RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 SMUG1Q53HV7 270 aa9.51□□□□□ -0.89
APP-211ENST00000462267 FAM74A4Q5TZK3 123 aa9.51□□□□□ -0.89
APP-211ENST00000462267 OR5C1Q8NGR4 320 aa9.51□□□□□ -0.89
APP-211ENST00000462267 WDR61Q9GZS3 305 aaKnown RBP9.51□□□□□ -0.89
APP-211ENST00000462267 IL36BQ9NZH7 164 aa9.51□□□□□ -0.89
APP-211ENST00000462267 A0A087WWL8 130 aa9.5□□□□□ -0.89
APP-211ENST00000462267 SLPIP03973 132 aa9.5□□□□□ -0.89
APP-211ENST00000462267 TCRBP04435 133 aa9.5□□□□□ -0.89
APP-211ENST00000462267 NHLH2Q02577 135 aa9.5□□□□□ -0.89
APP-211ENST00000462267 SRSF9Q13242 221 aaKnown RBP eCLIP9.5□□□□□ -0.89
APP-211ENST00000462267 RAB32Q13637 225 aa9.5□□□□□ -0.89
APP-211ENST00000462267 CNPY1Q3B7I2 92 aa9.5□□□□□ -0.89
APP-211ENST00000462267 LCE2AQ5TA79 106 aaPredicted RBP9.5□□□□□ -0.89
APP-211ENST00000462267 CHCHD5Q9BSY4 110 aa9.5□□□□□ -0.89
APP-211ENST00000462267 VAX2Q9UIW0 290 aa9.5□□□□□ -0.89
APP-211ENST00000462267 IGKV3D-20A0A0C4DH25 116 aa9.49□□□□□ -0.89
APP-211ENST00000462267 IL15RAQ13261 267 aa9.49□□□□□ -0.89
APP-211ENST00000462267 OR10G8Q8NGN5 311 aa9.49□□□□□ -0.89
APP-211ENST00000462267 K7EQM0 130 aa9.48□□□□□ -0.89
APP-211ENST00000462267 PTTG1O95997 202 aa9.48□□□□□ -0.89
APP-211ENST00000462267 MAJINQ3KP22 176 aa9.48□□□□□ -0.89
APP-211ENST00000462267 CLPSL2Q6UWE3 100 aa9.48□□□□□ -0.89
APP-211ENST00000462267 LINC00269Q8N2A0 174 aa9.48□□□□□ -0.89
APP-211ENST00000462267 SFRP2Q96HF1 295 aa9.48□□□□□ -0.89
APP-211ENST00000462267 PSG8Q9UQ74 426 aa9.48□□□□□ -0.89
APP-211ENST00000462267 CENPXA8MT69 81 aa9.47□□□□□ -0.89
APP-211ENST00000462267 TCRAP04437 139 aa9.47□□□□□ -0.89
APP-211ENST00000462267 COX6A2Q02221 97 aa9.47□□□□□ -0.89
APP-211ENST00000462267 PQLC2Q6ZP29 291 aa9.47□□□□□ -0.89
APP-211ENST00000462267 OR11H4Q8NGC9 324 aa9.47□□□□□ -0.89
APP-211ENST00000462267 FAM231BA6NCW3 169 aa9.46□□□□□ -0.9
APP-211ENST00000462267 H3BVH4 76 aa9.46□□□□□ -0.9
APP-211ENST00000462267 BTCP35070 178 aa9.46□□□□□ -0.9
APP-211ENST00000462267 RBX1P62877 108 aa9.46□□□□□ -0.9
APP-211ENST00000462267 TRIQKQ629K1 86 aa9.46□□□□□ -0.9
APP-211ENST00000462267 STPG4Q8N801 248 aa9.46□□□□□ -0.9
APP-211ENST00000462267 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.46□□□□□ -0.9
APP-211ENST00000462267 C5orf17Q8NAS9 161 aa9.46□□□□□ -0.9
APP-211ENST00000462267 LYPD6BQ8NI32 183 aa9.46□□□□□ -0.9
APP-211ENST00000462267 H7C1H1 209 aa9.45□□□□□ -0.9
APP-211ENST00000462267 NDUFS6O75380 124 aaKnown RBP9.45□□□□□ -0.9
APP-211ENST00000462267 EIF3GO75821 320 aaKnown RBP eCLIP9.45□□□□□ -0.9
APP-211ENST00000462267 FLI1Q01543 452 aaPredicted RBP9.45□□□□□ -0.9
APP-211ENST00000462267 SAPCD1Q5SSQ6 148 aa9.45□□□□□ -0.9
APP-211ENST00000462267 PRNTQ86SH4 94 aa9.45□□□□□ -0.9
APP-211ENST00000462267 IGLV10-54A0A075B6I4 117 aa9.44□□□□□ -0.9
APP-211ENST00000462267 TRAV8-4A0A0B4J246 113 aa9.44□□□□□ -0.9
APP-211ENST00000462267 FABP5P3A8MUU1 101 aa9.44□□□□□ -0.9
APP-211ENST00000462267 P01737 135 aa9.44□□□□□ -0.9
APP-211ENST00000462267 ARMS2P0C7Q2 107 aa9.44□□□□□ -0.9
APP-211ENST00000462267 GZMBP10144 247 aa9.44□□□□□ -0.9
APP-211ENST00000462267 DNLZQ5SXM8 178 aa9.44□□□□□ -0.9
APP-211ENST00000462267 Q6ZRP5 223 aa9.44□□□□□ -0.9
APP-211ENST00000462267 LINC00299Q6ZSB3 139 aa9.44□□□□□ -0.9
APP-211ENST00000462267 IGKV2-24A0A0C4DH68 120 aa9.43□□□□□ -0.9
APP-211ENST00000462267 MUC21A0A0G2JKD1 596 aa9.43□□□□□ -0.9
APP-211ENST00000462267 REG3AQ06141 175 aa9.43□□□□□ -0.9
APP-211ENST00000462267 TMEM97Q5BJF2 176 aa9.43□□□□□ -0.9
APP-211ENST00000462267 PHLDA3Q9Y5J5 127 aa9.43□□□□□ -0.9
APP-211ENST00000462267 A0A1W2PPV4 95 aa9.42□□□□□ -0.9
APP-211ENST00000462267 B4DEV8 164 aa9.42□□□□□ -0.9
APP-211ENST00000462267 IFNA7P01567 189 aa9.42□□□□□ -0.9
APP-211ENST00000462267 NEXN-AS1Q8NBZ9 246 aa9.42□□□□□ -0.9
APP-211ENST00000462267 PRSS3P2Q8NHM4 247 aa9.42□□□□□ -0.9
APP-211ENST00000462267 RPS10P46783 165 aaKnown RBP9.41□□□□□ -0.9
APP-211ENST00000462267 GAGE6Q13070 117 aa9.41□□□□□ -0.9
APP-211ENST00000462267 NTM-AS1Q6ZSK4 140 aa9.41□□□□□ -0.9
APP-211ENST00000462267 ZNF664Q8N3J9 261 aa9.41□□□□□ -0.9
APP-211ENST00000462267 S100ZQ8WXG8 99 aa9.41□□□□□ -0.9
APP-211ENST00000462267 SEC22CQ9BRL7 303 aa9.41□□□□□ -0.9
APP-211ENST00000462267 PSORS1C2Q9UIG4 136 aa9.41□□□□□ -0.9
APP-211ENST00000462267 M0R381 172 aa9.4□□□□□ -0.9
APP-211ENST00000462267 RAB4BP61018 213 aa9.4□□□□□ -0.9
APP-211ENST00000462267 ZFP82Q8N141 532 aa9.4□□□□□ -0.9
APP-211ENST00000462267 SDHCQ99643 169 aaPredicted RBP9.4□□□□□ -0.9
APP-211ENST00000462267 EPDR1Q9UM22 224 aa9.4□□□□□ -0.9
APP-211ENST00000462267 KRBOX1C9JBD0 128 aa9.39□□□□□ -0.91
APP-211ENST00000462267 IL7P13232 177 aa9.39□□□□□ -0.91
APP-211ENST00000462267 TPT1P13693 172 aaKnown RBP9.39□□□□□ -0.91
APP-211ENST00000462267 PRR27Q6MZM9 219 aa9.39□□□□□ -0.91
APP-211ENST00000462267 CFAP161Q6P656 301 aa9.39□□□□□ -0.91
APP-211ENST00000462267 CCDC32Q9BV29 185 aa9.39□□□□□ -0.91
APP-211ENST00000462267 LINC00474Q9P2X8 69 aa9.39□□□□□ -0.91
APP-211ENST00000462267 TRBV25-1A0A075B6N4 114 aa9.38□□□□□ -0.91
APP-211ENST00000462267 TRAV26-2A0A0B4J265 109 aa9.38□□□□□ -0.91
APP-211ENST00000462267 SCGB1C1Q8TD33 95 aa9.38□□□□□ -0.91
APP-211ENST00000462267 GRIFINA4D1Z8 144 aa9.37□□□□□ -0.91
APP-211ENST00000462267 ARL14EPLP0DKL9 152 aa9.37□□□□□ -0.91
APP-211ENST00000462267 SUMO1P63165 101 aaKnown RBP9.37□□□□□ -0.91
APP-211ENST00000462267 C15orf56Q8N910 161 aa9.37□□□□□ -0.91
APP-211ENST00000462267 DERL1Q9BUN8 251 aa9.37□□□□□ -0.91
APP-211ENST00000462267 TRAV6A0A075B6T7 132 aa9.36□□□□□ -0.91
APP-211ENST00000462267 A0A096LNI7 61 aa9.36□□□□□ -0.91
APP-211ENST00000462267 TRBV6-1A0A0K0K1D8 114 aa9.36□□□□□ -0.91
APP-211ENST00000462267 M0R036 132 aa9.36□□□□□ -0.91
APP-211ENST00000462267 HMGB3O15347 200 aaKnown RBP9.36□□□□□ -0.91
APP-211ENST00000462267 RAB5CP51148 216 aa9.36□□□□□ -0.91
APP-211ENST00000462267 IQCJQ1A5X6 159 aa9.36□□□□□ -0.91
APP-211ENST00000462267 C20orf203Q8NBC4 194 aa9.36□□□□□ -0.91
APP-211ENST00000462267 SUN5Q8TC36 379 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms