RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 DNLZQ5SXM8 178 aa10.37□□□□□ -0.75
NUP50-213ENST00000461437 ZFP2Q6ZN57 461 aa10.37□□□□□ -0.75
NUP50-213ENST00000461437 PHLDA3Q9Y5J5 127 aa10.37□□□□□ -0.75
NUP50-213ENST00000461437 MUC21A0A0G2JKD1 596 aa10.36□□□□□ -0.75
NUP50-213ENST00000461437 TRBV6-1A0A0K0K1D8 114 aa10.36□□□□□ -0.75
NUP50-213ENST00000461437 MUC21A0A140T8X8 626 aa10.36□□□□□ -0.75
NUP50-213ENST00000461437 HMSDA8MTL9 139 aa10.36□□□□□ -0.75
NUP50-213ENST00000461437 K7EP13 123 aa10.36□□□□□ -0.75
NUP50-213ENST00000461437 TPT1P13693 172 aaKnown RBP10.36□□□□□ -0.75
NUP50-213ENST00000461437 WFDC2Q14508 124 aa10.36□□□□□ -0.75
NUP50-213ENST00000461437 SYT8Q8NBV8 401 aa10.36□□□□□ -0.75
NUP50-213ENST00000461437 A0A0D9SG52 128 aa10.35□□□□□ -0.75
NUP50-213ENST00000461437 CCL20P78556 96 aa10.35□□□□□ -0.75
NUP50-213ENST00000461437 CDPF1Q6NVV7 123 aa10.35□□□□□ -0.75
NUP50-213ENST00000461437 TMUB2Q71RG4 321 aa10.35□□□□□ -0.75
NUP50-213ENST00000461437 DAZ4Q86SG3 579 aaKnown RBP10.35□□□□□ -0.75
NUP50-213ENST00000461437 SFRP2Q96HF1 295 aa10.35□□□□□ -0.75
NUP50-213ENST00000461437 DNAJC30Q96LL9 226 aa10.35□□□□□ -0.75
NUP50-213ENST00000461437 DAZ3Q9NR90 486 aaKnown RBP10.35□□□□□ -0.75
NUP50-213ENST00000461437 H2AFB1P0C5Y9 115 aa10.34□□□□□ -0.75
NUP50-213ENST00000461437 SSTP61278 116 aa10.34□□□□□ -0.75
NUP50-213ENST00000461437 PIK3CD-AS1Q5SR53 167 aa10.34□□□□□ -0.75
NUP50-213ENST00000461437 PRR27Q6MZM9 219 aa10.34□□□□□ -0.75
NUP50-213ENST00000461437 OR10AG1Q8NH19 301 aa10.34□□□□□ -0.75
NUP50-213ENST00000461437 HERC1Q15751 4861 aa10.34□□□□□ -0.75
NUP50-213ENST00000461437 UMAD1C9J7I0 102 aa10.33□□□□□ -0.76
NUP50-213ENST00000461437 LECT2O14960 151 aa10.33□□□□□ -0.76
NUP50-213ENST00000461437 PFDN1O60925 122 aa10.33□□□□□ -0.76
NUP50-213ENST00000461437 GCSHP23434 173 aa10.33□□□□□ -0.76
NUP50-213ENST00000461437 BAGE2Q86Y30 109 aa10.33□□□□□ -0.76
NUP50-213ENST00000461437 TCEAL7Q9BRU2 100 aa10.33□□□□□ -0.76
NUP50-213ENST00000461437 DERL1Q9BUN8 251 aa10.33□□□□□ -0.76
NUP50-213ENST00000461437 VPS13BQ7Z7G8 4022 aa10.32□□□□□ -0.76
NUP50-213ENST00000461437 IGLV5-52A0A0A0MRZ9 124 aa10.32□□□□□ -0.76
NUP50-213ENST00000461437 RHODO00212 210 aa10.32□□□□□ -0.76
NUP50-213ENST00000461437 ZFP82Q8N141 532 aa10.32□□□□□ -0.76
NUP50-213ENST00000461437 GNG13Q9P2W3 67 aa10.32□□□□□ -0.76
NUP50-213ENST00000461437 SMR3BP02814 79 aaPredicted RBP10.31□□□□□ -0.76
NUP50-213ENST00000461437 Q8N814 137 aa10.31□□□□□ -0.76
NUP50-213ENST00000461437 MLST8Q9BVC4 326 aa10.31□□□□□ -0.76
NUP50-213ENST00000461437 EPM2AB3EWF7 344 aa10.3□□□□□ -0.76
NUP50-213ENST00000461437 GZMBP10144 247 aa10.29□□□□□ -0.76
NUP50-213ENST00000461437 RPL35P42766 123 aaKnown RBP10.29□□□□□ -0.76
NUP50-213ENST00000461437 ZNF56Q15929 161 aa10.29□□□□□ -0.76
NUP50-213ENST00000461437 S100A9P06702 114 aaKnown RBP10.28□□□□□ -0.76
NUP50-213ENST00000461437 LAGE3Q14657 143 aa10.28□□□□□ -0.76
NUP50-213ENST00000461437 NIT1Q86X76 327 aa10.28□□□□□ -0.76
NUP50-213ENST00000461437 FAM30AQ9NZY2 134 aa10.28□□□□□ -0.76
NUP50-213ENST00000461437 KLK12Q9UKR0 248 aa10.28□□□□□ -0.76
NUP50-213ENST00000461437 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.27□□□□□ -0.77
NUP50-213ENST00000461437 RAB19A4D1S5 217 aa10.27□□□□□ -0.77
NUP50-213ENST00000461437 RBFOX3A6NFN3 312 aa10.27□□□□□ -0.77
NUP50-213ENST00000461437 UBE2D3P61077 147 aa10.27□□□□□ -0.77
NUP50-213ENST00000461437 UBE2D2P62837 147 aa10.27□□□□□ -0.77
NUP50-213ENST00000461437 EIF5AP63241 154 aaKnown RBP10.27□□□□□ -0.77
NUP50-213ENST00000461437 CENPWQ5EE01 88 aa10.27□□□□□ -0.77
NUP50-213ENST00000461437 Q5VSD8 79 aa10.27□□□□□ -0.77
NUP50-213ENST00000461437 NEXN-AS1Q8NBZ9 246 aa10.27□□□□□ -0.77
NUP50-213ENST00000461437 BAALCQ8WXS3 180 aa10.27□□□□□ -0.77
NUP50-213ENST00000461437 A0A087WWC5 75 aa10.26□□□□□ -0.77
NUP50-213ENST00000461437 SNAI2O43623 268 aa10.26□□□□□ -0.77
NUP50-213ENST00000461437 RPL36AP83881 106 aaKnown RBP10.26□□□□□ -0.77
NUP50-213ENST00000461437 LINC01620Q4KN68 170 aa10.26□□□□□ -0.77
NUP50-213ENST00000461437 SPANXN1Q5VSR9 72 aa10.26□□□□□ -0.77
NUP50-213ENST00000461437 RPL36ALQ969Q0 106 aaKnown RBP10.26□□□□□ -0.77
NUP50-213ENST00000461437 MANBALQ9NQG1 85 aa10.26□□□□□ -0.77
NUP50-213ENST00000461437 TRBV7-3A0A075B6L6 115 aa10.25□□□□□ -0.77
NUP50-213ENST00000461437 IGLV2-8P01709 118 aa10.25□□□□□ -0.77
NUP50-213ENST00000461437 C11orf52Q96A22 123 aa10.25□□□□□ -0.77
NUP50-213ENST00000461437 UBE2WQ96B02 151 aa10.25□□□□□ -0.77
NUP50-213ENST00000461437 TPPP3Q9BW30 176 aa10.25□□□□□ -0.77
NUP50-213ENST00000461437 TM2D2Q9BX73 214 aa10.25□□□□□ -0.77
NUP50-213ENST00000461437 URGCP-MRPS24S4R325 110 aa10.25□□□□□ -0.77
NUP50-213ENST00000461437 IGKV2D-24A0A075B6R9 120 aa10.24□□□□□ -0.77
NUP50-213ENST00000461437 TRAV8-3A0A0A6YYJ7 113 aa10.24□□□□□ -0.77
NUP50-213ENST00000461437 TRBV10-1A0A0K0K1A3 114 aa10.24□□□□□ -0.77
NUP50-213ENST00000461437 F5H697 171 aa10.24□□□□□ -0.77
NUP50-213ENST00000461437 CXCL1P09341 107 aa10.24□□□□□ -0.77
NUP50-213ENST00000461437 SULT1A2P50226 295 aa10.24□□□□□ -0.77
NUP50-213ENST00000461437 RAB4BP61018 213 aa10.24□□□□□ -0.77
NUP50-213ENST00000461437 NTN5Q8WTR8 489 aaPredicted RBP10.24□□□□□ -0.77
NUP50-213ENST00000461437 SSBP4Q9BWG4 385 aaPredicted RBP10.24□□□□□ -0.77
NUP50-213ENST00000461437 BOLA1Q9Y3E2 137 aa10.24□□□□□ -0.77
NUP50-213ENST00000461437 OR5AL1P0C617 328 aa10.23□□□□□ -0.77
NUP50-213ENST00000461437 FLG2Q5D862 2391 aaPredicted RBP10.22□□□□□ -0.77
NUP50-213ENST00000461437 A0A087WX48 190 aa10.22□□□□□ -0.77
NUP50-213ENST00000461437 TRAV1-1A0A0B4J248 108 aa10.22□□□□□ -0.77
NUP50-213ENST00000461437 TMEM262E9PQX1 116 aa10.22□□□□□ -0.77
NUP50-213ENST00000461437 C1QBP02746 253 aa10.22□□□□□ -0.77
NUP50-213ENST00000461437 INAFM2P0DMQ5 153 aa10.22□□□□□ -0.77
NUP50-213ENST00000461437 TOR2AQ5JU69 321 aa10.22□□□□□ -0.77
NUP50-213ENST00000461437 TCTE3Q8IZS6 198 aa10.22□□□□□ -0.77
NUP50-213ENST00000461437 OR2D3Q8NGH3 330 aa10.22□□□□□ -0.77
NUP50-213ENST00000461437 OR10G8Q8NGN5 311 aa10.22□□□□□ -0.77
NUP50-213ENST00000461437 FRZBQ92765 325 aa10.22□□□□□ -0.77
NUP50-213ENST00000461437 KIF25-AS1Q9Y6Z4 181 aa10.22□□□□□ -0.77
NUP50-213ENST00000461437 hCG_2014768A0A024R1R8 64 aa10.21□□□□□ -0.77
NUP50-213ENST00000461437 TRBV20OR9-2A0A075B6H5 130 aa10.21□□□□□ -0.77
NUP50-213ENST00000461437 TRBV6-8A0A0A6YYG3 113 aa10.21□□□□□ -0.77
NUP50-213ENST00000461437 MGPP08493 103 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms