RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 TRAV12-2A0A075B6T6 113 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 TRBV6-7A0A0A0MS04 114 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 TRBV6-8A0A0A6YYG3 113 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 TCRBV4S1A1TA0A5B7 111 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 TMEM218A2RU14 115 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 A6NN06 94 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 EDF1O60869 148 aaKnown RBP0.95□□□□□ -2.26
HDAC6-212ENST00000461608 KLF7O75840 302 aaPredicted RBP0.95□□□□□ -2.26
HDAC6-212ENST00000461608 IFNA17P01571 189 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 RBP4P02753 201 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 APODP05090 189 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 S100A8P05109 93 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 SAA1P0DJI8 122 aaPredicted RBP0.95□□□□□ -2.26
HDAC6-212ENST00000461608 CCL4P13236 92 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 GNG4P50150 75 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 TPPP2P59282 170 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 TEX261Q6UWH6 196 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 Q8TAT8 98 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 ZNF431Q8TF32 576 aaPredicted RBP0.95□□□□□ -2.26
HDAC6-212ENST00000461608 LSM10Q969L4 123 aaKnown RBP0.95□□□□□ -2.26
HDAC6-212ENST00000461608 AGPAT4-IT1Q9H0P7 198 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 CCDC167Q9P0B6 97 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 METTL1Q9UBP6 276 aaKnown RBP0.95□□□□□ -2.26
HDAC6-212ENST00000461608 ARFGEF3Q5TH69 2177 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 SCN8AQ9UQD0 1980 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 HFM1A2PYH4 1435 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 ABCC5O15440 1437 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 RRBP1Q9P2E9 1410 aaKnown RBP0.95□□□□□ -2.26
HDAC6-212ENST00000461608 PPLO60437 1756 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 AKAP12Q02952 1782 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 EP400Q96L91 3159 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 IFT172Q9UG01 1749 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 CRYBG1Q9Y4K1 1723 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 PRRC2BQ5JSZ5 2229 aaKnown RBP0.95□□□□□ -2.26
HDAC6-212ENST00000461608 OBSL1O75147 1896 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 ALS2Q96Q42 1657 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 WNK3Q9BYP7 1800 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 MYH10P35580 1976 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 COL1A1P02452 1464 aaPredicted RBP0.94□□□□□ -2.26
HDAC6-212ENST00000461608 TRAV10A0A0B4J240 114 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 E7EUB6 86 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 M0R143 59 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 ETV6P41212 452 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 DSCR4P56555 118 aaPredicted RBP0.94□□□□□ -2.26
HDAC6-212ENST00000461608 S100A10P60903 97 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 MIR22HGQ0VDD5 57 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 FAM74A1Q5RGS3 127 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 S100A7L2Q5SY68 101 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 GDF5OSQ5U4N7 250 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 MRPL54Q6P161 138 aaKnown RBP0.94□□□□□ -2.26
HDAC6-212ENST00000461608 ZCCHC23Q6ZST2 131 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 C3orf62Q6ZUJ4 267 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 GTF2H5Q6ZYL4 71 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 ARPINQ7Z6K5 226 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 GKN2Q86XP6 184 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 LINC00269Q8N2A0 174 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 C5orf17Q8NAS9 161 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 PSMF1Q92530 271 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 MUCL1Q96DR8 90 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 ODF3Q96PU9 254 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 SMIM7Q9BQ49 75 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 ZFP30Q9Y2G7 519 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 NOP16Q9Y3C1 178 aaKnown RBP0.94□□□□□ -2.26
HDAC6-212ENST00000461608 DAPK1P53355 1430 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 ANKRD50Q9ULJ7 1429 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 ITSN1Q15811 1721 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 PEAK1Q9H792 1746 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 FER1L6Q2WGJ9 1857 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 MED13Q9UHV7 2174 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 COL4A5P29400 1685 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 TOPAZ1Q8N9V7 1692 aa0.94□□□□□ -2.26
HDAC6-212ENST00000461608 CLTCL1P53675 1640 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 PHRF1Q9P1Y6 1649 aaKnown RBP0.93□□□□□ -2.26
HDAC6-212ENST00000461608 NRXN1Q9ULB1 1477 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 SRCAPQ6ZRS2 3230 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 NUP210LQ5VU65 1888 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 NAIPQ13075 1403 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 ANKARQ7Z5J8 1434 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 A0A087WSZ3 146 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 TRAV30A0A087WSZ9 112 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 TRAV17A0A0B4J275 112 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 OOSP1A8MZH6 123 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 M0R2P5 195 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 ERC2-IT1O76042 136 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 SNCGO76070 127 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 MPC2O95563 127 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 IL5P05113 134 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 SPINK8P0C7L1 97 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 IL7P13232 177 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 GNG2P59768 71 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 HSD52Q0P140 79 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 IQCJQ1A5X6 159 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 MPV17LQ2QL34 196 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 C9orf153Q5TBE3 101 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 ATP11AUNQ6ZP68 121 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 FOXI2Q6ZQN5 318 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 C8orf59Q8N0T1 100 aaPredicted RBP0.93□□□□□ -2.26
HDAC6-212ENST00000461608 ATOH7Q8N100 152 aa0.93□□□□□ -2.26
HDAC6-212ENST00000461608 SNRNP25Q9BV90 132 aaKnown RBP0.93□□□□□ -2.26
HDAC6-212ENST00000461608 RERGLQ9H628 205 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms