RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 CRIP1P50238 77 aa5.61□□□□□ -1.51
ECHDC1-212ENST00000461239 FLI1Q01543 452 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-212ENST00000461239 CEMP1Q6PRD7 247 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-212ENST00000461239 PRNTQ86SH4 94 aa5.61□□□□□ -1.51
ECHDC1-212ENST00000461239 LYPD6BQ8NI32 183 aa5.61□□□□□ -1.51
ECHDC1-212ENST00000461239 TMEM263Q8WUH6 116 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-212ENST00000461239 HIST1H2BAQ96A08 127 aa5.61□□□□□ -1.51
ECHDC1-212ENST00000461239 PYGO2Q9BRQ0 406 aa5.61□□□□□ -1.51
ECHDC1-212ENST00000461239 NIPSNAP3BQ9BS92 247 aa5.61□□□□□ -1.51
ECHDC1-212ENST00000461239 NKX6-2Q9C056 277 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-212ENST00000461239 TREM1Q9NP99 234 aa5.61□□□□□ -1.51
ECHDC1-212ENST00000461239 IGHV1OR15-1A0A075B7D0 117 aa5.6□□□□□ -1.51
ECHDC1-212ENST00000461239 SPART-AS1P0CW21 52 aa5.6□□□□□ -1.51
ECHDC1-212ENST00000461239 MUC21Q5SSG8 566 aa5.6□□□□□ -1.51
ECHDC1-212ENST00000461239 ZNF493Q6ZR52 646 aa5.6□□□□□ -1.51
ECHDC1-212ENST00000461239 Q86TA4 180 aa5.6□□□□□ -1.51
ECHDC1-212ENST00000461239 LINC00612Q8N6U2 182 aa5.6□□□□□ -1.51
ECHDC1-212ENST00000461239 C11orf52Q96A22 123 aa5.6□□□□□ -1.51
ECHDC1-212ENST00000461239 C16orf74Q96GX8 76 aa5.6□□□□□ -1.51
ECHDC1-212ENST00000461239 NOP10Q9NPE3 64 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-212ENST00000461239 MDFICQ9P1T7 246 aa5.6□□□□□ -1.51
ECHDC1-212ENST00000461239 GNG13Q9P2W3 67 aa5.6□□□□□ -1.51
ECHDC1-212ENST00000461239 TRBV6-1A0A0K0K1D8 114 aa5.59□□□□□ -1.51
ECHDC1-212ENST00000461239 LOC105371267A0A1B0GV96 52 aa5.59□□□□□ -1.51
ECHDC1-212ENST00000461239 LYRM9A8MSI8 78 aa5.59□□□□□ -1.51
ECHDC1-212ENST00000461239 C11orf94C9JXX5 98 aa5.59□□□□□ -1.51
ECHDC1-212ENST00000461239 GNRH2O43555 120 aa5.59□□□□□ -1.51
ECHDC1-212ENST00000461239 LTAP01374 205 aa5.59□□□□□ -1.51
ECHDC1-212ENST00000461239 DAZ2Q13117 558 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-212ENST00000461239 TMEM183BQ1AE95 376 aa5.59□□□□□ -1.51
ECHDC1-212ENST00000461239 TDRG1Q3Y452 100 aa5.59□□□□□ -1.51
ECHDC1-212ENST00000461239 ZC2HC1AQ96GY0 325 aa5.59□□□□□ -1.51
ECHDC1-212ENST00000461239 TCEAL7Q9BRU2 100 aa5.59□□□□□ -1.51
ECHDC1-212ENST00000461239 DERL1Q9BUN8 251 aa5.59□□□□□ -1.51
ECHDC1-212ENST00000461239 TIMM8BQ9Y5J9 83 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-212ENST00000461239 TRAV21A0A0B4J279 112 aa5.58□□□□□ -1.52
ECHDC1-212ENST00000461239 IGKV3D-20A0A0C4DH25 116 aa5.58□□□□□ -1.52
ECHDC1-212ENST00000461239 IGHV3-38A0A0C4DH36 116 aa5.58□□□□□ -1.52
ECHDC1-212ENST00000461239 K7EQM0 130 aa5.58□□□□□ -1.52
ECHDC1-212ENST00000461239 GCGP01275 180 aa5.58□□□□□ -1.52
ECHDC1-212ENST00000461239 TYMSP04818 313 aa5.58□□□□□ -1.52
ECHDC1-212ENST00000461239 PFN1P07737 140 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-212ENST00000461239 DEFB130BP0DP73 79 aa5.58□□□□□ -1.52
ECHDC1-212ENST00000461239 DEFB130AP0DP74 79 aa5.58□□□□□ -1.52
ECHDC1-212ENST00000461239 PPT1P50897 306 aa5.58□□□□□ -1.52
ECHDC1-212ENST00000461239 TCL1AP56279 114 aa5.58□□□□□ -1.52
ECHDC1-212ENST00000461239 SMUG1Q53HV7 270 aa5.58□□□□□ -1.52
ECHDC1-212ENST00000461239 SAPCD1Q5SSQ6 148 aa5.58□□□□□ -1.52
ECHDC1-212ENST00000461239 IBA57Q5T440 356 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-212ENST00000461239 Q6ZTI0 123 aa5.58□□□□□ -1.52
ECHDC1-212ENST00000461239 PCNPQ8WW12 178 aaKnown RBP5.58□□□□□ -1.52
ECHDC1-212ENST00000461239 FMC1Q96HJ9 113 aa5.58□□□□□ -1.52
ECHDC1-212ENST00000461239 MANBALQ9NQG1 85 aa5.58□□□□□ -1.52
ECHDC1-212ENST00000461239 TRBV20OR9-2A0A075B6H5 130 aa5.57□□□□□ -1.52
ECHDC1-212ENST00000461239 DEFB131BA0A096LNP1 70 aa5.57□□□□□ -1.52
ECHDC1-212ENST00000461239 TRAV10A0A0B4J240 114 aa5.57□□□□□ -1.52
ECHDC1-212ENST00000461239 IGHV3-16A0A0C4DH30 117 aa5.57□□□□□ -1.52
ECHDC1-212ENST00000461239 NUPR2A6NF83 97 aa5.57□□□□□ -1.52
ECHDC1-212ENST00000461239 FBLL1A6NHQ2 334 aaKnown RBP5.57□□□□□ -1.52
ECHDC1-212ENST00000461239 SPINK4O60575 86 aa5.57□□□□□ -1.52
ECHDC1-212ENST00000461239 IGLV2-8P01709 118 aa5.57□□□□□ -1.52
ECHDC1-212ENST00000461239 BCL2P10415 239 aa5.57□□□□□ -1.52
ECHDC1-212ENST00000461239 AKR1C3P42330 323 aa5.57□□□□□ -1.52
ECHDC1-212ENST00000461239 DAD1P61803 113 aa5.57□□□□□ -1.52
ECHDC1-212ENST00000461239 TMEM183AQ8IXX5 376 aa5.57□□□□□ -1.52
ECHDC1-212ENST00000461239 APLNQ9ULZ1 77 aa5.57□□□□□ -1.52
ECHDC1-212ENST00000461239 ZFP30Q9Y2G7 519 aa5.57□□□□□ -1.52
ECHDC1-212ENST00000461239 TEX48A0A1B0GUV7 120 aa5.56□□□□□ -1.52
ECHDC1-212ENST00000461239 IGLL5B9A064 214 aa5.56□□□□□ -1.52
ECHDC1-212ENST00000461239 RNASE3P12724 160 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-212ENST00000461239 RPL35P42766 123 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-212ENST00000461239 MEF2BQ02080 365 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-212ENST00000461239 SVBPQ8N300 66 aa5.56□□□□□ -1.52
ECHDC1-212ENST00000461239 POM121L12Q8N7R1 296 aa5.56□□□□□ -1.52
ECHDC1-212ENST00000461239 TXNDC17Q9BRA2 123 aa5.56□□□□□ -1.52
ECHDC1-212ENST00000461239 NDFIP1Q9BT67 221 aa5.56□□□□□ -1.52
ECHDC1-212ENST00000461239 VAX2Q9UIW0 290 aa5.56□□□□□ -1.52
ECHDC1-212ENST00000461239 NAGKQ9UJ70 344 aa5.56□□□□□ -1.52
ECHDC1-212ENST00000461239 DNAH6Q9C0G6 4158 aa5.56□□□□□ -1.52
ECHDC1-212ENST00000461239 LCE6AA0A183 80 aa5.55□□□□□ -1.52
ECHDC1-212ENST00000461239 RBFOX3A6NFN3 312 aa5.55□□□□□ -1.52
ECHDC1-212ENST00000461239 FABP5P3A8MUU1 101 aa5.55□□□□□ -1.52
ECHDC1-212ENST00000461239 SH2D1AO60880 128 aa5.55□□□□□ -1.52
ECHDC1-212ENST00000461239 HTN3P15516 51 aa5.55□□□□□ -1.52
ECHDC1-212ENST00000461239 UBE2G1P62253 170 aa5.55□□□□□ -1.52
ECHDC1-212ENST00000461239 ZNF506Q5JVG8 444 aa5.55□□□□□ -1.52
ECHDC1-212ENST00000461239 C10orf91Q5T1B1 145 aa5.55□□□□□ -1.52
ECHDC1-212ENST00000461239 BAGE2Q86Y30 109 aa5.55□□□□□ -1.52
ECHDC1-212ENST00000461239 LINC00518Q8N0U6 118 aa5.55□□□□□ -1.52
ECHDC1-212ENST00000461239 C9orf85Q96MD7 179 aa5.55□□□□□ -1.52
ECHDC1-212ENST00000461239 C18orf15Q96N68 181 aa5.55□□□□□ -1.52
ECHDC1-212ENST00000461239 NDUFAF3Q9BU61 184 aa5.55□□□□□ -1.52
ECHDC1-212ENST00000461239 PARLQ9H300 379 aa5.55□□□□□ -1.52
ECHDC1-212ENST00000461239 SMDT1Q9H4I9 107 aa5.55□□□□□ -1.52
ECHDC1-212ENST00000461239 MRPL16Q9NX20 251 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-212ENST00000461239 KLK5Q9Y337 293 aaPredicted RBP5.55□□□□□ -1.52
ECHDC1-212ENST00000461239 MUC4Q99102 2169 aa5.55□□□□□ -1.52
ECHDC1-212ENST00000461239 TRGV1A0A0A0MS02 117 aa5.54□□□□□ -1.52
ECHDC1-212ENST00000461239 C9JQL5 133 aa5.54□□□□□ -1.52
ECHDC1-212ENST00000461239 PDE6DO43924 150 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms