RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 TM2D2Q9BX73 214 aa3.56□□□□□ -1.84
VPS72-203ENST00000463470 MSRB1Q9NZV6 116 aa3.56□□□□□ -1.84
VPS72-203ENST00000463470 HHLA3Q9XRX5 114 aa3.56□□□□□ -1.84
VPS72-203ENST00000463470 CYSLTR1Q9Y271 337 aa3.56□□□□□ -1.84
VPS72-203ENST00000463470 SONP18583 2426 aaKnown RBP3.56□□□□□ -1.84
VPS72-203ENST00000463470 CUBNO60494 3623 aa3.56□□□□□ -1.84
VPS72-203ENST00000463470 IGHV3OR16-13A0A075B7E8 117 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 A0A096LNT2 108 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 IGHV3-74A0A0B4J1X5 117 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 IGHV3-66A0A0C4DH42 116 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 TRBV6-5A0A0K0K1A5 114 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 OR11H12B2RN74 326 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 SMKR1H3BMG3 65 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 J3QR89 54 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 LY6G6DO95868 133 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 IGHV4-38-2P0DP08 117 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 PSMB8P28062 276 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 RNASE4P34096 147 aaKnown RBP3.55□□□□□ -1.84
VPS72-203ENST00000463470 CDKN1BP46527 198 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 CRYBA4P53673 196 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 LOXL1Q08397 574 aaPredicted RBP3.55□□□□□ -1.84
VPS72-203ENST00000463470 ANXA2RQ3ZCQ2 193 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 Q5PR19 223 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 ZC2HC1BQ5TFG8 222 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 LYRM7Q5U5X0 104 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 BRD3OSQ6XYD6 125 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 ZNF575Q86XF7 245 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 OR11H1Q8NG94 326 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 OR11H2Q8NH07 326 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 UBE2E2Q96LR5 201 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 TIMM17AQ99595 171 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 C11orf21Q9P2W6 132 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 VPREB3Q9UKI3 123 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 CHTOPQ9Y3Y2 248 aaKnown RBP3.55□□□□□ -1.84
VPS72-203ENST00000463470 ANK2Q01484 3957 aa3.55□□□□□ -1.84
VPS72-203ENST00000463470 IGHV3OR16-8A0A075B7F1 116 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 IGHV4-30-2A0A087WSY4 118 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 IGHV3-49A0A0A0MS15 119 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 GAGE12BA1L429 117 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 CBY3A6NI87 242 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 K7EP34 96 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 LGALS1P09382 135 aaKnown RBP3.54□□□□□ -1.84
VPS72-203ENST00000463470 CMC4P56277 68 aaPredicted RBP3.54□□□□□ -1.84
VPS72-203ENST00000463470 SCGB2A2Q13296 93 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 RHOHQ15669 191 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 LY6EQ16553 131 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 AMMECR1LQ6DCA0 310 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 C2orf66Q6UXQ4 117 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 UNQ9165/PRO28630Q6UXU0 137 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 FOXI2Q6ZQN5 318 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 TMEM86BQ8N661 226 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 NEXN-AS1Q8NBZ9 246 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 DCANP1Q8TF63 244 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 PTH2Q96A98 100 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 C20orf173Q96LM9 149 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 C18orf15Q96N68 181 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 CHAC1Q9BUX1 264 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 EDA2RQ9HAV5 297 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 TMEM160Q9NX00 188 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 PEMTQ9UBM1 199 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 DKK2Q9UBU2 259 aa3.54□□□□□ -1.84
VPS72-203ENST00000463470 TRBV25-1A0A075B6N4 114 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 IGHV1OR15-1A0A075B7D0 117 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 A0A0J9YX75 114 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 TRBV27A0A0K0K1C4 114 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 MYMXA0A1B0GTQ4 84 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 A0A1W2PPM0 123 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 E9PLD3 99 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 F8W1H4 67 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 K7EQG2 157 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 CRLF1O75462 422 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 IGHV3-11P01762 117 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 MGPP08493 103 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 RNASE3P12724 160 aaKnown RBP3.53□□□□□ -1.84
VPS72-203ENST00000463470 GCSHP23434 173 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 POLR2KP53803 58 aaKnown RBP3.53□□□□□ -1.84
VPS72-203ENST00000463470 BLCAPP62952 87 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 SMAGPQ0VAQ4 97 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 PMVKQ15126 192 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 OCIAD2Q56VL3 154 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 UFSP1Q6NVU6 142 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 Q71RC1 249 aaPredicted RBP3.53□□□□□ -1.84
VPS72-203ENST00000463470 TRPT1Q86TN4 253 aaKnown RBP3.53□□□□□ -1.84
VPS72-203ENST00000463470 PCP2Q8IVA1 136 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 CEND1Q8N111 149 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 C14orf178Q8N769 122 aaPredicted RBP3.53□□□□□ -1.84
VPS72-203ENST00000463470 SPATA3Q8NHX4 192 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 RASL10AQ92737 203 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 Q96MF0 132 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 CSTL1Q9H114 145 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 CST9LQ9H4G1 147 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 MRPL35Q9NZE8 188 aaKnown RBP3.53□□□□□ -1.84
VPS72-203ENST00000463470 MGAM2Q2M2H8 2515 aa3.53□□□□□ -1.84
VPS72-203ENST00000463470 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.52□□□□□ -1.85
VPS72-203ENST00000463470 IGHV3OR16-10A0A075B7F0 116 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 TRAV25A0A0B4J276 109 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 C11orf86A6NJI1 115 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 INAFM1C9JVW0 142 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 F5H697 171 aa3.52□□□□□ -1.85
VPS72-203ENST00000463470 H3BUT2 72 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms