RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 GRIFINA4D1Z8 144 aa13.7□□□□□ -0.22
PDLIM4-205ENST00000463615 EPM2AB3EWF7 344 aa13.7□□□□□ -0.22
PDLIM4-205ENST00000463615 PAGE4O60829 102 aa13.7□□□□□ -0.22
PDLIM4-205ENST00000463615 AKR1C3P42330 323 aa13.7□□□□□ -0.22
PDLIM4-205ENST00000463615 TM2D2Q9BX73 214 aa13.7□□□□□ -0.22
PDLIM4-205ENST00000463615 PHLDA3Q9Y5J5 127 aa13.7□□□□□ -0.22
PDLIM4-205ENST00000463615 CXCL1P09341 107 aa13.69□□□□□ -0.22
PDLIM4-205ENST00000463615 TPT1P13693 172 aaKnown RBP13.69□□□□□ -0.22
PDLIM4-205ENST00000463615 Q8N814 137 aa13.69□□□□□ -0.22
PDLIM4-205ENST00000463615 SFT2D1Q8WV19 159 aa13.69□□□□□ -0.22
PDLIM4-205ENST00000463615 Q9HAA7 133 aa13.69□□□□□ -0.22
PDLIM4-205ENST00000463615 ZFP82Q8N141 532 aa13.68□□□□□ -0.22
PDLIM4-205ENST00000463615 MLST8Q9BVC4 326 aa13.68□□□□□ -0.22
PDLIM4-205ENST00000463615 IGLV5-52A0A0A0MRZ9 124 aa13.67□□□□□ -0.22
PDLIM4-205ENST00000463615 TRAV8-3A0A0A6YYJ7 113 aa13.67□□□□□ -0.22
PDLIM4-205ENST00000463615 TRBV10-1A0A0K0K1A3 114 aa13.67□□□□□ -0.22
PDLIM4-205ENST00000463615 BCL2L11O43521 198 aa13.67□□□□□ -0.22
PDLIM4-205ENST00000463615 TOR2AQ5JU69 321 aa13.67□□□□□ -0.22
PDLIM4-205ENST00000463615 FAM213BQ8TBF2 198 aa13.67□□□□□ -0.22
PDLIM4-205ENST00000463615 TMEM70Q9BUB7 260 aa13.67□□□□□ -0.22
PDLIM4-205ENST00000463615 EIF5AP63241 154 aaKnown RBP13.66□□□□□ -0.22
PDLIM4-205ENST00000463615 Q8N3U1 123 aa13.66□□□□□ -0.22
PDLIM4-205ENST00000463615 ZNF471Q9BX82 626 aaPredicted RBP13.66□□□□□ -0.22
PDLIM4-205ENST00000463615 TMSB15BA0A087X1C1 80 aa13.65□□□□□ -0.22
PDLIM4-205ENST00000463615 KANTRA0A1W2PQU2 76 aa13.65□□□□□ -0.22
PDLIM4-205ENST00000463615 M0R381 172 aa13.65□□□□□ -0.22
PDLIM4-205ENST00000463615 FAM74A4Q5TZK3 123 aa13.65□□□□□ -0.22
PDLIM4-205ENST00000463615 DNAH8Q96JB1 4490 aa13.64□□□□□ -0.23
PDLIM4-205ENST00000463615 A0A087WWL8 130 aa13.64□□□□□ -0.23
PDLIM4-205ENST00000463615 C1QBP02746 253 aa13.64□□□□□ -0.23
PDLIM4-205ENST00000463615 DAZ4Q86SG3 579 aaKnown RBP13.64□□□□□ -0.23
PDLIM4-205ENST00000463615 CHCHD7Q9BUK0 85 aa13.64□□□□□ -0.23
PDLIM4-205ENST00000463615 SSBP4Q9BWG4 385 aaPredicted RBP13.64□□□□□ -0.23
PDLIM4-205ENST00000463615 DAZ3Q9NR90 486 aaKnown RBP13.64□□□□□ -0.23
PDLIM4-205ENST00000463615 SCO2A0A1W2PP80 73 aa13.63□□□□□ -0.23
PDLIM4-205ENST00000463615 PFDN1O60925 122 aa13.63□□□□□ -0.23
PDLIM4-205ENST00000463615 H2AFB1P0C5Y9 115 aa13.63□□□□□ -0.23
PDLIM4-205ENST00000463615 NIT1Q86X76 327 aa13.63□□□□□ -0.23
PDLIM4-205ENST00000463615 BAGE2Q86Y30 109 aa13.63□□□□□ -0.23
PDLIM4-205ENST00000463615 OR10G8Q8NGN5 311 aa13.63□□□□□ -0.23
PDLIM4-205ENST00000463615 COX11Q9Y6N1 276 aa13.63□□□□□ -0.23
PDLIM4-205ENST00000463615 SNAI2O43623 268 aa13.62□□□□□ -0.23
PDLIM4-205ENST00000463615 UBE2D3P61077 147 aa13.62□□□□□ -0.23
PDLIM4-205ENST00000463615 UBE2D2P62837 147 aa13.62□□□□□ -0.23
PDLIM4-205ENST00000463615 FRZBQ92765 325 aa13.62□□□□□ -0.23
PDLIM4-205ENST00000463615 TRBV7-3A0A075B6L6 115 aa13.61□□□□□ -0.23
PDLIM4-205ENST00000463615 TRAV1-1A0A0B4J248 108 aa13.61□□□□□ -0.23
PDLIM4-205ENST00000463615 OR5AL1P0C617 328 aa13.61□□□□□ -0.23
PDLIM4-205ENST00000463615 RPL36AP83881 106 aaKnown RBP13.61□□□□□ -0.23
PDLIM4-205ENST00000463615 Q5VSD8 79 aa13.61□□□□□ -0.23
PDLIM4-205ENST00000463615 RPL36ALQ969Q0 106 aaKnown RBP13.61□□□□□ -0.23
PDLIM4-205ENST00000463615 RAB4BP61018 213 aa13.6□□□□□ -0.23
PDLIM4-205ENST00000463615 WFDC2Q14508 124 aa13.6□□□□□ -0.23
PDLIM4-205ENST00000463615 PRR27Q6MZM9 219 aa13.6□□□□□ -0.23
PDLIM4-205ENST00000463615 TMUB2Q71RG4 321 aa13.6□□□□□ -0.23
PDLIM4-205ENST00000463615 C11orf52Q96A22 123 aa13.6□□□□□ -0.23
PDLIM4-205ENST00000463615 A0A1B0GV50 99 aa13.59□□□□□ -0.23
PDLIM4-205ENST00000463615 RPL19P84098 196 aaKnown RBP13.59□□□□□ -0.23
PDLIM4-205ENST00000463615 OR10AG1Q8NH19 301 aa13.59□□□□□ -0.23
PDLIM4-205ENST00000463615 RMI2Q96E14 147 aa13.59□□□□□ -0.23
PDLIM4-205ENST00000463615 MANBALQ9NQG1 85 aa13.59□□□□□ -0.23
PDLIM4-205ENST00000463615 VPS13BQ7Z7G8 4022 aa13.58□□□□□ -0.24
PDLIM4-205ENST00000463615 RAB5CP51148 216 aa13.58□□□□□ -0.24
PDLIM4-205ENST00000463615 URGCP-MRPS24S4R325 110 aa13.58□□□□□ -0.24
PDLIM4-205ENST00000463615 INAFM2P0DMQ5 153 aa13.57□□□□□ -0.24
PDLIM4-205ENST00000463615 ELOBQ15370 118 aa13.57□□□□□ -0.24
PDLIM4-205ENST00000463615 ATRAIDQ6UW56 229 aa13.57□□□□□ -0.24
PDLIM4-205ENST00000463615 RPL35P42766 123 aaKnown RBP13.56□□□□□ -0.24
PDLIM4-205ENST00000463615 Q6ZSA8 131 aa13.56□□□□□ -0.24
PDLIM4-205ENST00000463615 CCL20P78556 96 aa13.55□□□□□ -0.24
PDLIM4-205ENST00000463615 NEXN-AS1Q8NBZ9 246 aa13.55□□□□□ -0.24
PDLIM4-205ENST00000463615 FAM30AQ9NZY2 134 aa13.55□□□□□ -0.24
PDLIM4-205ENST00000463615 A0A087WX48 190 aa13.54□□□□□ -0.24
PDLIM4-205ENST00000463615 TRBV6-8A0A0A6YYG3 113 aa13.54□□□□□ -0.24
PDLIM4-205ENST00000463615 EIF5AL1Q6IS14 154 aaKnown RBP13.54□□□□□ -0.24
PDLIM4-205ENST00000463615 SMIM12Q96EX1 92 aa13.54□□□□□ -0.24
PDLIM4-205ENST00000463615 KLK12Q9UKR0 248 aa13.54□□□□□ -0.24
PDLIM4-205ENST00000463615 KIF25-AS1Q9Y6Z4 181 aa13.54□□□□□ -0.24
PDLIM4-205ENST00000463615 FAM229AH3BQW9 127 aa13.53□□□□□ -0.24
PDLIM4-205ENST00000463615 SMR3BP02814 79 aaPredicted RBP13.53□□□□□ -0.24
PDLIM4-205ENST00000463615 ZNF56Q15929 161 aa13.53□□□□□ -0.24
PDLIM4-205ENST00000463615 SPANXN1Q5VSR9 72 aa13.53□□□□□ -0.24
PDLIM4-205ENST00000463615 DERL1Q9BUN8 251 aa13.53□□□□□ -0.24
PDLIM4-205ENST00000463615 GNG13Q9P2W3 67 aa13.53□□□□□ -0.24
PDLIM4-205ENST00000463615 VAX2Q9UIW0 290 aa13.53□□□□□ -0.24
PDLIM4-205ENST00000463615 IGLV2-8P01709 118 aa13.52□□□□□ -0.25
PDLIM4-205ENST00000463615 Q0VG73 95 aa13.52□□□□□ -0.25
PDLIM4-205ENST00000463615 KCNIP4Q6PIL6 250 aa13.52□□□□□ -0.25
PDLIM4-205ENST00000463615 Q8N976 141 aa13.52□□□□□ -0.25
PDLIM4-205ENST00000463615 BAALCQ8WXS3 180 aa13.52□□□□□ -0.25
PDLIM4-205ENST00000463615 DMBT1Q9UGM3 2413 aaPredicted RBP13.51□□□□□ -0.25
PDLIM4-205ENST00000463615 TEX46H3BTG2 121 aa13.51□□□□□ -0.25
PDLIM4-205ENST00000463615 SULT1A2P50226 295 aa13.51□□□□□ -0.25
PDLIM4-205ENST00000463615 UBE2WQ96B02 151 aa13.51□□□□□ -0.25
PDLIM4-205ENST00000463615 DNAJC30Q96LL9 226 aa13.51□□□□□ -0.25
PDLIM4-205ENST00000463615 SRRM2Q9UQ35 2752 aaKnown RBP13.51□□□□□ -0.25
PDLIM4-205ENST00000463615 IGKV2D-24A0A075B6R9 120 aa13.5□□□□□ -0.25
PDLIM4-205ENST00000463615 C19orf71A6NCJ1 209 aa13.5□□□□□ -0.25
PDLIM4-205ENST00000463615 LECT2O14960 151 aa13.5□□□□□ -0.25
PDLIM4-205ENST00000463615 IGLC6P0CF74 106 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms