMQ8IYD8 2048 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 TNRC6BQ9UPQ9 1833 aaKnown RBP1.72□□□□□ -2.13
ITM2B-203ENST00000463839 EXPH5Q8NEV8 1989 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 CDC42BPGQ6DT37 1551 aa1.72□□□□□ -2.13
ITM2B-203ENST00000463839 IBTKQ9P2D0 1353 aaPredicted RBP1.72□□□□□ -2.13
ITM2B-203ENST00000463839 NRAPQ86VF7 1730 aa1.71□□□□□ -2.13
ITM2B-203ENST00000463839 ITPR3Q14573 2671 aa1.71□□□□□ -2.14
ITM2B-203ENST00000463839 PIK3C2BO00750 1634 aa1.71□□□□□ -2.14
ITM2B-203ENST00000463839 NRXN3Q9Y4C0 1643 aa1.71□□□□□ -2.14
ITM2B-203ENST00000463839 IGKV2-29A2NJV5 120 aaPredicted RBP1.71□□□□□ -2.14
ITM2B-203ENST00000463839 EFCAB10A6NFE3 127 aa1.71□□□□□ -2.14
ITM2B-203ENST00000463839 JMJD7-PLA2G4BH0Y9G9 81 aa1.71□□□□□ -2.14
ITM2B-203ENST00000463839 M0R2N4 97 aa1.71□□□□□ -2.14
ITM2B-203ENST00000463839 SULT1C4O75897 302 aa1.71□□□□□ -2.14
ITM2B-203ENST00000463839 IGHV3-33P01772 117 aa1.71□□□□□ -2.14
ITM2B-203ENST00000463839 PLGLB1Q02325 96 aa1.71□□□□□ -2.14
ITM2B-203ENST00000463839 ASB16-AS1Q495Z4 193 aa1.71□□□□□ -2.14
ITM2B-203ENST00000463839 GDF5OSQ5U4N7 250 aa1.71□□□□□ -2.14
ITM2B-203ENST00000463839 RPL13AP3Q6NVV1 102 aa1.71□□□□□ -2.14
ITM2B-203ENST00000463839 LINC00322Q6ZN03 302 aaPredicted RBP1.71□□□□□ -2.14
ITM2B-203ENST00000463839 TCTEX1D1Q8N7M0 179 aa1.71□□□□□ -2.14
ITM2B-203ENST00000463839 HELZ2Q9BYK8 2649 aaKnown RBP1.71□□□□□ -2.14
ITM2B-203ENST00000463839 SDK1Q7Z5N4 2213 aa1.71□□□□□ -2.14
ITM2B-203ENST00000463839 PLCH1Q4KWH8 1693 aa1.71□□□□□ -2.14
ITM2B-203ENST00000463839 CEP250Q9BV73 2442 aa1.7□□□□□ -2.14
ITM2B-203ENST00000463839 A0A1W2PPB8 328 aa1.7□□□□□ -2.14
ITM2B-203ENST00000463839 A0A1W2PRS3 328 aa1.7□□□□□ -2.14
ITM2B-203ENST00000463839 KIR3DP1A8MWS1 328 aa1.7□□□□□ -2.14
ITM2B-203ENST00000463839 IL7P13232 177 aa1.7□□□□□ -2.14
ITM2B-203ENST00000463839 SPTAN1Q13813 2472 aaKnown RBP1.7□□□□□ -2.14
ITM2B-203ENST00000463839 IZUMO2Q6UXV1 221 aa1.7□□□□□ -2.14
ITM2B-203ENST00000463839 MYO5CQ9NQX4 1742 aa1.7□□□□□ -2.14
ITM2B-203ENST00000463839 NOP16Q9Y3C1 178 aaKnown RBP1.7□□□□□ -2.14
ITM2B-203ENST00000463839 GVINP1Q7Z2Y8 2422 aa1.7□□□□□ -2.14
ITM2B-203ENST00000463839 SIP14410 1827 aa1.7□□□□□ -2.14
ITM2B-203ENST00000463839 COL14A1Q05707 1796 aaKnown RBP1.7□□□□□ -2.14
ITM2B-203ENST00000463839 WDFY4Q6ZS81 3184 aa1.69□□□□□ -2.14
ITM2B-203ENST00000463839 HTTP42858 3142 aa1.69□□□□□ -2.14
ITM2B-203ENST00000463839 EP300Q09472 2414 aaPredicted RBP1.69□□□□□ -2.14
ITM2B-203ENST00000463839 INO80Q9ULG1 1556 aaPredicted RBP1.69□□□□□ -2.14
ITM2B-203ENST00000463839 TNRC6AQ8NDV7 1962 aaKnown RBP1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms