RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 HMSDA8MTL9 139 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 FABP5P3A8MUU1 101 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 MCRIP1C9JLW8 97 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 H3BUX3 64 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 M0R1W7 72 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 AIPO00170 330 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 GEMIN2O14893 280 aaKnown RBP1.48□□□□□ -2.17
CLK1-206ENST00000461326 NPFFO15130 113 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 PIN1P1O15428 100 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 ZNF737O75373 536 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 OR7C1O76099 320 aaPredicted RBP1.48□□□□□ -2.17
CLK1-206ENST00000461326 NAPSAO96009 420 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 IGHV3-7P01780 117 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 HLA-DRB1P01911 266 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 NFYBP25208 207 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 UBA52P62987 128 aaKnown RBP1.48□□□□□ -2.17
CLK1-206ENST00000461326 AESQ08117 197 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 NDUFA5Q16718 116 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 AKIRIN2Q53H80 203 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 TMEM91Q6ZNR0 172 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 Q6ZS49 121 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 KTN1-AS1Q86SY8 53 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 ZNF565Q8N9K5 539 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 PXT1Q8NFP0 134 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 OR13D1Q8NGV5 346 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 OR4K15Q8NH41 348 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 MRPL30Q8TCC3 161 aaKnown RBP1.48□□□□□ -2.17
CLK1-206ENST00000461326 LEAP2Q969E1 77 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 PPP1R14BQ96C90 147 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 ZNF714Q96N38 554 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 IDI2-AS1Q9NZ38 188 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 TRAPPC2LQ9UL33 140 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 LSM2Q9Y333 95 aaKnown RBP1.48□□□□□ -2.17
CLK1-206ENST00000461326 HILPDAQ9Y5L2 63 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 LINC00312Q9Y6C7 94 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 TLN2Q9Y4G6 2542 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 PKD1L1Q8TDX9 2849 aa1.48□□□□□ -2.17
CLK1-206ENST00000461326 MTORP42345 2549 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 SONP18583 2426 aaKnown RBP1.47□□□□□ -2.17
CLK1-206ENST00000461326 A0A087WXM4 84 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 TRBV10-2A0A0K0K1G8 114 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 A0A1B0GVG6 124 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 TRDV1A0A1B0GX56 115 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 TMEM30CPA0ZSE6 113 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 ODAMA1E959 279 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 SDCBPO00560 298 aaPredicted RBP1.47□□□□□ -2.17
CLK1-206ENST00000461326 PDCD5O14737 125 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 MRPS14O60783 128 aaKnown RBP1.47□□□□□ -2.17
CLK1-206ENST00000461326 CSN2P05814 226 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 UBBP0CG47 229 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 ERP29P30040 261 aaKnown RBP1.47□□□□□ -2.17
CLK1-206ENST00000461326 SDC2P34741 201 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 LSM3P62310 102 aaKnown RBP1.47□□□□□ -2.17
CLK1-206ENST00000461326 MRPS15P82914 257 aaKnown RBP1.47□□□□□ -2.17
CLK1-206ENST00000461326 SLC38A11Q08AI6 406 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 MPV17LQ2QL34 196 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 HEPN1Q6WQI6 88 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 C6orf201Q7Z4U5 140 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 C3orf56Q8N813 242 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 OR10X1Q8NGY0 326 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 MCFD2Q8NI22 146 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 ARL11Q969Q4 196 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 BORCS7Q96B45 105 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 WDR61Q9GZS3 305 aaKnown RBP1.47□□□□□ -2.17
CLK1-206ENST00000461326 CST11Q9H112 138 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 TMEM133Q9H2Q1 129 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.47□□□□□ -2.17
CLK1-206ENST00000461326 MRPL27Q9P0M9 148 aaKnown RBP1.47□□□□□ -2.17
CLK1-206ENST00000461326 SSR3Q9UNL2 185 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 AMMECR1Q9Y4X0 333 aaPredicted RBP1.47□□□□□ -2.17
CLK1-206ENST00000461326 CSPG4Q6UVK1 2322 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 WNK2Q9Y3S1 2297 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 VWFP04275 2813 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 C2CD3Q4AC94 2353 aa1.47□□□□□ -2.17
CLK1-206ENST00000461326 TRRAPQ9Y4A5 3859 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 NAV3Q8IVL0 2385 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 TRAV1-2A0A0B4J238 106 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 MEIS3P1A6NDR6 274 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 IFITM5A6NNB3 132 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 TMEM14DPA8MWL7 114 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 BUB1B-PAK6H3BSN5 160 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 J3QRK9 145 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 ORC5O43913 435 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 RBP4P02753 201 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 METTL15P1P0C7V9 234 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 HLA-DMBP28068 263 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 BRS3P32247 399 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 VBP1P61758 197 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 QRFPP83859 136 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 DIAPH2-AS1Q14236 149 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 HMGN3Q15651 99 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 MINOS1Q5TGZ0 78 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 LPCAT3Q6P1A2 487 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 OR11H6Q8NGC7 330 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 OR5H6Q8NGV6 325 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 MAFIPQ8WZ33 124 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 MALSU1Q96EH3 234 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 ARHGAP5-AS1Q96IT6 56 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 CMSS1Q9BQ75 279 aaKnown RBP1.46□□□□□ -2.18
CLK1-206ENST00000461326 LPAR5Q9H1C0 372 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms