RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 ABCA2Q9BZC7 2435 aa13.82□□□□□ -0.2
HPS3-204ENST00000462030 TMEM170BQ5T4T1 132 aa13.82□□□□□ -0.2
HPS3-204ENST00000462030 ZNRF2Q8NHG8 242 aa13.82□□□□□ -0.2
HPS3-204ENST00000462030 TGFAP01135 160 aa13.81□□□□□ -0.2
HPS3-204ENST00000462030 IGHV3-30P01768 117 aa13.81□□□□□ -0.2
HPS3-204ENST00000462030 IGHV3-30-5P0DP03 117 aa13.81□□□□□ -0.2
HPS3-204ENST00000462030 EDN2P20800 178 aa13.81□□□□□ -0.2
HPS3-204ENST00000462030 CKS1BP61024 79 aa13.81□□□□□ -0.2
HPS3-204ENST00000462030 CFC1BP0CG36 223 aa13.81□□□□□ -0.2
HPS3-204ENST00000462030 CFC1P0CG37 223 aa13.81□□□□□ -0.2
HPS3-204ENST00000462030 PAPPA-AS1Q5QFB9 102 aa13.81□□□□□ -0.2
HPS3-204ENST00000462030 CARD19Q96LW7 228 aa13.81□□□□□ -0.2
HPS3-204ENST00000462030 RHPN1-AS1Q9BWJ2 59 aa13.81□□□□□ -0.2
HPS3-204ENST00000462030 F5H697 171 aa13.8□□□□□ -0.2
HPS3-204ENST00000462030 RPL32P62910 135 aaKnown RBP13.8□□□□□ -0.2
HPS3-204ENST00000462030 TCTEX1D4Q5JR98 221 aa13.8□□□□□ -0.2
HPS3-204ENST00000462030 SDHAF1A6NFY7 115 aa13.79□□□□□ -0.2
HPS3-204ENST00000462030 LY6EQ16553 131 aa13.79□□□□□ -0.2
HPS3-204ENST00000462030 FAM159AQ6UWV7 190 aa13.79□□□□□ -0.2
HPS3-204ENST00000462030 KIR2DL4Q99706 377 aa13.79□□□□□ -0.2
HPS3-204ENST00000462030 KLLNB2CW77 178 aa13.79□□□□□ -0.2
HPS3-204ENST00000462030 TMEM141Q96I45 108 aa13.79□□□□□ -0.2
HPS3-204ENST00000462030 AMELXQ99217 191 aa13.79□□□□□ -0.2
HPS3-204ENST00000462030 VPS13CQ709C8 3753 aa13.78□□□□□ -0.2
HPS3-204ENST00000462030 VCYO14598 125 aa13.78□□□□□ -0.2
HPS3-204ENST00000462030 MT-ATP8P03928 68 aa13.78□□□□□ -0.2
HPS3-204ENST00000462030 SLC25A29Q8N8R3 303 aa13.78□□□□□ -0.2
HPS3-204ENST00000462030 TIMM17AQ99595 171 aa13.78□□□□□ -0.2
HPS3-204ENST00000462030 TRBV7-9A0A0J9YWB2 115 aa13.78□□□□□ -0.2
HPS3-204ENST00000462030 ZNF876PQ49A33 203 aa13.78□□□□□ -0.2
HPS3-204ENST00000462030 SPTAN1Q13813 2472 aaKnown RBP13.77□□□□□ -0.2
HPS3-204ENST00000462030 PF4V1P10720 104 aa13.77□□□□□ -0.21
HPS3-204ENST00000462030 KLRB1Q12918 225 aa13.77□□□□□ -0.21
HPS3-204ENST00000462030 FAM74A4Q5TZK3 123 aa13.77□□□□□ -0.21
HPS3-204ENST00000462030 LYRM7Q5U5X0 104 aa13.77□□□□□ -0.21
HPS3-204ENST00000462030 TEN1Q86WV5 123 aa13.77□□□□□ -0.21
HPS3-204ENST00000462030 C10orf126Q8N4M7 172 aa13.77□□□□□ -0.21
HPS3-204ENST00000462030 TRAV12-3A0A0B4J271 114 aa13.76□□□□□ -0.21
HPS3-204ENST00000462030 OPRPNQ99935 248 aaPredicted RBP13.76□□□□□ -0.21
HPS3-204ENST00000462030 ZNF256Q9Y2P7 627 aaPredicted RBP13.76□□□□□ -0.21
HPS3-204ENST00000462030 J3QQQ9 107 aa13.76□□□□□ -0.21
HPS3-204ENST00000462030 SPINK8P0C7L1 97 aa13.76□□□□□ -0.21
HPS3-204ENST00000462030 XGP55808 180 aa13.76□□□□□ -0.21
HPS3-204ENST00000462030 PPDPFLQ8WWR9 84 aa13.76□□□□□ -0.21
HPS3-204ENST00000462030 HIVEP3Q5T1R4 2406 aa13.76□□□□□ -0.21
HPS3-204ENST00000462030 IGHV1-69P01742 117 aa13.75□□□□□ -0.21
HPS3-204ENST00000462030 CRYBA4P53673 196 aa13.75□□□□□ -0.21
HPS3-204ENST00000462030 Q6ZUT4 128 aa13.75□□□□□ -0.21
HPS3-204ENST00000462030 USMG5Q96IX5 58 aa13.75□□□□□ -0.21
HPS3-204ENST00000462030 TRBV27A0A0K0K1C4 114 aa13.74□□□□□ -0.21
HPS3-204ENST00000462030 PRO1854Q9UHT4 67 aa13.74□□□□□ -0.21
HPS3-204ENST00000462030 TRBV20-1A0A075B6N2 111 aa13.73□□□□□ -0.21
HPS3-204ENST00000462030 LGALS9O00182 355 aa13.73□□□□□ -0.21
HPS3-204ENST00000462030 EIF4EBP3O60516 100 aaPredicted RBP13.73□□□□□ -0.21
HPS3-204ENST00000462030 LGALS3P17931 250 aaKnown RBP13.73□□□□□ -0.21
HPS3-204ENST00000462030 SBSPONQ8IVN8 264 aa13.73□□□□□ -0.21
HPS3-204ENST00000462030 DAZ1Q9NQZ3 744 aaKnown RBP13.73□□□□□ -0.21
HPS3-204ENST00000462030 A8MWV9 139 aa13.73□□□□□ -0.21
HPS3-204ENST00000462030 IGHG2P01859 326 aa13.73□□□□□ -0.21
HPS3-204ENST00000462030 SCGB1C2P0DMR2 95 aa13.73□□□□□ -0.21
HPS3-204ENST00000462030 BLCAPP62952 87 aa13.73□□□□□ -0.21
HPS3-204ENST00000462030 ANKRD29Q8N6D5 301 aa13.73□□□□□ -0.21
HPS3-204ENST00000462030 CLUHP3Q96NS8 147 aa13.73□□□□□ -0.21
HPS3-204ENST00000462030 IGHV3-64A0A075B6Q5 118 aa13.72□□□□□ -0.21
HPS3-204ENST00000462030 RAX2Q96IS3 184 aa13.72□□□□□ -0.21
HPS3-204ENST00000462030 GEMIN7Q9H840 131 aaKnown RBP13.72□□□□□ -0.21
HPS3-204ENST00000462030 TRBV6-5A0A0K0K1A5 114 aa13.71□□□□□ -0.21
HPS3-204ENST00000462030 A4D1N5 150 aa13.71□□□□□ -0.21
HPS3-204ENST00000462030 IGHV4-38-2P0DP08 117 aa13.71□□□□□ -0.21
HPS3-204ENST00000462030 ZNF56Q15929 161 aa13.71□□□□□ -0.21
HPS3-204ENST00000462030 DCANP1Q8TF63 244 aa13.71□□□□□ -0.21
HPS3-204ENST00000462030 MDFICQ9P1T7 246 aa13.71□□□□□ -0.21
HPS3-204ENST00000462030 H3BUX3 64 aa13.71□□□□□ -0.21
HPS3-204ENST00000462030 TRAV12-2A0A075B6T6 113 aa13.7□□□□□ -0.22
HPS3-204ENST00000462030 H3BUA1 57 aa13.7□□□□□ -0.22
HPS3-204ENST00000462030 IGKV3-20P01619 116 aa13.7□□□□□ -0.22
HPS3-204ENST00000462030 TRAV26-1A0A087WT03 109 aa13.7□□□□□ -0.22
HPS3-204ENST00000462030 IGHV3-16A0A0C4DH30 117 aa13.7□□□□□ -0.22
HPS3-204ENST00000462030 C9orf85Q96MD7 179 aa13.7□□□□□ -0.22
HPS3-204ENST00000462030 TMEM223A0PJW6 202 aa13.69□□□□□ -0.22
HPS3-204ENST00000462030 M0QY20 66 aa13.69□□□□□ -0.22
HPS3-204ENST00000462030 P0DMU3 169 aa13.69□□□□□ -0.22
HPS3-204ENST00000462030 FAM231AP0DMU4 169 aa13.69□□□□□ -0.22
HPS3-204ENST00000462030 FAM231CP0DMU5 169 aa13.69□□□□□ -0.22
HPS3-204ENST00000462030 BRI3O95415 125 aa13.69□□□□□ -0.22
HPS3-204ENST00000462030 IGHV4-39P01824 125 aa13.69□□□□□ -0.22
HPS3-204ENST00000462030 TRAV2A0A0B4J234 112 aa13.68□□□□□ -0.22
HPS3-204ENST00000462030 H7C2G1 150 aa13.68□□□□□ -0.22
HPS3-204ENST00000462030 ZNF688P0C7X2 276 aa13.68□□□□□ -0.22
HPS3-204ENST00000462030 ID1P41134 155 aa13.68□□□□□ -0.22
HPS3-204ENST00000462030 Q5PR19 223 aa13.68□□□□□ -0.22
HPS3-204ENST00000462030 TRPT1Q86TN4 253 aaKnown RBP13.68□□□□□ -0.22
HPS3-204ENST00000462030 ZNF580Q9UK33 172 aa13.68□□□□□ -0.22
HPS3-204ENST00000462030 LEPROTO15243 131 aa13.68□□□□□ -0.22
HPS3-204ENST00000462030 IGHV3-33P01772 117 aa13.68□□□□□ -0.22
HPS3-204ENST00000462030 NSUN5P1Q3KNT7 163 aa13.68□□□□□ -0.22
HPS3-204ENST00000462030 COL12A1Q99715 3063 aa13.67□□□□□ -0.22
HPS3-204ENST00000462030 A6NDX4 124 aa13.67□□□□□ -0.22
HPS3-204ENST00000462030 ZNF22P17026 224 aaPredicted RBP13.67□□□□□ -0.22
HPS3-204ENST00000462030 TMEM263Q8WUH6 116 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms