RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 LINC01545Q5VT33 79 aa9.41□□□□□ -0.9
VAPB-203ENST00000463370 PRSS47A8MTI9 375 aa9.41□□□□□ -0.9
VAPB-203ENST00000463370 DEFB125Q8N687 156 aa9.41□□□□□ -0.9
VAPB-203ENST00000463370 TMEM158Q8WZ71 300 aa9.41□□□□□ -0.9
VAPB-203ENST00000463370 EREGO14944 169 aa9.4□□□□□ -0.9
VAPB-203ENST00000463370 VWFP04275 2813 aa9.4□□□□□ -0.91
VAPB-203ENST00000463370 JMJD1CQ15652 2540 aa9.4□□□□□ -0.91
VAPB-203ENST00000463370 CBY3A6NI87 242 aa9.39□□□□□ -0.91
VAPB-203ENST00000463370 SAP30O75446 220 aa9.39□□□□□ -0.91
VAPB-203ENST00000463370 FCER1GP30273 86 aa9.39□□□□□ -0.91
VAPB-203ENST00000463370 POM121L12Q8N7R1 296 aa9.39□□□□□ -0.91
VAPB-203ENST00000463370 C20orf202A1L168 122 aa9.39□□□□□ -0.91
VAPB-203ENST00000463370 SUMO2P61956 95 aaKnown RBP9.39□□□□□ -0.91
VAPB-203ENST00000463370 FAM74A4Q5TZK3 123 aa9.39□□□□□ -0.91
VAPB-203ENST00000463370 DEFB104AQ8WTQ1 72 aa9.39□□□□□ -0.91
VAPB-203ENST00000463370 IFI27L1Q96BM0 104 aa9.39□□□□□ -0.91
VAPB-203ENST00000463370 SMIM2Q9BVW6 85 aa9.39□□□□□ -0.91
VAPB-203ENST00000463370 TENM1Q9UKZ4 2725 aa9.39□□□□□ -0.91
VAPB-203ENST00000463370 TRAV25A0A0B4J276 109 aa9.38□□□□□ -0.91
VAPB-203ENST00000463370 SUMO4Q6EEV6 95 aa9.38□□□□□ -0.91
VAPB-203ENST00000463370 NEGR1Q7Z3B1 354 aa9.38□□□□□ -0.91
VAPB-203ENST00000463370 C2CD3Q4AC94 2353 aa9.38□□□□□ -0.91
VAPB-203ENST00000463370 FLNBO75369 2602 aaKnown RBP9.38□□□□□ -0.91
VAPB-203ENST00000463370 JMJD8Q96S16 334 aa9.38□□□□□ -0.91
VAPB-203ENST00000463370 SNHG12Q9BXW3 62 aa9.38□□□□□ -0.91
VAPB-203ENST00000463370 SMIM17P0DL12 118 aa9.37□□□□□ -0.91
VAPB-203ENST00000463370 LAGE3Q14657 143 aa9.37□□□□□ -0.91
VAPB-203ENST00000463370 ZNF876PQ49A33 203 aa9.37□□□□□ -0.91
VAPB-203ENST00000463370 WFDC10AQ9H1F0 79 aa9.37□□□□□ -0.91
VAPB-203ENST00000463370 CRYGDP07320 174 aa9.37□□□□□ -0.91
VAPB-203ENST00000463370 XCL2Q9UBD3 114 aa9.36□□□□□ -0.91
VAPB-203ENST00000463370 DKK2Q9UBU2 259 aa9.36□□□□□ -0.91
VAPB-203ENST00000463370 TRGV11A0A075B6L2 103 aa9.36□□□□□ -0.91
VAPB-203ENST00000463370 OR11H12B2RN74 326 aa9.36□□□□□ -0.91
VAPB-203ENST00000463370 F5H697 171 aa9.36□□□□□ -0.91
VAPB-203ENST00000463370 C20orf78Q9BR46 151 aa9.36□□□□□ -0.91
VAPB-203ENST00000463370 UQCR10Q9UDW1 63 aa9.36□□□□□ -0.91
VAPB-203ENST00000463370 IGLV1-51P01701 117 aa9.35□□□□□ -0.91
VAPB-203ENST00000463370 Q6ZN92 141 aa9.35□□□□□ -0.91
VAPB-203ENST00000463370 CSTL1Q9H114 145 aa9.35□□□□□ -0.91
VAPB-203ENST00000463370 GOLT1BQ9Y3E0 138 aa9.35□□□□□ -0.91
VAPB-203ENST00000463370 LGALS9BQ3B8N2 356 aa9.35□□□□□ -0.91
VAPB-203ENST00000463370 LGALS9CQ6DKI2 356 aa9.35□□□□□ -0.91
VAPB-203ENST00000463370 MORN3Q6PF18 240 aaPredicted RBP9.35□□□□□ -0.91
VAPB-203ENST00000463370 STHQ8IWL8 128 aa9.35□□□□□ -0.91
VAPB-203ENST00000463370 SYT8Q8NBV8 401 aa9.35□□□□□ -0.91
VAPB-203ENST00000463370 TRRAPQ9Y4A5 3859 aa9.34□□□□□ -0.91
VAPB-203ENST00000463370 NUDT3O95989 172 aa9.34□□□□□ -0.91
VAPB-203ENST00000463370 TCTAP57738 103 aa9.34□□□□□ -0.91
VAPB-203ENST00000463370 TRPT1Q86TN4 253 aaKnown RBP9.34□□□□□ -0.91
VAPB-203ENST00000463370 SPATA3Q8NHX4 192 aa9.34□□□□□ -0.91
VAPB-203ENST00000463370 LINC01587Q99440 93 aa9.34□□□□□ -0.91
VAPB-203ENST00000463370 ZNF56Q15929 161 aa9.34□□□□□ -0.91
VAPB-203ENST00000463370 IGHV3-73A0A0B4J1V6 119 aa9.33□□□□□ -0.92
VAPB-203ENST00000463370 INSP01308 110 aa9.33□□□□□ -0.92
VAPB-203ENST00000463370 AZU1P20160 251 aa9.33□□□□□ -0.92
VAPB-203ENST00000463370 STPG4Q8N801 248 aa9.33□□□□□ -0.92
VAPB-203ENST00000463370 C11orf72Q8NBR9 251 aa9.33□□□□□ -0.92
VAPB-203ENST00000463370 ST20Q9HBF5 79 aa9.33□□□□□ -0.92
VAPB-203ENST00000463370 M0QY20 66 aa9.32□□□□□ -0.92
VAPB-203ENST00000463370 ODF1Q14990 250 aa9.32□□□□□ -0.92
VAPB-203ENST00000463370 ANKRD39Q53RE8 183 aa9.32□□□□□ -0.92
VAPB-203ENST00000463370 NDUFA11Q86Y39 141 aa9.32□□□□□ -0.92
VAPB-203ENST00000463370 C1orf158Q8N1D5 194 aa9.32□□□□□ -0.92
VAPB-203ENST00000463370 C19orf73Q9NVV2 129 aa9.32□□□□□ -0.92
VAPB-203ENST00000463370 IGHV3OR16-12A0A075B7B8 117 aa9.32□□□□□ -0.92
VAPB-203ENST00000463370 M0R143 59 aa9.32□□□□□ -0.92
VAPB-203ENST00000463370 PRSS1P07477 247 aa9.32□□□□□ -0.92
VAPB-203ENST00000463370 POLR2KP53803 58 aaKnown RBP9.32□□□□□ -0.92
VAPB-203ENST00000463370 HSBP1L1C9JCN9 74 aa9.31□□□□□ -0.92
VAPB-203ENST00000463370 HNRNPA3P51991 378 aaKnown RBP9.31□□□□□ -0.92
VAPB-203ENST00000463370 CLUHP3Q96NS8 147 aa9.31□□□□□ -0.92
VAPB-203ENST00000463370 A0A1B0GV90 55 aa9.31□□□□□ -0.92
VAPB-203ENST00000463370 SDHAF1A6NFY7 115 aa9.31□□□□□ -0.92
VAPB-203ENST00000463370 GIG44P09565 113 aaPredicted RBP9.31□□□□□ -0.92
VAPB-203ENST00000463370 ORMDL2Q53FV1 153 aa9.31□□□□□ -0.92
VAPB-203ENST00000463370 LINC00482Q8N8I6 264 aa9.31□□□□□ -0.92
VAPB-203ENST00000463370 C2orf88Q9BSF0 95 aa9.31□□□□□ -0.92
VAPB-203ENST00000463370 CRLF1O75462 422 aa9.3□□□□□ -0.92
VAPB-203ENST00000463370 PPP1R17O96001 155 aa9.3□□□□□ -0.92
VAPB-203ENST00000463370 P0DMU3 169 aa9.3□□□□□ -0.92
VAPB-203ENST00000463370 FAM231AP0DMU4 169 aa9.3□□□□□ -0.92
VAPB-203ENST00000463370 FAM231CP0DMU5 169 aa9.3□□□□□ -0.92
VAPB-203ENST00000463370 BATFQ16520 125 aa9.3□□□□□ -0.92
VAPB-203ENST00000463370 BEAN1Q3B7T3 259 aa9.3□□□□□ -0.92
VAPB-203ENST00000463370 TOMM6Q96B49 74 aa9.3□□□□□ -0.92
VAPB-203ENST00000463370 Q9UF83 564 aa9.3□□□□□ -0.92
VAPB-203ENST00000463370 PF4P02776 101 aa9.3□□□□□ -0.92
VAPB-203ENST00000463370 MRPL16Q9NX20 251 aaKnown RBP9.3□□□□□ -0.92
VAPB-203ENST00000463370 M0R2P5 195 aa9.29□□□□□ -0.92
VAPB-203ENST00000463370 ZNF415Q09FC8 603 aa9.29□□□□□ -0.92
VAPB-203ENST00000463370 UFSP1Q6NVU6 142 aa9.29□□□□□ -0.92
VAPB-203ENST00000463370 C2orf66Q6UXQ4 117 aa9.29□□□□□ -0.92
VAPB-203ENST00000463370 Q6ZSN1 163 aa9.29□□□□□ -0.92
VAPB-203ENST00000463370 LINC00467Q9BRT7 94 aa9.29□□□□□ -0.92
VAPB-203ENST00000463370 TMEM208Q9BTX3 173 aa9.29□□□□□ -0.92
VAPB-203ENST00000463370 ATP5LO75964 103 aa9.29□□□□□ -0.92
VAPB-203ENST00000463370 RPL35AP18077 110 aaKnown RBP9.29□□□□□ -0.92
VAPB-203ENST00000463370 TRBV6-5A0A0K0K1A5 114 aa9.28□□□□□ -0.92
VAPB-203ENST00000463370 FOSL1P15407 271 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms