RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 TRAV8-1A0A0A6YYK1 113 aa5.81□□□□□ -1.48
USP4-207ENST00000462673 IGHV3-74A0A0B4J1X5 117 aa5.81□□□□□ -1.48
USP4-207ENST00000462673 IGHV3-66A0A0C4DH42 116 aa5.81□□□□□ -1.48
USP4-207ENST00000462673 IGLV2-11P01706 119 aa5.81□□□□□ -1.48
USP4-207ENST00000462673 IFI27P40305 119 aaPredicted RBP5.81□□□□□ -1.48
USP4-207ENST00000462673 NMUP48645 174 aa5.81□□□□□ -1.48
USP4-207ENST00000462673 PDE6HQ13956 83 aa5.81□□□□□ -1.48
USP4-207ENST00000462673 FAM104BQ5XKR9 115 aa5.81□□□□□ -1.48
USP4-207ENST00000462673 WFDC3Q8IUB2 231 aa5.81□□□□□ -1.48
USP4-207ENST00000462673 RAB37Q96AX2 223 aa5.81□□□□□ -1.48
USP4-207ENST00000462673 PRR25Q96S07 402 aa5.81□□□□□ -1.48
USP4-207ENST00000462673 SHANK2-AS3Q9BTD1 123 aa5.81□□□□□ -1.48
USP4-207ENST00000462673 CHAC1Q9BUX1 264 aa5.81□□□□□ -1.48
USP4-207ENST00000462673 TRBV19A0A075B6N1 114 aa5.8□□□□□ -1.48
USP4-207ENST00000462673 TMEM189A5PLL7 270 aa5.8□□□□□ -1.48
USP4-207ENST00000462673 H3BTX0 84 aa5.8□□□□□ -1.48
USP4-207ENST00000462673 SNAI2O43623 268 aa5.8□□□□□ -1.48
USP4-207ENST00000462673 GCSHP23434 173 aa5.8□□□□□ -1.48
USP4-207ENST00000462673 APOC4P55056 127 aa5.8□□□□□ -1.48
USP4-207ENST00000462673 TWIST1Q15672 202 aa5.8□□□□□ -1.48
USP4-207ENST00000462673 TAL2Q16559 108 aa5.8□□□□□ -1.48
USP4-207ENST00000462673 GLMPQ8WWB7 406 aa5.8□□□□□ -1.48
USP4-207ENST00000462673 C16orf92Q96LL3 132 aa5.8□□□□□ -1.48
USP4-207ENST00000462673 TPPP3Q9BW30 176 aa5.8□□□□□ -1.48
USP4-207ENST00000462673 AAMDCQ9H7C9 122 aa5.8□□□□□ -1.48
USP4-207ENST00000462673 ZMAT4Q9H898 229 aa5.8□□□□□ -1.48
USP4-207ENST00000462673 PKD1L1Q8TDX9 2849 aa5.8□□□□□ -1.48
USP4-207ENST00000462673 TRRAPQ9Y4A5 3859 aa5.79□□□□□ -1.48
USP4-207ENST00000462673 TEX48A0A1B0GUV7 120 aa5.79□□□□□ -1.48
USP4-207ENST00000462673 SH2D1AO60880 128 aa5.79□□□□□ -1.48
USP4-207ENST00000462673 ATP5LO75964 103 aa5.79□□□□□ -1.48
USP4-207ENST00000462673 IGHV4-30-4P0DP06 118 aa5.79□□□□□ -1.48
USP4-207ENST00000462673 RPL24P83731 157 aaKnown RBP5.79□□□□□ -1.48
USP4-207ENST00000462673 MRPL51Q4U2R6 128 aaKnown RBP5.79□□□□□ -1.48
USP4-207ENST00000462673 STHQ8IWL8 128 aa5.79□□□□□ -1.48
USP4-207ENST00000462673 Q8N1Y9 231 aa5.79□□□□□ -1.48
USP4-207ENST00000462673 EXOC3-AS1Q8N2X6 119 aa5.79□□□□□ -1.48
USP4-207ENST00000462673 B9D2Q9BPU9 175 aa5.79□□□□□ -1.48
USP4-207ENST00000462673 NAA38Q9BRA0 125 aaKnown RBP5.79□□□□□ -1.48
USP4-207ENST00000462673 NXT2Q9NPJ8 142 aaKnown RBP5.79□□□□□ -1.48
USP4-207ENST00000462673 VWFP04275 2813 aa5.78□□□□□ -1.48
USP4-207ENST00000462673 LOC389332A0A1B0GUA5 103 aa5.78□□□□□ -1.48
USP4-207ENST00000462673 LINC01546A6NGU7 62 aa5.78□□□□□ -1.48
USP4-207ENST00000462673 K7EIL1 84 aa5.78□□□□□ -1.48
USP4-207ENST00000462673 K7EQG2 157 aa5.78□□□□□ -1.48
USP4-207ENST00000462673 DPM2O94777 84 aa5.78□□□□□ -1.48
USP4-207ENST00000462673 IGKCP01834 107 aa5.78□□□□□ -1.48
USP4-207ENST00000462673 PRB2P02812 416 aaPredicted RBP5.78□□□□□ -1.48
USP4-207ENST00000462673 CD7P09564 240 aa5.78□□□□□ -1.48
USP4-207ENST00000462673 EDN2P20800 178 aa5.78□□□□□ -1.48
USP4-207ENST00000462673 CKS2P33552 79 aa5.78□□□□□ -1.48
USP4-207ENST00000462673 LYZL1Q6UWQ5 148 aa5.78□□□□□ -1.48
USP4-207ENST00000462673 FOXI2Q6ZQN5 318 aa5.78□□□□□ -1.48
USP4-207ENST00000462673 AMN1Q8IY45 258 aa5.78□□□□□ -1.48
USP4-207ENST00000462673 SIGMAR1Q99720 223 aa5.78□□□□□ -1.48
USP4-207ENST00000462673 SLC50A1Q9BRV3 221 aa5.78□□□□□ -1.48
USP4-207ENST00000462673 F8W1H4 67 aa5.77□□□□□ -1.49
USP4-207ENST00000462673 NPYP01303 97 aa5.77□□□□□ -1.49
USP4-207ENST00000462673 EVI2AP22794 236 aa5.77□□□□□ -1.49
USP4-207ENST00000462673 FCER1GP30273 86 aa5.77□□□□□ -1.49
USP4-207ENST00000462673 FXYD2P54710 66 aa5.77□□□□□ -1.49
USP4-207ENST00000462673 DEFB131AP59861 70 aa5.77□□□□□ -1.49
USP4-207ENST00000462673 ODF1Q14990 250 aa5.77□□□□□ -1.49
USP4-207ENST00000462673 MORN3Q6PF18 240 aaPredicted RBP5.77□□□□□ -1.49
USP4-207ENST00000462673 COX8CQ7Z4L0 72 aa5.77□□□□□ -1.49
USP4-207ENST00000462673 PCP2Q8IVA1 136 aa5.77□□□□□ -1.49
USP4-207ENST00000462673 CEND1Q8N111 149 aa5.77□□□□□ -1.49
USP4-207ENST00000462673 SVIPQ8NHG7 77 aa5.77□□□□□ -1.49
USP4-207ENST00000462673 KIR2DL5BQ8NHK3 375 aa5.77□□□□□ -1.49
USP4-207ENST00000462673 DCANP1Q8TF63 244 aa5.77□□□□□ -1.49
USP4-207ENST00000462673 ZNF479Q96JC4 524 aa5.77□□□□□ -1.49
USP4-207ENST00000462673 VGLL1Q99990 258 aa5.77□□□□□ -1.49
USP4-207ENST00000462673 SPATA25Q9BR10 227 aa5.77□□□□□ -1.49
USP4-207ENST00000462673 C1QTNF4Q9BXJ3 329 aa5.77□□□□□ -1.49
USP4-207ENST00000462673 C19orf73Q9NVV2 129 aa5.77□□□□□ -1.49
USP4-207ENST00000462673 NHP2Q9NX24 153 aaKnown RBP5.77□□□□□ -1.49
USP4-207ENST00000462673 MGAM2Q2M2H8 2515 aa5.76□□□□□ -1.49
USP4-207ENST00000462673 DUSP14O95147 198 aaKnown RBP5.76□□□□□ -1.49
USP4-207ENST00000462673 IGLC6P0CF74 106 aa5.76□□□□□ -1.49
USP4-207ENST00000462673 AZU1P20160 251 aa5.76□□□□□ -1.49
USP4-207ENST00000462673 LYRM7Q5U5X0 104 aa5.76□□□□□ -1.49
USP4-207ENST00000462673 ATP6V0E2Q8NHE4 81 aa5.76□□□□□ -1.49
USP4-207ENST00000462673 C8orf49Q96NF6 230 aa5.76□□□□□ -1.49
USP4-207ENST00000462673 TM2D2Q9BX73 214 aa5.76□□□□□ -1.49
USP4-207ENST00000462673 MAP6D1Q9H9H5 199 aa5.76□□□□□ -1.49
USP4-207ENST00000462673 SPANXB1Q9NS25 103 aaPredicted RBP5.76□□□□□ -1.49
USP4-207ENST00000462673 SELENOKQ9Y6D0 94 aa5.76□□□□□ -1.49
USP4-207ENST00000462673 SORL1Q92673 2214 aa5.75□□□□□ -1.49
USP4-207ENST00000462673 NOTCH3Q9UM47 2321 aa5.75□□□□□ -1.49
USP4-207ENST00000462673 TMSB15BA0A087X1C1 80 aa5.75□□□□□ -1.49
USP4-207ENST00000462673 GAGE12HA6NDE8 117 aa5.75□□□□□ -1.49
USP4-207ENST00000462673 E9PLD3 99 aa5.75□□□□□ -1.49
USP4-207ENST00000462673 MRPS12O15235 138 aaKnown RBP5.75□□□□□ -1.49
USP4-207ENST00000462673 ZNF688P0C7X2 276 aa5.75□□□□□ -1.49
USP4-207ENST00000462673 PLNP26678 52 aa5.75□□□□□ -1.49
USP4-207ENST00000462673 APRG1Q8IVJ8 170 aa5.75□□□□□ -1.49
USP4-207ENST00000462673 PHLDA1Q8WV24 401 aaPredicted RBP5.75□□□□□ -1.49
USP4-207ENST00000462673 CNFNQ9BYD5 112 aa5.75□□□□□ -1.49
USP4-207ENST00000462673 DKK2Q9UBU2 259 aa5.75□□□□□ -1.49
USP4-207ENST00000462673 TRBV25-1A0A075B6N4 114 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms