RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 SAMD10Q9BYL1 202 aa10.18□□□□□ -0.78
COL6A1-202ENST00000463060 TMEM191AQ9H0A3 160 aa10.18□□□□□ -0.78
COL6A1-202ENST00000463060 TEX48A0A1B0GUV7 120 aa10.17□□□□□ -0.78
COL6A1-202ENST00000463060 A8MWV9 139 aa10.17□□□□□ -0.78
COL6A1-202ENST00000463060 TRAV4A0A0B4J268 109 aa10.16□□□□□ -0.78
COL6A1-202ENST00000463060 TRGC1P0CF51 173 aa10.16□□□□□ -0.78
COL6A1-202ENST00000463060 CAMPP49913 170 aa10.16□□□□□ -0.78
COL6A1-202ENST00000463060 C12orf74Q32Q52 190 aa10.16□□□□□ -0.78
COL6A1-202ENST00000463060 TMEM136Q6ZRR5 245 aa10.16□□□□□ -0.78
COL6A1-202ENST00000463060 C14orf178Q8N769 122 aaPredicted RBP10.16□□□□□ -0.78
COL6A1-202ENST00000463060 FAM210BQ96KR6 192 aa10.16□□□□□ -0.78
COL6A1-202ENST00000463060 STAB2Q8WWQ8 2551 aa10.15□□□□□ -0.78
COL6A1-202ENST00000463060 S100A8P05109 93 aa10.15□□□□□ -0.78
COL6A1-202ENST00000463060 DEFB130BP0DP73 79 aa10.15□□□□□ -0.78
COL6A1-202ENST00000463060 DEFB130AP0DP74 79 aa10.15□□□□□ -0.78
COL6A1-202ENST00000463060 ZFP2Q6ZN57 461 aa10.15□□□□□ -0.78
COL6A1-202ENST00000463060 RNF185Q96GF1 192 aa10.15□□□□□ -0.78
COL6A1-202ENST00000463060 ZNF479Q96JC4 524 aa10.15□□□□□ -0.78
COL6A1-202ENST00000463060 AP1S3Q96PC3 154 aa10.15□□□□□ -0.78
COL6A1-202ENST00000463060 GNB1LQ9BYB4 327 aa10.15□□□□□ -0.78
COL6A1-202ENST00000463060 EDA2RQ9HAV5 297 aa10.15□□□□□ -0.78
COL6A1-202ENST00000463060 TRGV2A0A075B6R0 118 aa10.14□□□□□ -0.79
COL6A1-202ENST00000463060 A0A087WWL8 130 aa10.14□□□□□ -0.79
COL6A1-202ENST00000463060 CIDEAO60543 219 aa10.14□□□□□ -0.79
COL6A1-202ENST00000463060 DAD1P61803 113 aa10.14□□□□□ -0.79
COL6A1-202ENST00000463060 COX19Q49B96 90 aa10.14□□□□□ -0.79
COL6A1-202ENST00000463060 FAM104BQ5XKR9 115 aa10.14□□□□□ -0.79
COL6A1-202ENST00000463060 OR4C5Q8NGB2 326 aa10.14□□□□□ -0.79
COL6A1-202ENST00000463060 DPH3P1Q9H4G8 78 aa10.14□□□□□ -0.79
COL6A1-202ENST00000463060 U3KQK5 164 aa10.14□□□□□ -0.79
COL6A1-202ENST00000463060 RAB4AP20338 218 aa10.13□□□□□ -0.79
COL6A1-202ENST00000463060 FHL2Q14192 279 aa10.13□□□□□ -0.79
COL6A1-202ENST00000463060 Q6ZSN1 163 aa10.13□□□□□ -0.79
COL6A1-202ENST00000463060 SMIM15Q7Z3B0 74 aa10.12□□□□□ -0.79
COL6A1-202ENST00000463060 AMN1Q8IY45 258 aa10.12□□□□□ -0.79
COL6A1-202ENST00000463060 C11orf45Q8TAV5 145 aa10.12□□□□□ -0.79
COL6A1-202ENST00000463060 RHODO00212 210 aa10.11□□□□□ -0.79
COL6A1-202ENST00000463060 RAB5AP20339 215 aa10.11□□□□□ -0.79
COL6A1-202ENST00000463060 HOXA5P20719 270 aa10.11□□□□□ -0.79
COL6A1-202ENST00000463060 NANOS2P60321 138 aaKnown RBP10.11□□□□□ -0.79
COL6A1-202ENST00000463060 FRZBQ92765 325 aa10.11□□□□□ -0.79
COL6A1-202ENST00000463060 IGHV3-73A0A0B4J1V6 119 aa10.1□□□□□ -0.79
COL6A1-202ENST00000463060 IGHV3-53P01767 116 aa10.1□□□□□ -0.79
COL6A1-202ENST00000463060 HLA-DQA1P01909 254 aa10.1□□□□□ -0.79
COL6A1-202ENST00000463060 MT-ND6P03923 174 aa10.1□□□□□ -0.79
COL6A1-202ENST00000463060 ATP5G1P05496 136 aa10.1□□□□□ -0.79
COL6A1-202ENST00000463060 SMIM17P0DL12 118 aa10.1□□□□□ -0.79
COL6A1-202ENST00000463060 GATA1P15976 413 aaPredicted RBP10.1□□□□□ -0.79
COL6A1-202ENST00000463060 RAB4BP61018 213 aa10.1□□□□□ -0.79
COL6A1-202ENST00000463060 SLAQ13239 276 aa10.1□□□□□ -0.79
COL6A1-202ENST00000463060 MRPL51Q4U2R6 128 aaKnown RBP10.1□□□□□ -0.79
COL6A1-202ENST00000463060 FAM74A4Q5TZK3 123 aa10.1□□□□□ -0.79
COL6A1-202ENST00000463060 Q6ZTC4 211 aa10.1□□□□□ -0.79
COL6A1-202ENST00000463060 DNAH7Q8WXX0 4024 aa10.09□□□□□ -0.79
COL6A1-202ENST00000463060 PHOX2AO14813 284 aa10.09□□□□□ -0.79
COL6A1-202ENST00000463060 GAS8-AS1O95177 125 aa10.09□□□□□ -0.79
COL6A1-202ENST00000463060 M0QY20 66 aa10.08□□□□□ -0.8
COL6A1-202ENST00000463060 SUMO4Q6EEV6 95 aa10.08□□□□□ -0.8
COL6A1-202ENST00000463060 MRPL18Q9H0U6 180 aaKnown RBP10.08□□□□□ -0.8
COL6A1-202ENST00000463060 APCSP02743 223 aa10.07□□□□□ -0.8
COL6A1-202ENST00000463060 MGPP08493 103 aa10.07□□□□□ -0.8
COL6A1-202ENST00000463060 RPS10P46783 165 aaKnown RBP10.07□□□□□ -0.8
COL6A1-202ENST00000463060 SLC25A29Q8N8R3 303 aa10.07□□□□□ -0.8
COL6A1-202ENST00000463060 MRAP2Q96G30 205 aa10.07□□□□□ -0.8
COL6A1-202ENST00000463060 Q9UF83 564 aa10.07□□□□□ -0.8
COL6A1-202ENST00000463060 TRAPPC1Q9Y5R8 145 aa10.07□□□□□ -0.8
COL6A1-202ENST00000463060 TRAV26-2A0A0B4J265 109 aa10.06□□□□□ -0.8
COL6A1-202ENST00000463060 TRGV4A0A0C4DH28 118 aa10.06□□□□□ -0.8
COL6A1-202ENST00000463060 TRBV6-4A0A1B0GX49 114 aa10.06□□□□□ -0.8
COL6A1-202ENST00000463060 F5H697 171 aa10.06□□□□□ -0.8
COL6A1-202ENST00000463060 CRYBA4P53673 196 aa10.06□□□□□ -0.8
COL6A1-202ENST00000463060 FABP9Q0Z7S8 132 aa10.06□□□□□ -0.8
COL6A1-202ENST00000463060 ZNF56Q15929 161 aa10.06□□□□□ -0.8
COL6A1-202ENST00000463060 NRACQ8N912 160 aa10.06□□□□□ -0.8
COL6A1-202ENST00000463060 PRO0255Q9UI72 69 aa10.06□□□□□ -0.8
COL6A1-202ENST00000463060 HHLA3Q9XRX5 114 aa10.06□□□□□ -0.8
COL6A1-202ENST00000463060 DYNC2H1Q8NCM8 4307 aaKnown RBP10.06□□□□□ -0.8
COL6A1-202ENST00000463060 SMKR1H3BMG3 65 aa10.05□□□□□ -0.8
COL6A1-202ENST00000463060 PPBPP02775 128 aa10.05□□□□□ -0.8
COL6A1-202ENST00000463060 TRGC2P03986 189 aa10.05□□□□□ -0.8
COL6A1-202ENST00000463060 KIAA1644Q3SXP7 199 aa10.05□□□□□ -0.8
COL6A1-202ENST00000463060 VSIG2Q96IQ7 327 aa10.05□□□□□ -0.8
COL6A1-202ENST00000463060 D6R8Y8 96 aa10.04□□□□□ -0.8
COL6A1-202ENST00000463060 F5H768 121 aa10.04□□□□□ -0.8
COL6A1-202ENST00000463060 P0DMU3 169 aa10.04□□□□□ -0.8
COL6A1-202ENST00000463060 FAM231AP0DMU4 169 aa10.04□□□□□ -0.8
COL6A1-202ENST00000463060 FAM231CP0DMU5 169 aa10.04□□□□□ -0.8
COL6A1-202ENST00000463060 CKS2P33552 79 aa10.04□□□□□ -0.8
COL6A1-202ENST00000463060 ALKBH7Q9BT30 221 aaPredicted RBP10.04□□□□□ -0.8
COL6A1-202ENST00000463060 DEFB131BA0A096LNP1 70 aa10.03□□□□□ -0.8
COL6A1-202ENST00000463060 TRAV10A0A0B4J240 114 aa10.03□□□□□ -0.8
COL6A1-202ENST00000463060 TRBV10-1A0A0K0K1A3 114 aa10.03□□□□□ -0.8
COL6A1-202ENST00000463060 TRBV6-5A0A0K0K1A5 114 aa10.03□□□□□ -0.8
COL6A1-202ENST00000463060 K7EQD1 137 aa10.03□□□□□ -0.8
COL6A1-202ENST00000463060 NCR2O95944 276 aa10.03□□□□□ -0.8
COL6A1-202ENST00000463060 HTN3P15516 51 aa10.03□□□□□ -0.8
COL6A1-202ENST00000463060 ORMDL3Q8N138 153 aa10.03□□□□□ -0.8
COL6A1-202ENST00000463060 NEXN-AS1Q8NBZ9 246 aa10.03□□□□□ -0.8
COL6A1-202ENST00000463060 NIT2Q9NQR4 276 aa10.03□□□□□ -0.8
COL6A1-202ENST00000463060 PRSS47A8MTI9 375 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms