RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 TMEM191AQ9H0A3 160 aa12.18□□□□□ -0.46
NELFCD-201ENST00000460601 DNAH3Q8TD57 4116 aa12.18□□□□□ -0.46
NELFCD-201ENST00000460601 SMKR1H3BMG3 65 aa12.17□□□□□ -0.46
NELFCD-201ENST00000460601 CACNG7P62955 275 aa12.17□□□□□ -0.46
NELFCD-201ENST00000460601 TMEM256Q8N2U0 113 aa12.17□□□□□ -0.46
NELFCD-201ENST00000460601 TRAV26-2A0A0B4J265 109 aa12.17□□□□□ -0.46
NELFCD-201ENST00000460601 NCR2O95944 276 aa12.17□□□□□ -0.46
NELFCD-201ENST00000460601 ZNF705AQ6ZN79 300 aaPredicted RBP12.17□□□□□ -0.46
NELFCD-201ENST00000460601 RNASE8Q8TDE3 154 aaKnown RBP12.17□□□□□ -0.46
NELFCD-201ENST00000460601 NXPH4O95158 308 aa12.16□□□□□ -0.46
NELFCD-201ENST00000460601 DEFB135Q30KP9 77 aa12.16□□□□□ -0.46
NELFCD-201ENST00000460601 ZNF876PQ49A33 203 aa12.16□□□□□ -0.46
NELFCD-201ENST00000460601 MRPL51Q4U2R6 128 aaKnown RBP12.16□□□□□ -0.46
NELFCD-201ENST00000460601 GOLT1BQ9Y3E0 138 aa12.16□□□□□ -0.46
NELFCD-201ENST00000460601 DNHD1Q96M86 4753 aa12.16□□□□□ -0.46
NELFCD-201ENST00000460601 A0A087WWL8 130 aa12.16□□□□□ -0.46
NELFCD-201ENST00000460601 D6R8Y8 96 aa12.16□□□□□ -0.46
NELFCD-201ENST00000460601 RCHY1Q96PM5 261 aa12.16□□□□□ -0.46
NELFCD-201ENST00000460601 LINC00467Q9BRT7 94 aa12.16□□□□□ -0.46
NELFCD-201ENST00000460601 ALKBH7Q9BT30 221 aaPredicted RBP12.16□□□□□ -0.46
NELFCD-201ENST00000460601 SAMD10Q9BYL1 202 aa12.16□□□□□ -0.46
NELFCD-201ENST00000460601 ZNF415Q09FC8 603 aa12.14□□□□□ -0.47
NELFCD-201ENST00000460601 GAGE1Q13065 139 aa12.14□□□□□ -0.47
NELFCD-201ENST00000460601 MRPL16Q9NX20 251 aaKnown RBP12.14□□□□□ -0.47
NELFCD-201ENST00000460601 GATA1P15976 413 aaPredicted RBP12.14□□□□□ -0.47
NELFCD-201ENST00000460601 FAM74A4Q5TZK3 123 aa12.14□□□□□ -0.47
NELFCD-201ENST00000460601 PLAC8L1A1L4L8 177 aa12.13□□□□□ -0.47
NELFCD-201ENST00000460601 NUPR1O60356 82 aa12.13□□□□□ -0.47
NELFCD-201ENST00000460601 C18orf32Q8TCD1 76 aa12.13□□□□□ -0.47
NELFCD-201ENST00000460601 TMEM263Q8WUH6 116 aaKnown RBP12.13□□□□□ -0.47
NELFCD-201ENST00000460601 AP1S3Q96PC3 154 aa12.13□□□□□ -0.47
NELFCD-201ENST00000460601 LINC00310P59036 64 aa12.13□□□□□ -0.47
NELFCD-201ENST00000460601 MGPP08493 103 aa12.12□□□□□ -0.47
NELFCD-201ENST00000460601 SMIM15Q7Z3B0 74 aa12.12□□□□□ -0.47
NELFCD-201ENST00000460601 KIF25-AS1Q9Y6Z4 181 aa12.12□□□□□ -0.47
NELFCD-201ENST00000460601 M0R2P5 195 aa12.11□□□□□ -0.47
NELFCD-201ENST00000460601 SCGB1D1O95968 90 aa12.11□□□□□ -0.47
NELFCD-201ENST00000460601 EMP1P54849 157 aa12.11□□□□□ -0.47
NELFCD-201ENST00000460601 APOC4P55056 127 aa12.11□□□□□ -0.47
NELFCD-201ENST00000460601 RRN3P1Q2M238 152 aa12.11□□□□□ -0.47
NELFCD-201ENST00000460601 KIR2DL5BQ8NHK3 375 aa12.11□□□□□ -0.47
NELFCD-201ENST00000460601 IL17DQ8TAD2 202 aa12.11□□□□□ -0.47
NELFCD-201ENST00000460601 X6R8D5 127 aa12.11□□□□□ -0.47
NELFCD-201ENST00000460601 IGHV3-73A0A0B4J1V6 119 aa12.11□□□□□ -0.47
NELFCD-201ENST00000460601 DLEU1O43261 78 aa12.11□□□□□ -0.47
NELFCD-201ENST00000460601 G0S2P27469 103 aa12.11□□□□□ -0.47
NELFCD-201ENST00000460601 CKS2P33552 79 aa12.11□□□□□ -0.47
NELFCD-201ENST00000460601 LINC00315P59091 139 aa12.11□□□□□ -0.47
NELFCD-201ENST00000460601 SYT8Q8NBV8 401 aa12.11□□□□□ -0.47
NELFCD-201ENST00000460601 DPH3P1Q9H4G8 78 aa12.11□□□□□ -0.47
NELFCD-201ENST00000460601 NOP10Q9NPE3 64 aaKnown RBP12.11□□□□□ -0.47
NELFCD-201ENST00000460601 ZNF25P17030 456 aaPredicted RBP12.1□□□□□ -0.47
NELFCD-201ENST00000460601 SERF1AO75920 110 aa12.1□□□□□ -0.47
NELFCD-201ENST00000460601 NPYP01303 97 aa12.1□□□□□ -0.47
NELFCD-201ENST00000460601 CRYGDP07320 174 aa12.1□□□□□ -0.47
NELFCD-201ENST00000460601 LINC00614P0C842 121 aa12.1□□□□□ -0.47
NELFCD-201ENST00000460601 Q6ZTI0 123 aa12.1□□□□□ -0.47
NELFCD-201ENST00000460601 BAGE3Q86Y29 109 aa12.1□□□□□ -0.47
NELFCD-201ENST00000460601 ORMDL3Q8N138 153 aa12.1□□□□□ -0.47
NELFCD-201ENST00000460601 CBY1Q9Y3M2 126 aa12.1□□□□□ -0.47
NELFCD-201ENST00000460601 PRELID3AQ96N28 172 aa12.09□□□□□ -0.47
NELFCD-201ENST00000460601 U3KQK5 164 aa12.09□□□□□ -0.47
NELFCD-201ENST00000460601 NACAE9PAV3 2078 aa12.09□□□□□ -0.47
NELFCD-201ENST00000460601 TRGV1A0A0A0MS02 117 aa12.08□□□□□ -0.47
NELFCD-201ENST00000460601 DEFB4AO15263 64 aa12.08□□□□□ -0.47
NELFCD-201ENST00000460601 C16orf74Q96GX8 76 aa12.08□□□□□ -0.47
NELFCD-201ENST00000460601 SMIM17P0DL12 118 aa12.08□□□□□ -0.48
NELFCD-201ENST00000460601 Q0VG73 95 aa12.08□□□□□ -0.48
NELFCD-201ENST00000460601 OR10J3Q5JRS4 329 aa12.08□□□□□ -0.48
NELFCD-201ENST00000460601 URB1-AS1Q96HZ7 61 aa12.08□□□□□ -0.48
NELFCD-201ENST00000460601 LOC389332A0A1B0GUA5 103 aa12.07□□□□□ -0.48
NELFCD-201ENST00000460601 POM121L12Q8N7R1 296 aa12.07□□□□□ -0.48
NELFCD-201ENST00000460601 OR11H2Q8NH07 326 aa12.07□□□□□ -0.48
NELFCD-201ENST00000460601 RPL39LQ96EH5 51 aaKnown RBP12.07□□□□□ -0.48
NELFCD-201ENST00000460601 MIEN1Q9BRT3 115 aa12.07□□□□□ -0.48
NELFCD-201ENST00000460601 SPXQ9BT56 116 aa12.07□□□□□ -0.48
NELFCD-201ENST00000460601 RETNQ9HD89 108 aa12.07□□□□□ -0.48
NELFCD-201ENST00000460601 F5H697 171 aa12.06□□□□□ -0.48
NELFCD-201ENST00000460601 ESDP10768 282 aa12.06□□□□□ -0.48
NELFCD-201ENST00000460601 CFAP126Q5VTH2 177 aa12.06□□□□□ -0.48
NELFCD-201ENST00000460601 TEX43Q6ZNM6 134 aa12.06□□□□□ -0.48
NELFCD-201ENST00000460601 RASL10AQ92737 203 aa12.06□□□□□ -0.48
NELFCD-201ENST00000460601 TNFRSF6BO95407 300 aa12.05□□□□□ -0.48
NELFCD-201ENST00000460601 RIPPLY3P57055 190 aa12.05□□□□□ -0.48
NELFCD-201ENST00000460601 ZNF56Q15929 161 aa12.05□□□□□ -0.48
NELFCD-201ENST00000460601 SUMO4Q6EEV6 95 aa12.05□□□□□ -0.48
NELFCD-201ENST00000460601 NRACQ8N912 160 aa12.05□□□□□ -0.48
NELFCD-201ENST00000460601 A8MZ25 164 aa12.04□□□□□ -0.48
NELFCD-201ENST00000460601 IGHV3-53P01767 116 aa12.04□□□□□ -0.48
NELFCD-201ENST00000460601 IFI27P40305 119 aaPredicted RBP12.04□□□□□ -0.48
NELFCD-201ENST00000460601 DAZ2Q13117 558 aaKnown RBP12.04□□□□□ -0.48
NELFCD-201ENST00000460601 RNASEKQ6P5S7 137 aaKnown RBP12.04□□□□□ -0.48
NELFCD-201ENST00000460601 GAGE12BA1L429 117 aa12.04□□□□□ -0.48
NELFCD-201ENST00000460601 GAGE7O76087 117 aa12.04□□□□□ -0.48
NELFCD-201ENST00000460601 GAGE12FP0CL80 117 aa12.04□□□□□ -0.48
NELFCD-201ENST00000460601 GAGE12GP0CL81 117 aa12.04□□□□□ -0.48
NELFCD-201ENST00000460601 GAGE12IP0CL82 117 aa12.04□□□□□ -0.48
NELFCD-201ENST00000460601 PMCHL1Q16048 86 aa12.04□□□□□ -0.48
NELFCD-201ENST00000460601 UFSP1Q6NVU6 142 aa12.04□□□□□ -0.48
NELFCD-201ENST00000460601 Q6ZSN1 163 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms