RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 OR4C5Q8NGB2 326 aa13.3□□□□□ -0.28
VARS-221ENST00000463184 SMIM12Q96EX1 92 aa13.3□□□□□ -0.28
VARS-221ENST00000463184 SH2D1AO60880 128 aa13.29□□□□□ -0.28
VARS-221ENST00000463184 TYMSP04818 313 aa13.29□□□□□ -0.28
VARS-221ENST00000463184 GNG4P50150 75 aa13.29□□□□□ -0.28
VARS-221ENST00000463184 TIRAPP58753 221 aa13.29□□□□□ -0.28
VARS-221ENST00000463184 FLG2Q5D862 2391 aaPredicted RBP13.29□□□□□ -0.28
VARS-221ENST00000463184 IGHV3-16A0A0C4DH30 117 aa13.28□□□□□ -0.28
VARS-221ENST00000463184 IGHV3-38A0A0C4DH36 116 aa13.28□□□□□ -0.28
VARS-221ENST00000463184 LRCOL1A6NCL2 159 aa13.28□□□□□ -0.28
VARS-221ENST00000463184 M0R2P5 195 aa13.28□□□□□ -0.28
VARS-221ENST00000463184 IFITM2Q01629 132 aa13.28□□□□□ -0.28
VARS-221ENST00000463184 Q6ZSN1 163 aa13.28□□□□□ -0.28
VARS-221ENST00000463184 SRRM2Q9UQ35 2752 aaKnown RBP13.28□□□□□ -0.28
VARS-221ENST00000463184 IGKV3D-20A0A0C4DH25 116 aa13.27□□□□□ -0.29
VARS-221ENST00000463184 IGLV2-8P01709 118 aa13.27□□□□□ -0.29
VARS-221ENST00000463184 LINC01556Q5JQF7 62 aa13.27□□□□□ -0.29
VARS-221ENST00000463184 PARLQ9H300 379 aa13.27□□□□□ -0.29
VARS-221ENST00000463184 LOC100131303A0A0U1RQF7 123 aa13.26□□□□□ -0.29
VARS-221ENST00000463184 SRP19P09132 144 aaKnown RBP13.26□□□□□ -0.29
VARS-221ENST00000463184 SMDT1Q9H4I9 107 aa13.26□□□□□ -0.29
VARS-221ENST00000463184 TRBV20OR9-2A0A075B6H5 130 aa13.25□□□□□ -0.29
VARS-221ENST00000463184 IBA57-AS1B1ANH7 110 aa13.25□□□□□ -0.29
VARS-221ENST00000463184 B4DEV8 164 aa13.25□□□□□ -0.29
VARS-221ENST00000463184 KRBOX1C9JBD0 128 aa13.25□□□□□ -0.29
VARS-221ENST00000463184 HAMPP81172 84 aa13.25□□□□□ -0.29
VARS-221ENST00000463184 PEA15Q15121 130 aa13.25□□□□□ -0.29
VARS-221ENST00000463184 LINC01559Q495D7 138 aa13.25□□□□□ -0.29
VARS-221ENST00000463184 CLLU1Q5K131 121 aa13.25□□□□□ -0.29
VARS-221ENST00000463184 PRR27Q6MZM9 219 aa13.25□□□□□ -0.29
VARS-221ENST00000463184 BIN3Q9NQY0 253 aa13.25□□□□□ -0.29
VARS-221ENST00000463184 M0R036 132 aa13.24□□□□□ -0.29
VARS-221ENST00000463184 MGST1P10620 155 aaKnown RBP13.24□□□□□ -0.29
VARS-221ENST00000463184 GATA1P15976 413 aaPredicted RBP13.24□□□□□ -0.29
VARS-221ENST00000463184 CEBPGP53567 150 aa13.24□□□□□ -0.29
VARS-221ENST00000463184 Q8N814 137 aa13.24□□□□□ -0.29
VARS-221ENST00000463184 TRAV8-6A0A0B4J262 113 aa13.23□□□□□ -0.29
VARS-221ENST00000463184 ASIPP42127 132 aa13.23□□□□□ -0.29
VARS-221ENST00000463184 DNLZQ5SXM8 178 aa13.23□□□□□ -0.29
VARS-221ENST00000463184 PGPEP1LA6NFU8 196 aa13.22□□□□□ -0.29
VARS-221ENST00000463184 S100A4P26447 101 aaKnown RBP13.22□□□□□ -0.29
VARS-221ENST00000463184 OCC1Q8TAD7 63 aa13.22□□□□□ -0.29
VARS-221ENST00000463184 DAZAP1Q96EP5 407 aaKnown RBP13.22□□□□□ -0.29
VARS-221ENST00000463184 C9orf85Q96MD7 179 aa13.22□□□□□ -0.29
VARS-221ENST00000463184 CIDEAO60543 219 aa13.21□□□□□ -0.29
VARS-221ENST00000463184 RNASE3P12724 160 aaKnown RBP13.21□□□□□ -0.29
VARS-221ENST00000463184 SRSF3P84103 164 aaKnown RBP13.21□□□□□ -0.29
VARS-221ENST00000463184 OR10J3Q5JRS4 329 aa13.21□□□□□ -0.29
VARS-221ENST00000463184 SMIM7Q9BQ49 75 aa13.21□□□□□ -0.29
VARS-221ENST00000463184 TMSB15BA0A087X1C1 80 aa13.2□□□□□ -0.3
VARS-221ENST00000463184 GRIFINA4D1Z8 144 aa13.2□□□□□ -0.3
VARS-221ENST00000463184 J3QL48 77 aa13.2□□□□□ -0.3
VARS-221ENST00000463184 SLC25A29Q8N8R3 303 aa13.2□□□□□ -0.3
VARS-221ENST00000463184 PRADC1Q9BSG0 188 aa13.2□□□□□ -0.3
VARS-221ENST00000463184 Q9HAA7 133 aa13.2□□□□□ -0.3
VARS-221ENST00000463184 IL36BQ9NZH7 164 aa13.2□□□□□ -0.3
VARS-221ENST00000463184 FAM30AQ9NZY2 134 aa13.2□□□□□ -0.3
VARS-221ENST00000463184 C19orf71A6NCJ1 209 aa13.19□□□□□ -0.3
VARS-221ENST00000463184 ZNF727A8MUV8 499 aa13.19□□□□□ -0.3
VARS-221ENST00000463184 C9JQL5 133 aa13.19□□□□□ -0.3
VARS-221ENST00000463184 CXCL1P09341 107 aa13.19□□□□□ -0.3
VARS-221ENST00000463184 FAM74A3Q4VXF1 159 aa13.19□□□□□ -0.3
VARS-221ENST00000463184 PTH2Q96A98 100 aa13.19□□□□□ -0.3
VARS-221ENST00000463184 TRBV6-4A0A1B0GX49 114 aa13.18□□□□□ -0.3
VARS-221ENST00000463184 RPL19P84098 196 aaKnown RBP13.18□□□□□ -0.3
VARS-221ENST00000463184 RHOHQ15669 191 aa13.18□□□□□ -0.3
VARS-221ENST00000463184 LELP1Q5T871 98 aa13.18□□□□□ -0.3
VARS-221ENST00000463184 H3BVH4 76 aa13.17□□□□□ -0.3
VARS-221ENST00000463184 K7EN84 100 aa13.17□□□□□ -0.3
VARS-221ENST00000463184 P01737 135 aa13.17□□□□□ -0.3
VARS-221ENST00000463184 IGHV3-30P01768 117 aa13.17□□□□□ -0.3
VARS-221ENST00000463184 IGHV3-33P01772 117 aa13.17□□□□□ -0.3
VARS-221ENST00000463184 ARMS2P0C7Q2 107 aa13.17□□□□□ -0.3
VARS-221ENST00000463184 IGHV3-30-3P0DP02 117 aa13.17□□□□□ -0.3
VARS-221ENST00000463184 IGHV3-30-5P0DP03 117 aa13.17□□□□□ -0.3
VARS-221ENST00000463184 ZNF876PQ49A33 203 aa13.17□□□□□ -0.3
VARS-221ENST00000463184 TM2D2Q9BX73 214 aa13.17□□□□□ -0.3
VARS-221ENST00000463184 RS1O15537 224 aa13.16□□□□□ -0.3
VARS-221ENST00000463184 PLA2G1BP04054 148 aaKnown RBP13.16□□□□□ -0.3
VARS-221ENST00000463184 RPS20P60866 119 aaKnown RBP13.16□□□□□ -0.3
VARS-221ENST00000463184 LAGE3Q14657 143 aa13.16□□□□□ -0.3
VARS-221ENST00000463184 CFAP126Q5VTH2 177 aa13.16□□□□□ -0.3
VARS-221ENST00000463184 NUDT10Q8NFP7 164 aa13.16□□□□□ -0.3
VARS-221ENST00000463184 OR2D3Q8NGH3 330 aa13.16□□□□□ -0.3
VARS-221ENST00000463184 NUDT11Q96G61 164 aa13.16□□□□□ -0.3
VARS-221ENST00000463184 GTSF1LQ9H1H1 148 aa13.16□□□□□ -0.3
VARS-221ENST00000463184 TMEM241Q24JQ0 296 aa13.15□□□□□ -0.3
VARS-221ENST00000463184 PIK3CD-AS1Q5SR53 167 aa13.15□□□□□ -0.3
VARS-221ENST00000463184 XKRY2A2RUG3 117 aa13.14□□□□□ -0.31
VARS-221ENST00000463184 LINC01551Q86U37 167 aa13.14□□□□□ -0.31
VARS-221ENST00000463184 ATP6V0E2Q8NHE4 81 aa13.14□□□□□ -0.31
VARS-221ENST00000463184 PHLDA3Q9Y5J5 127 aa13.14□□□□□ -0.31
VARS-221ENST00000463184 DNAH8Q96JB1 4490 aa13.14□□□□□ -0.31
VARS-221ENST00000463184 FAM231DQ6ZW35 169 aa13.13□□□□□ -0.31
VARS-221ENST00000463184 SYT8Q8NBV8 401 aa13.13□□□□□ -0.31
VARS-221ENST00000463184 SSBP4Q9BWG4 385 aaPredicted RBP13.13□□□□□ -0.31
VARS-221ENST00000463184 RNASE7Q9H1E1 156 aaKnown RBP13.13□□□□□ -0.31
VARS-221ENST00000463184 NAT8Q9UHE5 227 aa13.13□□□□□ -0.31
VARS-221ENST00000463184 IGHV3-73A0A0B4J1V6 119 aa13.12□□□□□ -0.31
VARS-221ENST00000463184 SNAI2O43623 268 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms